Homarus americanus (American lobster): 121864678
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Entry
121864678 CDS
T07477
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04140
Autophagy - animal
hame04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121864678
04148 Efferocytosis
121864678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hame04131
]
121864678
Membrane trafficking [BR:
hame04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121864678
Hops complex
121864678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
zf-rbx1
zf-RING_Vps41
zf-RING_5
zf-RING_2
zf-C3HC4_2
Clathrin
PspA_IM30
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING_11
COG4_N
zf-RING_UBOX
DUF1664
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
121864678
NCBI-ProteinID:
XP_042219766
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MATLFDQYESLQYGVGGGPMHSILGTTTFRNQKLEEEAAIFLKDRQVNFCPTHPISHLVV
SNHHLVLAMANKKLIRINLIHPNAGTIEDQEVDISKFALQAKIHNIFLDPTGQHLLISIV
SRDGSTPVDTLYLPLRTNKPKSTSKLKGHLVTAVGWNQRNQSDSVTGPILIGTGRGVILE
TELTSDERFFQSSHEEYCKQVFDIGKDVPVTVTALEVRSSPVDELKFLVLCTTPDKLYQF
SGRVKSLEERPMLMSVFSNYLGLPPRFVELPSKWKSSWLQLYHPPNSSTPKHFAWLSEQG
VYTGDIVWGGAPDDMTINKRLHANPEGMEGIGIPCGMIVCEFHVLVVWPDKIRGLCILNN
QVVFEGTVPEECGKLIGISKDLVKGTIWIYAERGVFKYKVDREGRNVWRIYLDQGNYELA
KKHCNSDPSCLSVVLLQEAQDLFQKEEYLQSAMLFAKTLTSFEEISLKFVEVEEEEALKV
YLHEKLDALKVSEQTQVTLVVMWLLELYLKQLGNLRDAGKENTQEYSNYNEHLKSLLHDP
KVLQCVTNNATAIYELLSSHDDQDNYISVSLMLKDYDRVLLHLMGHGRYIEALDVMSTRG
SEQLFYQHFPALLQAAPSAAVDALILQGRRINSIKLLPSLVHCHTSHGSGAEILRYLEYC
VDKLEVTDEVLHNFLITLYAAEAPDKLLPYFKLQGDDSQSVHYDVKFALRECMSVGEDKA
CVHILTTMGLYQEAVELALKLDTSLAKATANRPKYDQDLRKKLWLMIAAHVVQEEQNVSR
AMEVLKECDLIKIEDILPFFPDFVTIDQFKDAICSSLQEYNQHIEDLKQEMDDASKAAEN
IRKDIQKFKQKFSRVHAQDRCCECNYPLLTRPFYLFPCSHKFHQDCLSDSVMGYLSEAKQ
KKVSELKGKLLALSNDESGASTGATGVWGDREQIRADIDNLVAGECLYCGDNVVANIDTP
FISNRDWDALMAEWQ
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctatttgaccagtacgaatccctccagtatggggtgggtggaggtccaatg
cattccatacttggcaccacgacgtttaggaaccagaagttggaggaggaagcagcaata
tttttgaaagaccgccaagtgaatttctgtcccacacatccaatttctcatttggttgta
tctaaccatcacctggtcttggctatggcaaacaagaagttaataagaataaatttgatt
caccctaatgctggcactatagaagatcaagaggtggacattagcaagtttgccttgcaa
gcaaaaattcacaacatctttcttgaccctacaggacaacatctgttgatcagcattgtg
agtagggatggatcaacacctgtggacacactttatttacctttacgcaccaacaaacct
aagtcgacgagcaagctgaaaggtcatcttgtaacggcagttgggtggaatcagagaaac
cagtcggatagtgttacaggaccaattttgattggaacaggaagaggagtgattttagaa
actgaactcacttcagacgaaagatttttccagtcgagccatgaggagtactgcaaacaa
gtcttcgacattgggaaggacgtgcccgttactgtaacagcattagaagtccgtagcagt
ccagtggatgagctgaagtttcttgtcttgtgtactacaccagacaagctttatcagttt
tctggccgtgtaaagtctttggaggagaggccaatgcttatgtctgttttcagtaattat
ttgggattgcctccaagatttgtagaattaccaagcaaatggaaaagttcgtggctccag
ctgtatcatcccccaaattcttcaaccccaaaacactttgcttggctgtctgaacagggt
gtgtacactggtgatattgtttggggtggagcgccagatgatatgaccatcaataaaaga
ctccatgcaaacccagaagggatggagggtattggtattccctgtggtatgattgtttgt
gaatttcatgttcttgttgtgtggcctgataagatacgtggactgtgtattcttaataat
caggttgtgtttgagggtacagttccagaagagtgtggaaaattgattggcatatccaaa
gatttggtgaaaggaactatttggatttatgcagagagaggtgttttcaagtataaagtt
gatcgggaaggacggaatgtgtggcgaatatatttagaccagggaaattatgaattggca
aagaaacattgtaattcagacccatcatgtttatctgttgtactgttgcaagaggcccaa
gatctttttcaaaaggaagaatatcttcagagtgcaatgctttttgctaaaacattaact
tcatttgaagaaataagtttaaagtttgttgaggtagaagaggaggaagccctcaaggtc
tacttgcatgaaaagttggatgccttaaaagtgagtgaacaaactcaagttactcttgtt
gtgatgtggttacttgagttgtacctgaagcaattaggaaacttacgtgatgcagggaag
gagaacactcaggagtactccaactacaatgagcaccttaaatcactccttcatgatcca
aaagtacttcagtgtgtgacaaacaatgctactgctatttatgagttgctctcttcacat
gatgatcaagataattatataagtgtttctttgatgcttaaagactacgatcgagtgttg
cttcatcttatgggccatggacgttacattgaggcccttgatgttatgtcgaccaggggg
tctgaacaacttttttatcaacattttcctgctcttttgcaagcagcaccaagtgctgca
gtagatgcattaattttacaaggtagaaggataaattccataaaattactaccgagcctt
gttcattgtcacacttcacatggcagtggagcagagattcttcgttatttagaatactgt
gttgacaaactagaagtcactgatgaagttttgcataatttcttaataactctttatgct
gctgaggctccagataagttattgccttatttcaaactgcagggggatgacagccagagt
gtccattatgatgtcaaatttgcccttagagaatgtatgtctgttggggaagacaaggcc
tgtgtgcacatccttaccactatgggtctttatcaagaggctgtagaattggctctgaag
ttagatacgtctttggcaaaggcaactgcaaaccgtcccaagtatgaccaagatttgagg
aagaagctttggctgatgattgctgcacatgtggtacaggaagaacagaatgtgtctcgt
gccatggaggtcctgaaagaatgtgatcttataaaaattgaggatatacttccctttttc
ccagactttgttacaattgaccagtttaaagatgctatctgctcatctcttcaagaatat
aaccagcacattgaagatcttaaacaagagatggacgatgcatctaaagcagcagaaaat
atccgtaaagatattcagaagttcaagcagaagttttctcgtgtacatgcacaagatcgt
tgttgtgaatgtaactatccccttctaactagaccattttacttgtttccttgctctcac
aagttccatcaagactgtttgtcagattcagtaatgggctatcttagtgaagcaaaacaa
aagaaagtttcagagttgaaggggaaacttttggctctatcaaatgatgagagtggagct
agtactggtgctacaggtgtatggggtgatagggaacagatcagagcagatatagataac
ttggtggcaggagaatgcctctactgtggtgacaatgttgtggcaaatattgacacacca
tttatcagcaatcgggactgggatgctctgatggctgaatggcagtaa
DBGET
integrated database retrieval system
