Homarus americanus (American lobster): 121864119
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Entry
121864119 CDS
T07477
Name
(RefSeq) transient receptor potential protein-like isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hame04040
]
121864119
Ion channels [BR:
hame04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121864119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_5
Ank_3
Ank_4
DUF565
DUF884
Motif
Other DBs
NCBI-GeneID:
121864119
NCBI-ProteinID:
XP_042218970
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MGAKKRQKEDSSNTLDVAASPPDRTESPNILTKIQQDLDDLDKDELEQILNDEEKRFLLY
VERGDVASVMHILKKAKKENQKKVGAFNINCLDPLGRSALIISIENENLEMVELLLSEKI
EPKDALLFSIAEEYVEGVETLLAHEESTHKPGEPYSWELTNFERTNFTPDITPLILAAHK
NNYEILKLLLDRGATLPMPHDVKCACDECIEASDEDSLRHSHSRINAYKALSSPSLICLS
SKDPLLTAFTLSEDLNNLASMENEFMDEYTSLREKVQEFSMALVDETRTTTELEIILNYD
PEGEPYRRGDFMHLARLKEAVSNNQKSFVAHANVQQLLGRVWYDGMPGFKRRTLLQQLLE
IFKIGCIFPVYCLAFLFVPNSSYTNAMKKPFIKFIIHSSSYCTFLLLLVIVSLRLETLVI
ELFGNEWMLQRLEQYEREARGGFPSLVEVLIVIFVFGFIWGEMTTLWEDGLTEYIKDLWN
IVDFITNFFYMNWIFLRLTAYFLTQRAMWQDHDPYFPREMWPDFDPMLISEGMFGAGNIL
SFLKLVHIFSVSPHMGPLQIALGRMVIDIIKFFFIYTLVLFAFGCGLNQLLWYYADMDKA
KCYSLPGDQKNPKEDQSCAVWRRFSNLFETSQSLFWASFGLVDLQVFELTGIKSYTRFWS
MLMFGSYNVINVIVLLNLLIAMMSNSYAFICAKCDMEWKFARAKLWMSYFEEGREMPAPF
NLVPKFSSLLALNKGKSRASFKKRQETLRETQYQGVMRNLVRRYVTAEQRKSEERLINED
DINEVKQDITSFKYELMDILRMNNWKLGTHKTDGLSAMGKKHQARERRLMKGFNIGLVEG
LDATIAAGVQKSLSIFTNLHLKNKKKKDWNQMVRTRSERRDHIGSSKTSIQRQTLRVCTR
QNSKTWKAVQFYQKRGVFMGGEINPTMLNEVTKSRQSESDIVQRYGRGWCVLHNLRAKGE
MTRDGLQARINESSSSGKSSPTNLSASPKRPVPNGSPGKPAAKSKSVLTKPSESPRPVGT
KPNESAISKPTDTSKPPVTKPTEAPKPPVTKPAEPVTKPTDTSKPPVTKPAETPKPPVTK
PIETPKPPVTKPAEPVTKPTDTSKPPVTKPAETTKPPMTKPTEAPKPPVTKPTETPKPTV
TKPTETPKPPVTKPAEASPKPAAPTTPGRSAATPLKASPVSQPSTPYPATPTPEPLVSGV
SLVTKQKRTGWL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgaaaaaaaggcaaaaagaggactccagcaacaccctggatgtggcggcttct
cctcctgatcgaactgagtcacctaatattctgaccaagattcagcaggacctcgacgac
ctggacaaagatgagctggaacagatcctcaacgacgaggagaagcgattcctcctgtat
gtggaacgtggcgacgtagcctctgtcatgcacatactcaagaaggccaagaaagaaaat
cagaagaaagtgggcgccttcaatatcaactgcctggaccctctgggacgctccgctctt
atcatctccatcgagaatgagaacttggagatggtagaactgctgctgagtgagaaaatt
gagccaaaggacgctctgctgttttctatcgctgaggagtacgtggagggggtggaaacc
ctcttggcccacgaggagtcgacccataaaccaggagaaccctactcgtgggagctaacc
aacttcgagaggacgaacttcaccccggacatcacaccgctcatcctcgccgctcacaag
aacaactacgagattctcaagttgctactggaccgtggcgccaccctgcccatgccccac
gatgtcaagtgtgcctgtgacgaatgcattgaggctagtgatgaggactccctcagacat
tcccactcgagaatcaacgcgtacaaggctctctcgtctccgtccctcatctgcctttcc
agcaaggatccgctcctcactgcctttaccctgagcgaggacctcaataacctggccagc
atggagaacgagtttatggacgagtacacgtccctgagggagaaggtgcaggagttttca
atggcgctggtggacgagacccgaaccacaaccgaactggagataatattgaactacgac
cctgaaggtgaaccgtacaggcgaggtgacttcatgcacctcgccaggcttaaggaggca
gtcagcaataaccagaaatcgttcgtggcccatgccaatgtacaacagctgttgggccga
gtgtggtacgacggtatgccggggttcaagcgacgtaccctcctgcagcagctcctggaa
atcttcaagataggctgcatcttccccgtgtactgcctcgccttcctcttcgttcccaat
tcctcctacaccaatgctatgaagaaacctttcataaagtttattatccactcatcctcc
tactgtaccttcctcttactgctggtcatcgtatcgttacgtctggaaacgctggtgatc
gagctctttggtaacgagtggatgttacagcggctggaacagtacgagagggaggcacgg
ggtggctttccctccttggtggaggttctcattgttatcttcgtcttcggcttcatatgg
ggcgagatgacgacgctgtgggaagatggcctcactgagtacataaaggacctctggaac
atcgtcgacttcatcaccaactttttctacatgaactggattttcctgcggctgactgca
tatttcctgactcagcgggcgatgtggcaagatcatgacccctactttccgcgagaaatg
tggcccgacttcgatcccatgcttatatctgaagggatgtttggtgctggcaacatcttg
agttttctgaagttggtacacatcttcagcgtcagcccgcacatggggcctctccaaatc
gctcttggcaggatggtgatcgacattatcaagttcttcttcatctacacgctcgtgctc
tttgccttcggctgtggtctgaaccaactgctgtggtattatgcggatatggacaaggcc
aagtgctactccctccctggtgaccagaagaaccccaaagaagaccagtcttgtgctgtt
tggcgaaggttttcaaacttgtttgagacgtctcagtcgctgttctgggcatcgtttggg
ctggtggacctgcaggtgtttgagttgacagggatcaagtcatatactaggttctggagt
atgctcatgttcggctcttacaatgtgatcaacgtgatcgtcctcctcaatctgcttatt
gctatgatgtccaactcttacgccttcatctgtgctaagtgtgacatggagtggaagttc
gctcgggccaagttgtggatgagttattttgaggagggacgcgagatgcccgcacccttc
aacctggtgcccaagttcagttccctcttggcactcaataagggtaaatcccgggcgtcc
ttcaagaagaggcaagaaactcttcgtgagactcagtatcagggggtgatgaggaacctg
gtacggcgatacgtgaccgcggaacagcgcaagtcagaggaacgactcatcaacgaggat
gacatcaatgaggtgaagcaggatatcacttccttcaagtatgaactcatggacatcctg
aggatgaataactggaagcttggcactcacaagactgatggcttatctgctatgggcaag
aaacaccaggcaagagagcgccggctgatgaagggcttcaacattggtctggtggagggt
ctcgacgccactatcgcggccggtgtccagaagtccctcagtatcttcactaacctccac
ttaaagaacaagaagaagaaggactggaaccagatggtccgtacgcgctcggagagacga
gatcatatcggctccagcaagacgagcattcagcgccagacactacgggtctgtacgagg
caaaacagcaaaacttggaaagctgttcagttctaccagaagcgtggagtgttcatggga
ggagaaatcaaccctacgatgctcaacgaggtaacgaaatctcgccaatcagaatcggat
attgtacagagatacggtaggggctggtgtgtgctgcacaacctccgcgccaaaggtgag
atgacacgtgatggcctgcaagcacggattaatgagagttcatcgtctggtaaatcctcc
cccaccaacctctccgcatcgccaaagagaccggttccaaatggctcgccgggcaaacct
gctgcaaagtcgaaatcagtgttgacgaaaccatcagaatcacctagaccagtgggaact
aagccaaatgaatcagctataagtaaaccaacggatacatctaagccaccagtgactaag
ccaactgaagcgcctaaaccaccagtgactaagccagctgaaccagtgactaaaccaacg
gatacatctaagccaccagtgactaagccagctgaaacacctaaaccaccagtgactaag
ccaattgaaacacctaaaccaccagtgactaagccagctgaaccagtgactaaaccaacg
gatacatctaagccaccagtgactaagccagctgaaacaactaaaccaccaatgactaag
ccaactgaagcgcctaaaccaccagtgactaagccaactgaaacaccaaagccaacagtg
actaagccaactgaaacaccaaaaccaccagtgactaaaccagctgaagcatcacctaag
ccagcagccccaacaacacctggaagaagcgcggcaacaccactaaaagcttccccagtc
tctcaaccatcaacaccttacccagcgacaccaacgcctgagcccctggtgtctggagtg
tcgctggtcaccaagcagaagagaactggatggctgtag
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integrated database retrieval system
