Homarus americanus (American lobster): 121863331
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Entry
121863331 CDS
T07477
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03022
Basal transcription factors
hame03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121863331
09124 Replication and repair
03420 Nucleotide excision repair
121863331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121863331
03400 DNA repair and recombination proteins [BR:
hame03400
]
121863331
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121863331
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121863331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GRAM
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
121863331
NCBI-ProteinID:
XP_042217889
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MSGEREDILLQMNNVRYKKDNGQLYLSQTRVGWLMDESDTSTVSVPYNDIRTQKISPEGK
PKVQLQLVLHDMSSYTFHFCTPEGRDKQVAERNQVKERLSQLMTQNRRQPPNDLMEKKRM
LDENEQLHHLYRALVPTSIISVDEFWKEIAGQYMGEHSSPMADIKPQTDGNNGKVQYNLT
PEIMSSVFKTYPAVKKKHIEYVPHRMTESEFWTLFFQSHYYSVHTTSRIENVFSECSKHD
DREWNRDVSSTQNDPLHALNDIYDEKPMSTESDLRVAGVKAGSNVFHALMIKRFNQHSLN
IIKSQTHSEKEKVLDELAAKNPNGIPNGEVKQDIQVQKSKRARLEEKLVYDDLENVNKVE
TSSLTIHQRDRYLTGPTEYSTTHSLPPRQVSAFMSS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagaaagagaagacattcttcttcagatgaacaatgttcgctacaaaaaggac
aatggtcagctgtacttgtctcagacacgagttggctggttgatggacgagtcagatacc
tccacagtgagcgtcccctacaatgatatcagaacccaaaaaatctcacctgagggtaaa
ccaaaagttcaactccaattggttctccatgatatgtcctcctacacattccacttctgc
actccagagggcagagacaagcaggtggctgagaggaaccaagtcaaggagcgcctgagt
cagctgatgacccaaaacagacggcagcctccaaatgacttaatggagaagaaacggatg
ttggacgagaacgagcagctccaccacctgtaccgtgcactggtccccacctccatcatc
tctgtggatgaattctggaaagagattgcaggacaatacatgggggaacattcttcccca
atggcagatataaaacctcagactgatggcaataacgggaaagttcagtacaacttgact
ccagagattatgtcctccgtgttcaaaacttatccggcagtgaagaagaaacatatcgag
tacgtccctcacaggatgaccgaatctgagttctggacactgtttttccagtcccattat
tacagcgtgcatacaaccagccgcattgaaaatgtattctcagaatgctcaaaacatgat
gacagagaatggaatcgtgatgtcagctcaacacaaaatgatcctttacatgctttaaat
gacatctacgatgaaaaacccatgtctacagaaagtgatctgagagttgccggtgtcaaa
gccggaagtaacgtctttcatgccttaatgatcaaaagattcaaccaacacagtctcaac
attattaaatcacaaacacattctgaaaaggagaaggtgttggatgagctcgcagcaaaa
aacccaaatggaattcccaatggtgaagtaaaacaggacattcaagttcagaaaagtaaa
agggctagattagaagaaaaattagtttatgatgacttggaaaatgtcaacaaagtggag
acatcctcattaaccatccaccaaagagaccgctatcttacaggacccacggaatacagt
accacccatagtttaccaccacgccaggtctctgcctttatgagcagttaa
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integrated database retrieval system
