Homarus americanus (American lobster): 121865247 Help Entry 121865247         CDS       T07477                                  Name (RefSeq) helicase SKI2W-like isoform X1   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism hame  Homarus americanus (American lobster) Pathway hame03018   RNA degradation Brite KEGG Orthology (KO) [BR:hame00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     121865247  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hame03019]     121865247 Enzymes [BR:hame01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      121865247 Messenger RNA biogenesis [BR:hame03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      121865247   mRNA degradation factors    3'-5' decay     Ski complex      121865247 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel DEXQc_Suv3 Helicase_C ResIII MTR4-like_stalk nSTAND3 Motif Other DBs NCBI-GeneID:  121865247 NCBI-ProteinID:  XP_042220538 LinkDB All DBs Position Unknown AA seq 1212 aa AA seqDB search MDCLERLLGKLPPVLPSLKDQIEEYLLTPEELPIHDPIFSRRWFPRKPDPTRLYDISLLP PSTCLEVERDPATGEITGLREVPNKDAGATAKNSLSMRRAPGPPEETVRGSSTNFPFWPG GFPEPVLDKESVEAEFQLDSNNYLSHHPKLSRGMIFEVPKQLPEKEEKPTEKAPELVVSI TDMLQVDESVLKIFDEKEEKVVKKELILTFENLNEEDTSLVKNFNIEPPPKKDEFVLNIS DASRSSTIVVKNTEWAENIDVNEPVDDFNSQVPNPACKYPFELDTFQKQAILHLEKHDCV FVAAHTSAGKTVVAEYAIALTLKHMTRAAYTSPIKALSNQKYRDFKVKFDDVGLLTGDIQ INPKASCLIMTTEILQSMLYNGSDLIRDLEWVIFDEVHYINNAERGHVWEEVLIMLPSTV NIVLLSATVPNTIEFADWIGRIKKRKIYVISTSKRPVPLEHFLYTGTGGKSKDERFLLVD ANGRFINKGYNDAVAAKNEKKKGHTLQGPKQGRQHMGEKQEKNMWIGLIDHLSKRDLLPI VAFTLSKKRCDSNATQLMSQDLTTKREKGEIFSFIKKCTDRLQGTDKELPQVIYMRSLLQ KGIGIHHSGILPILKEVVEMLFAKGLVKLLFATETFAMGVNMPARCVIFDSIRKHDGKAF RDLVPSEYIQMAGRAGRRGLDSTGTVIILCKNEVPELSELHHMMLGKPTKLESQFKLTYS MILNILRVESISVEDMMKRSFSEVLKMANESKYEAELKQAEERLGKEPEFECMMCKDIEK YYACAKEYERQRRYVYENVLGFPGVMKTMTPGRIVIICFNQYQFRLACLLKIDVKDRNKL TVLILKDGKESSSLTKEQLRLKEAVAASQVDFDILENTSEHASLEMTPQHLAAITNKVIK VNGEKVIDNIKKRQIPRFRDDPPSPSVMGVINELQRLNESGGENLSYLDLVNDCGVRDLA AVTEIDILKNLKLRVMEQSCLECTQFREHFGITFVKLSLQEEIGRLKFLMSEEALQLHPE YQMRIQVLKKLGYIENNNTVTLKGRVACEMGNHELMVTELVLENVFADSPVEIIAALLSS MVFQQKHCSDPNLTPELQKGIKQFQSVASHIGEVQKACGLPEAVGDFVEQFNFGLTEVVY EWAHGMPFNKIMELTDVQEGITVKCIQRLDETFKDVKNAAHLIGDPNLREKMEAASTAIK RDIVFTPSLYTQ NT seq 3639 nt NT seq  +upstreamnt  +downstreamnt atggattgcctggagaggctcctgggcaagctgcctccagtcctgccgagccttaaagat cagatcgaagaatatctcctgactcctgaggaactacccatccacgaccccattttttcc cgtcggtggtttcccaggaaaccggatcccactcgcctgtatgatatttctctgttaccc ccaagtacatgtcttgaggtagagcgcgaccctgctactggtgagatcacgggactgcgt gaagtgccaaacaaagatgctggagccacggctaaaaactcgctgtccatgaggcgcgcc cctggacctccggaggagactgtcaggggatcctctactaacttcccattctggccagga ggattcccagaaccagttctggataaagaatcagttgaggcagagtttcagttagatagt aataattatctctcacaccacccaaaactctcccgaggaatgatctttgaggtaccaaaa cagctgcccgagaaagaggagaagccgacagagaaggcacctgagctagttgtgagtata acggacatgctgcaggtggatgagagtgtactcaagatctttgatgagaaggaggaaaag gtagtaaagaaagaacttatattaacttttgaaaacttgaatgaagaagatacttcactt gttaaaaatttcaacatagaacctcctccgaaaaaagatgaatttgtattgaatatcagt gacgcctcgaggtcttcaactatagtggtgaagaatacagagtgggccgaaaatattgac gttaatgaaccagttgacgactttaactcgcaagttcctaatcctgcttgtaagtatcca tttgaactggacacttttcagaagcaagcaatcctacatttggaaaaacacgactgtgta tttgttgctgcacacacttcagccggcaagacggtggtggcagaatatgccattgcgtta actttaaagcacatgacaagagcagcttatacctctcccattaaagctctttcaaatcag aagtatcgagacttcaaagtaaagtttgatgatgtgggcctcttgactggcgacattcag atcaacccaaaagcttcctgtttaatcatgacaactgaaattttgcaatctatgctttac aatggtagcgatcttataagagatttagaatgggtaatcttcgacgaggttcactatatc aataatgctgaaagaggacatgtttgggaggaggtgctcatcatgctccccagtactgtg aatattgtgttgttgtctgccactgtgcccaacacaattgaatttgcagattggattggc aggattaagaagagaaaaatatacgtcattagtaccagcaagcgtcccgtacctttagaa cacttcttgtacaccggcacgggaggtaagagcaaagacgaacgctttttgctggtagac gctaatggtaggtttatcaacaagggttacaatgatgccgtggctgcaaagaacgaaaag aagaaaggccacacgctgcagggaccaaagcagggccggcaacacatgggagagaagcaa gagaaaaatatgtggattggtctcattgatcacttaagtaagagagacttgctgccgatc gtagcattcactctgtctaaaaagcggtgtgatagtaatgctactcagctgatgagccaa gacttgacgacaaaaagggaaaagggagagatcttttcatttattaaaaagtgcacagac agacttcaggggacagataaagagctgcctcaggtgatttacatgagaagtttactacaa aaaggtattggcattcaccatagtggtattcttcccatccttaaggaggttgtagaaatg ctgtttgccaaaggccttgtaaagcttctgtttgcgacagaaacctttgcaatgggtgta aacatgcctgcaagatgtgtgatatttgattccatcagaaaacacgatggaaaagcattt cgggacttggtacccagcgagtacatccagatggcagggcgtgctggtcgcagaggcttg gactcgactggaacagtcatcattctttgtaagaacgaagtaccagagttgtctgaactt caccatatgatgttagggaagcctacaaaattggagtcacagttcaagttgacatattct atgatcctgaacattttgcgtgttgagagcatcagcgtggaggacatgatgaagaggtct ttctctgaggttctgaagatggctaatgagagtaagtatgaagcagaactaaaacaagca gaagagagactcggtaaagagccagaatttgaatgtatgatgtgtaaagacatagaaaaa tattatgcttgtgctaaggagtatgaaaggcagcgcaggtatgtctatgaaaacgtgctt gggtttcccggtgtcatgaagacgatgactccagggaggattgtcatcatatgctttaac cagtatcaatttcgcctggcatgtttgctgaaaattgatgtgaaagatagaaataagctg actgtgcttatcctaaaagatggaaaagaatccagttccttgacaaaagaacaacttagg ttaaaggaagccgttgcagctagtcaggtagattttgatatattggaaaacacgtcagaa cacgcatcattggaaatgactcctcagcatttagcagctatcacaaacaaagtgatcaaa gtgaatggagagaaagtaattgacaacatcaaaaaacgacaaatcccacgatttagagat gatccaccttcaccgtctgttatgggcgtgattaatgaattgcagcgtctgaatgagtct ggtggagagaatctgtcctatctcgacttggtaaatgactgtggagttagggacttggca gctgtcactgaaattgatatccttaaaaatctaaaactaagagttatggaacagtcttgt ctagagtgcacacagttcagagagcactttggtattaccttcgtaaagttgagccttcaa gaggaaattggtcgtctcaagttcctcatgtcagaagaggcactacagctccaccctgag taccagatgagaatccaagtgctcaaaaagcttggatacattgaaaataacaatacagta acacttaaaggtcgagtggcctgtgagatgggtaaccatgaactgatggtgactgaactt gtccttgaaaatgtgtttgctgacagtccagttgaaataattgctgcactgttgtccagt atggtcttccaacaaaagcattgtagtgatccaaatctgacaccagaactacaaaaggga ataaaacagttccagagtgtggccagtcatattggagaggtacagaaggcgtgtggcctg ccagaggctgttggtgattttgtagagcagttcaattttggcctgacagaagtagtgtac gagtgggctcatgggatgccatttaataagataatggagttgacagacgtgcaggaagga atcaccgtgaagtgcatccagcggttagacgagacatttaaggatgtcaagaatgccgcc cacctcattggtgatccgaaccttcgggaaaagatggaggctgcctccacagctatcaag agggacattgtatttacgcccagcttgtacactcagtaa

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