Homarus americanus (American lobster): 121864999
Help
Entry
121864999 CDS
T07477
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hame03041
]
121864999
Enzymes [BR:
hame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121864999
Spliceosome [BR:
hame03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
121864999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
CMS1
AAA_22
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
121864999
NCBI-ProteinID:
XP_042220199
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MAQRKAHKLEDKERTDDIHIEENVDFAGMYLAEHVLAGLKSAGFGKXPIQLAAIPLGRCG
LDLIVQAKSGTGKTCVFTVIALEMISVSAPSTQVLVIAPTREIAVQITQVINAIGSTMPQ
LRAATFIGGILLNQDKAKLRCCHIAVGTPGRLTQLVELGLLKLENVRLLVLDEADLLLTG
QFTKAVVHLASGLPLNKQVLALSATYTVEVAEVVEGLMRSPNHVRLGRDSPALLGVNQFV
RLLPYHHQPHRIQQTKLSELQAILATVTFNQCLVFSNSQLRAESICSALRATGWPVSHLT
GGQTQCDRLQALEALCSYKCXVLVSTDLSARGLDSEHVNLVINLDXPRDQATYLHRVGRA
GRFGSRGGAITXASEGDEWQAIRAIATLANVQIYLLQEDWESSIASKDVKSMEKLELLPD
DEVKLWLDNNAQHSYLYGGKKKGKPKKVLEQINAPNGIAESQNKNKVKMTGEFIKDSCKE
NREVDAVSRNHSQKSKNVRESKEASKKYSHNMKTEKKK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagaaaagctcataagcttgaggataaagaaagaacagatgatattcatata
gaagaaaatgtggactttgctggtatgtacttagcagaacatgtgcttgcaggattaaaa
tctgcaggctttggtaaangtcccatccagttagctgccatccctcttggtcgatgtggg
ctggacttgattgtgcaagctaagagtgggactggtaaaacatgtgtttttactgtaatt
gctttggaaatgataagtgtatctgctccatcaacacaagttctcgttattgcgccaact
cgtgaaatagctgtacagataactcaagtaatcaatgctattggtagtacaatgccacaa
ctcagagctgctaccttcattggagggattcttctaaatcaagataaagctaagcttcgt
tgctgccatatagctgtaggaacacctggccgtcttactcaacttgttgaacttgggctt
cttaaactagaaaatgtcagattacttgtgttagatgaagctgacctgttgctgacaggt
cagtttaccaaggcagtagtccatttggcctctgggcttccgttgaataaacaagtatta
gcacttagtgcaacatatactgtagaagtagcggaagttgtagagggacttatgcgatca
ccaaaccatgttcgacttggaagagattcgcctgctctactgggtgtcaaccaatttgta
aggttactcccataccatcatcagccacatcgtatacagcagacaaagttatcagagctt
caggccattctcgcgacagtaacatttaatcagtgtcttgtattttcaaactctcagcta
cgtgcagaatccatttgcagcgcattacgagcaacaggatggccagtttcccacttgact
ggtggtcaaacacagtgtgaccgcttacaggcactggaagcattgtgctcttacaagtgc
nnggttcttgtttcaacagacctctctgcccgtggtctggattcagaacatgtgaatctt
gtcatcaatctggatnagccacgtgatcaggctacatatcttcaccgtgttggacgggcc
ggacggtttggctctcggggaggcgccattacanccgcttcagagggagatgaatggcaa
gccattagggctatagcaacattggcaaatgtacaaatttatcttttgcaagaggactgg
gagtccagtattgctagtaaagatgttaagagtatggagaaattggagttattacctgat
gatgaggttaagctatggcttgacaacaatgcccaacatagttatttgtatgggggtaaa
aagaaaggtaaacctaagaaagtactggaacagataaatgcaccgaatggaatagcagag
tcccaaaacaagaacaaagtaaaaatgacaggagaattcataaaggactcttgtaaagaa
aatagagaggttgatgcagtctccagaaaccattcccagaagtcaaagaatgttagagag
tcaaaagaagcaagtaaaaaatatagccataacatgaaaactgagaaaaaaaaatga
DBGET
integrated database retrieval system
