Homarus americanus (American lobster): 121865031 Help Entry 121865031         CDS       T07477                                  Name (RefSeq) 3'-5' RNA helicase YTHDC2-like   KO K20099   ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6] Organism hame  Homarus americanus (American lobster) Brite KEGG Orthology (KO) [BR:hame00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hame03041]     121865031 Enzymes [BR:hame01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      121865031 Spliceosome [BR:hame03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA helicase-like proteins     121865031 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  YTH HA2_C Helicase_C R3H OB_NTP_bind DEAD HA2_N Ank_2 AAA_22 AAA_19 Ank_5 Ank ATPase nSTAND3 T2SSE Ank_3 FtsK_SpoIIIE AAA_7 SRP54 SpoOE-like Motif Other DBs NCBI-GeneID:  121865031 NCBI-ProteinID:  XP_042220281 LinkDB All DBs Position Unknown AA seq 1612 aa AA seqDB search MGRRRGPNRLVNEAQVSEELKITIALALKKLTQNDDQKELELPSSLTSEERKYIHFLSQQ MGFKSKSRGKGSSRYLTVYKKEGSTIMSSEAVVSLADPTRSTILGLLQRCPVTNKERQDL LPATERDRLMNPELRDLSVLRSLGRLTPGPPQIPPPPSLSDLTAEARKLPIWNMRDQLLA AVHHNQVILVCGETGSGKTTQVPQMLLQEASSLGKPCRIFCTQPRRISALTIAERVAAER GEKVGYTVGYQIRLESKLSPKTLLTFCTNGVLLRTLMGGDSSLASVTHILVDEVHERDRF TDFLLLVLRDCLPKFRHLKLLLMSAALDVNLYAKYFNNCPVIDVPGRCYSVKEYYLEDVL KYTNYQTPEMVKASKELDQRQSGQKTAAAWTQQMSQQILCDMSGAAAVTSPNRSFIASQA KNYELDNTLKEEMDQCIQEAFLNGSDEAFSQMMYLIMSENVSPDYQHSETWATPLMVASG RGRVDIVEQLLALGASLTLRAANDWTAASWANSTGQQEALDLLHAYSACEGVDLLSLTGK GSPAPNKGGLRGSTPAAPPAELSLEDKRMLDSYHHSVSDEVVDIDLVHSLCYKLHTAQPP GAILIFLPGYDDIVTLRDRIIAEEKQYLVGGKYCLFCLHSSMQSSDQKRVFRSAPPGVRK IILSTNIAETSVTINDVVYVVDAGKVKEMSYDSMVGVSCLRAVWISQASSQQRRGRAGRC QPGICYHLFSRSRYSSLQPHQTPEILRTPLQELCLHTKLLAPANMPIADFLARAPEAPAF MVIRNAVQLLKSMDALDGWEDVTELGHHLLDLPLPPRLAKMVITATVLKCLDPVLTVAAC LAYKDPFTLPKHPSEKRNASAVRRKFTSGTFSDHMVLLKAFQAWQKACGEGWERGWCDRN YVSGATMEMIHGMRSQVLAQLRGAGFVRARGPGDIRDVNSNSDNWAMVKAALVSGMYPNL IRVDRDQCQLRTQKESKVRLHPTSSLLDAANNNQGSLSVAHRALVSSLPSDWLVYDEMVR IGVVAHVRTVTLVSPLTVLLLAGPMRLPLDALSEPSSRSSGDCSSDSESEDRPVGLSCLV RIDNWIQFLGDPQAAHLALQLRHKLHALILRRLRAPNKPLTQADEDVVRVVASALSQEEQ ALSLVQPSGVGQRPRPLYPHSHPHEGGWSGGTSEDSQSSRSSSRRTSDAATPPVGIPHPS TKFSGNSSTASKSGSTGTMSMSSPSCVSSNTASGFSNTGPCAMFPSSSSTTGGGFSNTSH GSSNIFTSNTGNKSSSNTTTTTTTTYRSFQSINSGGMNNQSANTNTFLNNSLSQGTSGTN RTSMATPSSVTTPVKTTLSASGGASKPGNKDSKGTYNSKMMSSNSGGAEGGGNSCIGKPR YFIIKASMYKQLEASHHTSIWAFTHNTEKKIMQAFQTGPVILVFTLHRGGQFNGYARFTG EKTDEKCPDITNVGPTLGPLYKIDWVKKWNIGFHQTRRLYNPYNENMQVHLSRDGQEVEI GVGEQLIRLWEKNGGGGNSSGGGGGNYKGSNTYLVGSGGPPMMHEPQGPPPPRHPLHPSH MGAVHSPFHHPFGRNYGNGYGYGGGNGGGGGGGGGGGGGGGYRGGYRGGYRR NT seq 4839 nt NT seq  +upstreamnt  +downstreamnt atgggccgtcggcgcgggccaaaccgtctggtgaatgaggcccaggttagtgaggagctg aagattaccatagccctggcactgaagaaactcactcaaaatgatgaccagaaagagttg gagttaccatcatccctcacatcagaggagaggaaatacatccattttttgtcgcagcag atgggcttcaagagcaaaagtcgagggaaaggctcctcccgctacctgacagtgtacaag aaagagggatcaaccattatgagcagtgaggctgtggttagtctggctgatcctactcgc tccaccatcttaggcctcctgcaacgctgcccggtcaccaacaaggagcgacaggacctt ctgccagccactgagagagaccgacttatgaatcctgagttaagagacctcagtgtatta cgatccttgggccgtctgacgcccgggccgccacagattccgccgccgccaagtctcagc gatctgacggcagaggcgaggaagttacctatatggaacatgagggaccaactccttgcc gccgttcaccacaaccaggtcatcttggtgtgtggagagactggatctggcaagacaact caggtaccacaaatgctactccaagaagcctcgtcattggggaagccttgtcgtatattt tgtacacagcctcgaagaatttcagcactaactattgcagagagagtggcagcagagaga ggagagaaagtggggtatacagttggctatcagatcagactggaaagcaagttatcaccg aagactctgctgaccttctgtaccaacggagttctactacgtaccctgatggggggcgac tcttcccttgccagtgtgacgcacatcctcgtcgatgaggtccacgaacgagaccgattc acagacttcctcctgttagtgctacgagactgcctccccaagttccggcaccttaaactt cttctcatgtccgctgcgctggatgttaatctctatgccaagtacttcaacaactgtcca gtgatcgatgttcctggaaggtgttactcagtgaaggagtattacttagaagatgtcttg aaatacaccaactaccaaactccagagatggtgaaggcttccaaggaactggatcaacgg cagagtggacagaagaccgctgcagcgtggacgcagcaaatgtcgcagcagattctctgt gatatgtctggggcagctgctgtcacctcacccaacaggtcatttattgccagtcaagca aaaaattacgagttggacaacacattgaaagaagaaatggaccagtgcatccaggaagct ttcctcaatggttcagatgaagctttctcccagatgatgtacctgatcatgtcagagaat gtctctccagactatcagcactcagagacttgggcgacccctctcatggttgcttctggc cgaggtcgcgtggacatagtggagcagcttctagcccttggagcatctctcaccttgcga gctgctaatgattggaccgctgccagttgggccaattctactggccaacaagaagcttta gatttactacatgcatacagtgcttgtgaaggtgtggatctgttgtccctgactggtaaa ggtagtcctgctccaaacaagggaggtctacgaggctccacgccagctgcaccgcctgct gagcttagcctggaggacaagaggatgttggactcttaccaccactcggtgtctgatgag gttgttgacattgacctggtccactcactctgctacaagcttcacactgctcagccccca ggtgctattctcatcttcctgccggggtacgacgacatagtcaccctgagggaccgcatc atcgctgaggagaaacagtatctcgtagggggcaaatactgtctcttttgtttacattct agtatgcagtcaagcgaccagaagagagtgttccggtctgcaccaccaggggtccggaag atcatactgtccaccaacatcgccgagaccagcgtgaccatcaatgacgtcgtttatgtc gtggacgctggtaaagtcaaggaaatgagttatgactcgatggtgggtgtgtcttgccta cgtgcagtgtggatatctcaggcatctagtcaacagcgtcgagggcgggcaggaaggtgt cagcccggcatctgctaccacctgttctcccgcagcagatacagctccctgcagcctcat cagacacctgaaattctaagaactcctttacaggagttgtgtctacatactaaacttcta gcaccagccaacatgcccatagcagacttcctggcacgggcgcccgaggctcctgcgttt atggtcatccgtaatgcagttcagttactcaagagtatggatgctctggatggttgggag gacgtgactgagctgggtcaccacctactggacctgccattaccgcctcgcctggctaag atggtcatcacagctacggtgctcaagtgtctcgatcccgtcctgacagttgctgcttgt ttagcttacaaagatccttttacactaccaaagcatcccagtgagaagagaaatgccagt gcagtgcggagaaaatttacctcagggacgttcagcgaccacatggttcttctgaaggcg ttccaggcatggcagaaggcttgtggtgaaggctgggagcgtggatggtgtgatcgtaac tatgtgtctggggcgaccatggagatgatccacgggatgcggtcccaggtgctggctcag ctgcggggagctggatttgttcgtgcccggggacctggtgatatcagagatgtgaatagc aacagtgacaactgggccatggtcaaagctgctctggtatcaggaatgtaccccaaccta ataagggttgatcgtgaccagtgccagttgagaacacaaaaggaaagtaaggtgaggttg catcctacgtcgtctctcttagatgctgctaataataaccaaggctcactcagtgttgct catcgtgccttggtcagctctctgccctctgattggttggtgtatgacgagatggtgcgt atcggagttgttgcacatgtccgaactgtgacgttagtgtcccccctcacagtcctgctt cttgctggcccgatgcgactacctctggacgccctgtcggaaccctcgagccgaagtagt ggtgactgtagcagtgacagtgagagtgaggaccggccagtaggtctgagctgtctggtg aggattgacaactggatacaattcttgggtgaccctcaagctgcccatctggccctacag ctgaggcacaaactacacgccctcatcttgcgacgactcagagcgcccaacaagcctctc actcaggctgatgaggacgtggtgcgagtagtagcctcggccctgagccaggaggaacaa gcactgagtctcgtccagccatctggtgttggccagcgccctcgacccctctaccctcac agtcacccgcacgagggtggttggtccggaggaacttcagaagactcccagtccagtaga tcttcctcacgtcgaaccagtgatgcagccacgcctcctgtaggaatacctcatccctca acaaagttttcaggtaactcaagcacggcatccaagtccgggtcaacggggaccatgtca atgagcagcccttcctgtgtctccagcaacacagccagcggcttctccaacactggccct tgtgccatgttcccctccagctccagtaccactggtgggggattctccaacacaagtcac ggttcttcaaacatctttacctctaacacgggaaataagtcgagctcaaacaccaccacg accaccactactacttataggtcatttcagagcataaattctggtggtatgaacaaccag agtgcaaatacaaatacttttctcaacaacagcctatctcaaggtacatcaggcaccaac agaacctccatggcaacaccgtcctcagtcactacgccagttaaaactaccctctctgcc agtggtggagcaagtaaaccaggaaacaaggactcaaaaggaacttacaatagcaagatg atgagcagcaacagtgggggtgctgagggaggagggaacagctgcatcggcaagcccagg tatttcatcatcaaggcgtccatgtacaagcagttggaggcatcgcaccacacgtccatc tgggccttcactcacaacacagaaaagaaaatcatgcaagcttttcagaccggtcctgtt attttagtgtttacattacacagaggaggacagtttaatggttatgctcgctttactgga gaaaagaccgatgaaaagtgtccagacataaccaatgttgggcccactcttggacccctg tacaaaattgactgggtgaagaaatggaacataggcttccaccaaacccgaagactctac aacccttacaacgagaacatgcaagttcacctgagtagagatggccaggaggtggaaata ggtgttggggaacagctgattcgactctgggagaagaatggcggaggtggtaacagtagt ggaggaggcgggggtaactacaaaggatcaaatacgtacctggtgggtagcggtggtccc cctatgatgcacgagccgcagggaccaccaccgcccagacacccgctacacccctcacat atgggagccgtccactcgccgttccatcaccccttcggaagaaactatggtaacgggtac gggtatggtggtggcaacggcggtggtggtggtggcggcggcggtggaggtgggggcgga ggatatcgaggaggctacagaggcggatacagacgctag

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