Homarus americanus (American lobster): 121864483
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Entry
121864483 CDS
T07477
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121864483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hame04121
]
121864483
Enzymes [BR:
hame01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121864483
Ubiquitin system [BR:
hame04121
]
Ubiquitin ligases (E3)
HECT type E3
121864483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
121864483
NCBI-ProteinID:
XP_042219453
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MYCWGSAVNGELGVGAPEVEQLILPTFMDFSKAWNVKQVAAGLMHSLILTEEGLVYSCGN
NEMGQLGHNKLTRTPEQIDDLQNYSIIQVAAGDQHSAALTSWGLIYVWGENGFGQLGINS
TEPHIHAPKLVKSLARKQTVQIACGCNHTLALTSEGELYSWGQNNLGQLGLGHKDGPQND
PTLIKSLVGTPMVHITAGGHHSAVLTQAGYLLMWGSNKHGQLGYTPKKDPNFSELPKPVP
NLSSYSEPLLYVALGEGHTAVLDSNGKLWTFGYGRYGQLGHGTNEDGSIPRTVLDMCGSK
ISQVACGRCHTVVYIPSQGQLYAFGQGMSGQLGIKTPHNRNLPQVVVGPWLTPSGVSLMD
TDEEEEIQKIYIKKIFAGGDTTMATVMKESGTADSYCVKHPSELPLKIEEAKINQMIGID
EEDIIDDDLFSYMETVFGSLASWNCCFIMEAADKHGHGLDYRVAEEYMGKLGRMPRESIQ
EVIENSVENITNDLPRHPLTPESLRCFILLPLYKSFLDARHMAKLQLPYAEAFLNLQEDM
AAVLKLWIKVLPRDFVIHLLNIYKLVIVQILNNAKQSSEIDRRALLSSLKILGVLHGENF
KHGAKAARLSYEDFYIPEIAEKIDIRADYLNWISSKVRPTVRKDIPISFCEYPFLFDAQA
KTLLLRSDATRQMQGAIQEAVINSNPMLWLFDPAQVQFLNINIHRNNIVEDTINQLLHHG
VTDYKRPLKVRFIGEEAEDAGGVRKEFFLLLLREILNPDYGMFTENPETYTIWFKEGSLE
AAATYSLIGIVCGLAIYNFTIINLPFPLALYKKLLGQPVGLDDLADMDPVLTRSLYELLE
HEGNDVEDIYYLNFATTQDFFGKTETIPLKPDGENIPVTSQNKQEYVDLLVDYKLNKSIE
TQYKAFHDGFYRVCGCIVLELFQPMELMSLVIGNENYNWIELEKNTEYKGEYYADHTVVK
MFWEVFSDMSLDQKKKFLVFLTGTDRVPILGMKTVKMIIQSTADDSFLPVAHTCISQLDL
PKYSTKEKLRFKLLQAIQQSEGFGLV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtattgttggggatcagcagtgaatggagagctgggtgtgggggccccggaagttgag
cagctgatacttccaacttttatggacttttcaaaagcatggaatgtcaaacaagttgct
gcaggtctgatgcattccctgatcttgactgaagagggtctagtatactcctgtggcaac
aatgaaatgggtcagctgggacacaacaagctcaccaggacaccagaacaaatagatgat
ctacaaaactacagtatcatacaagttgcagctggggatcaacactcggcagcacttaca
tcttggggactgatttatgtatggggagaaaatggatttggtcaactgggaattaattca
actgaaccacatattcatgcaccgaagttggtgaagagtttggcacggaagcagactgtg
cagattgcatgtggatgtaatcatactctagctcttacttcagaaggagaactttattcc
tggggtcagaataatttgggtcagcttggcttgggtcacaaagacggacctcaaaatgac
ccaactcttatcaaatctcttgttgggacccccatggttcacataactgcaggaggacat
cactctgctgtcctcactcaggctggctacttgcttatgtgggggtcaaacaagcatggt
cagttgggttacactccaaagaaagatccaaattttagtgaattgcccaaaccagttccc
aatttatcatcttactctgaaccactgctgtatgttgcgcttggggagggtcacactgct
gttctcgactcaaatggaaagctttggacatttggatatggtcgttatggacaacttggc
catggtacaaatgaagatggaagcatccctcgcacagtacttgacatgtgtgggtcaaaa
atcagtcaagttgcatgtggtagatgtcatacagttgtgtacatcccctctcagggtcaa
ctttatgcatttggacaaggaatgtcaggtcagttagggattaaaacgccacacaatcgc
aatttaccccaggtggtagttggaccatggctcacaccaagtggagtcagccttatggac
accgatgaggaagaagaaattcaaaaaatttacataaagaagatttttgctggtggagat
acaaccatggctacggtaatgaaggaatctgggactgctgacagttactgtgtgaaacac
ccatcagaactacctttaaaaattgaagaggcaaagataaaccagatgataggaattgat
gaagaggatattattgatgacgatttattttcgtatatggaaactgtatttggatccctg
gcaagctggaactgttgttttataatggaagctgctgacaagcatggtcatgggcttgat
tacagagtggcagaagagtacatgggaaaacttggaaggatgcctcgagaatccattcag
gaagttattgaaaatagtgtcgagaatatcacaaatgatcttcctcgtcacccattaact
ccagagagtctccgctgctttattcttcttcccctctataagagcttcttagatgctcgg
cacatggccaagttgcagttgccatatgcagaggcatttttgaatttgcaggaagacatg
gctgcagtattaaagctctggataaaggttttacctcgggactttgtcattcatctcctg
aatatctacaagttggttatcgttcaaatactgaataatgccaaacaatcatctgagatt
gacaggcgtgctttactatcatctctaaagatattaggcgtcttgcacggagaaaacttt
aagcatggagctaaagcagctagattatcttatgaggatttctacatccctgaaattgct
gaaaagattgacattcgagctgactatttaaattggatcagtagcaaagtcagaccaact
gttagaaaggatattccaatttcgttttgtgagtatcctttccttttcgatgctcaggct
aagacgctgctacttcgttctgatgctacaaggcagatgcaaggggccattcaagaagca
gttatcaacagtaacccaatgttgtggctgtttgaccctgcacaagtacagttcttgaat
atcaatattcatcgtaacaacattgttgaagacactatcaaccagttgcttcatcatgga
gtcactgattacaaaagaccacttaaggtacgatttattggtgaagaggcggaggatgct
ggaggtgtgcgtaaggagttctttcttctccttttgcgtgagatacttaatccagactat
ggcatgttcacagagaacccagaaacatacaccatttggttcaaagaaggatctctggaa
gctgctgctacatatagtcttattgggattgtgtgtggacttgccatttacaatttcacc
atcataaatcttcctttccctctggcactctacaaaaagttacttggtcagccggttggc
cttgatgatcttgcagacatggatccagttcttacaaggtcactatatgagttgctggag
cacgaaggcaatgatgtagaggatatctactacttaaactttgccaccacacaggatttc
tttggtaaaactgaaaccattccactcaagccagatggagagaacattcctgttacttca
caaaacaaacaggagtatgttgatcttcttgtagactacaagttgaacaagagcatagag
acccagtacaaggcatttcatgacgggttttaccgtgtgtgtggatgtatagtactcgag
ctcttccagccaatggaattgatgtcccttgtcattggtaatgaaaactacaattggata
gagctggagaagaatacggaatacaagggtgaatattatgcagatcacacagtcgtcaag
atgttctgggaagtgttctccgatatgtcacttgatcagaagaaaaaatttcttgttttt
ttaactggcactgatcgggtacctattttgggcatgaagactgtgaagatgattatacag
tctacagctgatgattccttcctcccagttgcccacacatgcatttctcagctggacttg
cctaagtacagcacaaaggagaagctacgatttaagctattgcaagctatacagcagagt
gaaggctttggccttgtgtag
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