Homarus americanus (American lobster): 121864529
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Entry
121864529 CDS
T07477
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 4A-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hame03000
]
121864529
Transcription factors [BR:
hame03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121864529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
bHLH_NPAS4
PAS
Motif
Other DBs
NCBI-GeneID:
121864529
NCBI-ProteinID:
XP_042219535
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MADPRATEAFDGTKSTKGASKMRRDMINXQVCQLRDLLPSSTRQLFKQQNRPQPHPNIGF
SKAMNGFIMMLTQGGKLLYISDNAAEYLGHSMEDLLIHGDSVYDIIDKQDHAAVQAELVR
TGHTSQHHHDDDRLFLCRMNVSRNARRQMRFGDQKVRTFVYDYLSYLPLCSRNEPXFLAH
CTPVAMPETRESVVQGATNVFTSVHTLDMKFINLDRNGEFYLGYSRSSLAGVSWYHLLHP
ENMREAQTKHRLITTSEQDRSCILLVRLQAAGGTWRWVHCVLQVKDATDSSQQGAQHTST
TTTTTTSSSNNSSSSSSNTSSSTQQQQQPVIVATNQVLGEKEAAVLRANSWLYHYYTMQS
KLQYGLAYDAHAQRVHAYYPQVMTYQTDPATSYMAPTGLNGAHGHSHTPSTHTPYSLATP
SAYAHLQHYHHHYSVRLQHGLDYSRDPAWGYYDTAHASTDTHTPLHNHATTHTPRSSKKS
SSPNSSPRRSPLTPLSAHGVCESGGGVAVATPVAVRAAPAVHKGAASPELEQHLEAPWKA
SPTQEVPDYPEYSTYITPPYSAATPTKLNVFTFDPIDPREVNVGRDQRVPSLEAGELPSW
TTDAPTKISAWLPTLDDTTVPLRPLHPAAL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccaagggccaccgaggcttttgacggcaccaagtcgactaagggcgcctcc
aagatgcgtcgggacatgatcaatnngcaggtctgtcagctgagggacctcctgccctcc
tccacccgtcaactgttcaagcagcagaacagacctcagcctcaccccaacatcggtttc
tccaaggctatgaacggcttcatcatgatgctgacccagggagggaagctgctgtacatc
tcagacaacgctgccgagtacctgggccactctatggaggacctcctcatacacggggac
agtgtgtacgacattatagacaagcaggaccacgcggcggtacaggcggagctcgtcagg
acaggtcacacgtcccaacaccaccatgacgatgaccgactcttcctctgtcgcatgaac
gtgtccaggaacgcccgaagacagatgaggttcggcgaccagaaggtgagaacgtttgtt
tatgattacctgtcgtacctgccgctgtgctccaggaacgagccanntttcctcgcccac
tgtacgcccgtcgccatgccagagacccgagagagcgtcgtgcagggcgccaccaacgtc
ttcacctccgtccacaccctcgacatgaagttcatcaacctcgacagaaacggtgagttc
tacctagggtacagccggtcgtcgctggcaggagtgtcgtggtaccacctcctacaccct
gagaacatgagggaagcgcagaccaaacaccgcctcatcacgacgagtgagcaggacagg
tcgtgtatcctgctggtgaggctacaggctgcaggaggcacgtggcgttgggtccactgt
gtcctgcaggtgaaggacgccaccgactctagccagcagggggcgcagcacacctccacc
accaccaccaccactaccagcagcagtaacaacagtagcagcagcagtagcaacaccagc
agcagcacacaacagcagcagcagccagtgatcgtggccactaaccaggtgttgggagag
aaggaggcagccgtcttacgggccaactcctggctctaccactactacaccatgcagtcc
aaactacagtatggcctcgcttatgatgcccatgcccagcgtgtgcacgcctactacccc
caggtcatgacctaccagactgacccggcgacctcctacatggcgcccacaggccttaat
ggtgcccacggccacagtcacacccccagtacccacaccccgtactccctggccacgccc
tcagcctacgcccacctgcagcactaccaccaccactactcggtgcgtctccaacacggt
ctcgactactcccgtgaccccgcctggggttactacgacaccgcccacgcctccacggac
acccacacgcccctccataaccacgccaccacccacacgcccaggtccagtaaaaagtct
tcctctcccaattcttcgccgcgtaggtcgccgctgacgccgctgtcagcacacggagtg
tgtgagagcggcggcggagtggcagtagcgacgcccgtggcggtgcgggcggcaccggca
gtacacaagggcgcggcgtccccggagctggagcaacacttggaggcgccgtggaaggcg
tcgcctacacaggaggtgcccgactaccccgagtactccacctacatcaccccgccctac
tccgccgccacgcccaccaagcttaacgtcttcacctttgaccccatagacccgcgggag
gtgaacgttgggcgggaccagcgggtgccttcacttgaggctggggagctgccctcttgg
accacagacgcccctaccaagatcagcgcctggctacccacactggacgacaccacagtg
ccgctcaggccgctacacccggcggccctctga
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