Homarus americanus (American lobster): 121863419
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Entry
121863419 CDS
T07477
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hame03016
]
121863419
Enzymes [BR:
hame01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
121863419
Transfer RNA biogenesis [BR:
hame03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121863419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Motif
Other DBs
NCBI-GeneID:
121863419
NCBI-ProteinID:
XP_042218011
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MESNKTCLFYVKRKKRYCKMLVRAGQQYCGQHLVEEHVNEETIHLKRIPCPLDPKHSCYE
HRLKHHLAICNAREVTGLPYVNHNINLRIGDTKEPPKISLSSLSDQELLSFIAKVEAAHM
EHIDNIEESILSHHTLEKEIEAPGCGPSIMRHLSQNSSILGHLELAGLLNTSFTPTCYVE
FGAGRGQLTRWLTEAVSDTSKALFVLVDRGAQRYKFDAKLKYK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaacaaaacctgccttttttatgtcaagcgcaaaaagaggtactgtaagatg
ttagtgagagctggacagcaatactgtgggcagcacttggttgaagaacatgttaatgag
gaaactatccatctcaagagaattccttgtccactagatccaaaacactcctgttatgaa
catcggctaaagcatcacttagcaatttgtaatgcccgggaggtgactggcttgccatac
gtgaatcacaacattaacctcagaattggtgacaccaaagaacctcccaaaatctctcta
tcttcactgtcagaccaagagttgttatccttcatagcgaaggttgaggcagctcacatg
gaacacattgacaacattgaagaatccatcttgagtcatcataccctggagaaagaaata
gaagctccaggctgtggtcccagtataatgcgacacttgagtcaaaattcctcaattctt
ggtcatttagagctggctggactactcaacacatccttcacacctacttgttatgttgag
tttggtgctggacgaggtcagctgacacgctggttaacagaggctgtatcagataccagc
aaagctctatttgtgctagtggacagaggagcccagagatacaagtttgatgctaaactg
aagtacaagtaa
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