Homarus americanus (American lobster): 121866513
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Entry
121866513 CDS
T07477
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121866513
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
121866513
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
121866513
NCBI-ProteinID:
XP_042222204
LinkDB
All DBs
Position
Unknown
AA seq
2185 aa
AA seq
DB search
MMSTHSQTNGASLEDCHTNFFALTDLCGIKWRVYVWDNPGGSGVGGGGGVGGGGVGVPAD
PLEDPVLVSYARMIAADVLCVWRRSWRGPQDSVHPSSQMPGHHHHHHHHAQHQQRHSLRH
SPKELWVFWYGDDPDLSNLLAPGLVKSDEKGGSWDWETGLSYECRTLLFKALHNLIERCL
LTRDFVRLGRWFVQPYEGPEGIPGSSSTHLSFSLSFFVHGESIVCASVDVRQHPPVRELT
RRHLLLAQQTNHGIPVILGPYGLNGTLTGVSYRHSEPPIQKLLEEWRQFFPVETKAPPTD
SLEPSLPAAVEVIVGGHKMRYPTCYVLVTDMDDYLMAGRGGSIINIGQMAPGGLKGGLTS
EGTSESSEGSNLSTHNSPFTASTHTLLASEYLSSGGRGLGWSRGMCERVWQDIVQCPGQQ
PPVQHEGLSPEGTLTPAEIAGQWDFSDPATKISCSCAKCRRGRVNSKGCSSSKGRGEKSG
GGSGRHRGGSSMTGSAPFHKRPPPTPLPSHDEAVLDQCGVAAIEESELIQAAARLSGAGT
PGGGNGSGGFGGYKSGGVTTPGSVPSLRLTGVADGHPPSVDSPASITPSPLPTPHSQPSS
VPHHDPTMPTLSPHPPPSNTSVGDPSTPAPLDSLDVKPNISDLMGPKSESSPNNQGMSPY
AGGDRGNGIESNETSSSLGGVGSSNGSIRGLKRPSLPGTDYHSLLELEKPSTVLYDYTKL
NAWLHHPVKKFKPTEPKVEEPLWPPYRPAHIQEHMEPFRPEIGQEIPEMNGLPANRPCGI
KRQADPYDFDDDLGSGTTQEAYKRKDGLDKEEAKTPGSVRSSHDPHSPSQPKKTGNLYTI
EGLQPSLSDLDEIFDSDSAADDPTYPDHTPPGSNKPSGGPDDTAAVINNKSSGGGNNKAS
VNASLVELTKMFPTPPSHEHNPDHDTALDDAASQVITTKQERIEEPRLLHTHELSGISIK
EEPTQTLAVYRPPSVSMFVGSTKYAPLTNLPSQEHKTIITIPEDWVYKPSWQFPVSDKPH
GSAPPMVHMGPLHGGPPTGGHGQKVGISPISPMPSSIGGPVSDSGPGSQRGPNSVGGPAS
AGPPINYELPSPASNQSSYLNKTLPSVEPPTLGLNQVPEANSLIVNIALQDSSVNLFRDH
NFDSCTMCVCNNIQKNVGNIRGNDGTLYLPPTHLSVEEESIKCNCGFSAIVNRRLAFQAG
LFYEDEVDLTGLHEALATERKKQSLLLLMDSKGADNPDRETSILDQIPQSMFRLLQSQCL
VTLSTPSSVIYRSTTVYQNTRRDILLNLVDYKDGNEIACMAVEQSRGANLGDSESGPPAI
RLQCMHKWCYYQFDGPRCSKDIVRCMKALQPHLQEAIQKKGRRVNWEPVFSVDGPLTWRQ
FHRMAVRGTEDMAEPLPIPMLLTGHDRDWLSVAPQSLRHWEKLLLEPYSQQRNVAYVVVA
PDNEFILNHVRTFFKELSSIYELCRLGRHSPIQRVLRNGIMRISKTAASKVANEPLEEWF
SLLGDSHMSTKLKVYAQVCRHWLAPHLATLNMDKSLFEVPGSSKSSERQAPSPMPPPSSE
NMNSTTASTTPTSNSDPEGTYSSSSTVSNSQQGTITLGAGASLNEVDEDDSPPPAILVYL
VDPFNVGQDHPDMHRLVTLGLLRCYEHMLEGLPENMQNNVYLQIVSLESILELASDSHDR
SRHIDQLKSLAFSVFMQCRRTLSHNAVVKSLTGFGPASVYDGFLKPKEASLAVEEKRLAP
YHIFSPAYILAPIKESRGTYKEAQEALGVPQEKSTILNCTYCLSEDQRWLLATATDELGE
ILETVTISIEIPNRTRRKKASARRHGLKKLMDWILTVMSIGIHPWRLVVGRLGRMGHGEL
KGWSSLLSRKSLTQASKNLKEMCKQCAYLFPGDAPCILSACLVSMEPDSSFRMMPDMFTP
DERFGQNSQNCSLSTPQDLTCTHILVFPTSATAQSAQQRFHDEQGFHFEGAELLLHDEVL
EDDMSGGMGDIGIGIGLNINDILNLDTGPNQDDQMEDGSGQRDSFSQPGSPTTGVGGRTS
PSQFSGQARSNGVVLVDPQEDSGGSVLQQPLALGYYVSTASTGRLPRWFWSSCPHLESSC
PVFLKSALHLHSPGITQSDDFLHSTNNKVHPLDSSYTTDVLRYVLEGYNGLSWLVLDPAK
QDRRSCLPLHMQVLSHLYNVMAALV
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgacgcactctcagacaaacggggcaagcttagaagattgccacaccaatttc
ttcgccctgactgacttgtgcgggataaaatggcgagtgtacgtgtgggacaaccctggc
ggaagcggcgttggcggcggcggaggcgtcggaggcggcggcgtcggagtcccagctgac
ccccttgaggacccggtgttggtgtcctacgcccgcatgatcgccgccgacgtgctctgc
gtgtggcggcgctcgtggcggggaccccaggactccgtgcatccctcttcgcagatgcca
gggcaccaccaccaccaccaccaccacgcccagcaccagcagcggcactccctccgtcac
tccccgaaggagctgtgggtgttctggtacggcgatgacccggacctctccaacctgctc
gccccggggctagtcaaaagcgacgagaaaggaggatcgtgggattgggaaacaggtctg
tcctatgagtgccgaacacttctcttcaaggctctccataacctcattgaacgatgtctt
ttaactcgggatttcgtgaggttgggtcgctggtttgtgcaaccatacgaaggcccagaa
ggtatccccgggagcagtagtactcacttatcatttagcctgtcattctttgttcacggt
gagagcattgtttgcgcaagtgtagatgtccggcagcatcccccagtaagagaacttact
cgacgtcatctcttgttagcacagcagacaaaccatggcataccagtgatcttgggacct
tatgggcttaatggtacattgactggtgtaagttaccgccattctgaacctcctatacaa
aagttgttagaggagtggaggcaatttttccctgttgaaactaaagccccacccactgac
tctttggagccttctctccctgcagctgttgaagttattgtaggaggccacaagatgcgc
tacccaacgtgctatgtgttagtgacagacatggatgattatctgatggctggtcgtggt
ggaagtattataaatataggacagatggctccagggggccttaagggtgggctaacaagt
gaaggcacttcagagtctagcgaggggtcaaacctctccacccataattctcccttcaca
gcctcaactcataccttactagcctcagagtatctaagttctggtgggcgaggtttgggg
tggtcacgcggaatgtgtgaacgtgtctggcaagatatagtacaatgcccaggtcagcaa
ccaccggtgcagcatgaaggtctctctcccgaggggacactaacacctgctgaaattgct
ggtcaatgggacttctccgacccggctacaaagatcagttgttcctgtgccaaatgcagg
aggggtcgggtcaatagtaaagggtgtagcagcagtaagggccggggagagaaaagtggt
gggggcagcgggcgtcaccgggggggcagctccatgactggcagtgcccccttccacaag
cggccccctccaactcccctaccctcgcatgatgaagcggtcctggaccagtgtggtgtg
gcagccatcgaggaatccgaactaatccaggctgctgccaggttgagtggggctggaaca
cctggtggcggtaatggaagtggggggtttggaggctacaaaagtggaggcgtaaccact
ccagggagtgtacctagcttacgattaacaggagttgctgatgggcaccccccttcagta
gactcccctgcatctataacaccatcacctcttcctacacctcattcacaaccttcatct
gtgcctcatcatgaccccaccatgccaacattaagtcctcacccaccaccatctaataca
tcagttggtgacccttctactcctgcaccccttgattcactagatgtgaaacccaacatc
tcagacctcatgggtccaaaatctgaatcttcgcctaacaaccagggtatgtctccgtat
gctggaggtgacagagggaatggcattgaatcaaacgagaccagcagcagtttgggtgga
gttggaagcagcaatgggtctataagagggttgaaacgaccatctcttcctggcactgac
taccattcccttttggaattggaaaaacccagcaccgtcctgtatgactacaccaaatta
aatgcttggcttcatcatcctgttaagaagtttaaaccaacagaacctaaagttgaagaa
cctctctggccaccatacagaccagctcacatccaggaacacatggaaccttttagacca
gagattgggcaagagattccagaaatgaatgggttacctgctaatcgtccatgtggtatc
aagagacaagctgacccatatgactttgatgatgaccttggatctggcaccactcaggag
gcatataaacgaaaagatgggctcgataaagaggaagctaaaactcctggcagtgttcgg
tcatcacatgaccctcattctccttctcaaccaaagaaaactggaaatttgtacacaatt
gaaggacttcagccatctttatcagatctggatgaaatctttgattcagattctgctgca
gatgatcccacatacccagaccatactccacctgggtctaataaaccctctggaggacct
gacgacactgctgccgtcatcaacaataaaagtagtggaggcggcaataacaaagccagt
gtgaatgcaagtcttgtggagctgaccaagatgtttccaacacccccgtcccatgagcac
aaccctgaccatgatactgccttggatgatgcagcatcgcaggtcatcacaaccaagcaa
gagcgtattgaggaacctaggctcctgcacacacacgaactttctggtatctctattaaa
gaggaaccaacgcagacccttgctgtctaccgacctccttctgtgtcaatgtttgttggg
tcaacaaaatatgctccactaacaaaccttccaagtcaggaacataaaacaattatcact
attccagaagattgggtgtacaagccttcttggcaatttccagtctcagacaagcctcat
ggatcagctcctcctatggtccacatggggcccctccatgggggcccacctactggtggc
catggtcaaaaggtgggaatatctcccatatcacccatgccatccagtattgggggccct
gtgtcagacagtggtcctgggtctcaacgcggacctaacagtgttggtggtcctgcatca
gcggggccgccaattaattatgaactaccatcaccggcgtccaatcagtcatcttacctc
aacaagacactgccgtcggtagagcctcctacactggggcttaaccaagtacctgaagct
aattccctcattgttaatattgcactgcaagattctagtgtcaacctgtttagagatcac
aactttgactcttgcacaatgtgtgtgtgtaataacatccagaaaaatgtaggcaatatt
cgtggcaatgatggaacactctatttgccacccacacatctgagtgtggaggaagaaagt
attaagtgtaattgtggtttctctgcaatagttaatagaaggttagcctttcaggctggg
ttgttttatgaggatgaagtggaccttactggcctccatgaggctctagcaactgaacgc
aagaaacagtccttgctcttgcttatggacagtaaaggtgcagacaatcctgaccgtgaa
accagtattctagatcagatacctcaatctatgtttcgtctcttgcaaagccagtgctta
gtaacgttaagtactccatctagtgttatatatagatcaacaacagtgtaccaaaatact
agacgagacatcttgctaaacttagtagattataaggatggaaatgaaattgcatgtatg
gcagttgaacagtctaggggagcaaaccttggtgatagtgaaagtggccccccagcaatc
agacttcagtgcatgcacaaatggtgctattaccagtttgatggtcccagatgttctaag
gatattgtgcggtgcatgaaggccctccagcctcatttacaagaagctatacaaaagaaa
ggaagaagagtcaattgggaaccagtgttcagtgttgatggtcctctcacttggcgacag
tttcatcgtatggctgtgagaggcaccgaggatatggctgaaccattgcctattcccatg
ctgttgactggtcatgatagagactggttgtcagtagcaccacaatcactccgacactgg
gaaaagttactcctagaaccatattctcaacagcggaatgttgcctatgttgtggttgcc
ccagacaacgagtttattctcaatcatgtacgcaccttcttcaaagaactgtcttcaata
tatgagttgtgcagattgggtcggcactcacccatccagcgagtgttaagaaatggaatc
atgcgaataagtaaaactgcagcgtctaaagtagcaaatgaacctttagaagaatggttc
tcattattgggtgattctcacatgtccaccaaactcaaagtttatgcccaggtgtgtcgg
cactggttagcaccacacctagcaacactgaacatggataagagtctctttgaggtgcct
gggtccagtaaatccagtgaaaggcaagctccttcaccaatgcctccaccgtcatcagaa
aatatgaatagtaccactgcctcaactacaccaacatcaaattctgatcctgaaggaacc
tattcttcatcttcaacagtctccaactcgcagcagggaaccatcactcttggagctggt
gctagtctgaacgaagttgatgaggatgattcccctccacctgctatcctggtttaccta
gtggaccccttcaatgtaggacaagaccacccagatatgcaccgtctggtcactctagga
ttgctccgctgttatgaacatatgttggaaggacttccagagaatatgcagaataatgtt
tatctccagatcgtttcgttggaaagcatcctcgagttagccagtgattcacatgaccga
tctcgtcacatagaccaacttaagtcattggcattttcagtgttcatgcaatgcagaaga
actctcagccataatgcagtagttaaatcactcacgggctttgggcctgcatctgtttat
gatggatttcttaagcccaaggaagcaagtcttgctgtggaagaaaagcgtttggctcca
tatcatatcttctctcctgcatatattttggctcccatcaaggagagtcgtggtacctac
aaagaagctcaagaagctttaggagtaccacaggagaagtccaccatactaaactgcacc
tactgtttgtctgaagatcaaagatggctactggcaacagctacagatgaactgggagaa
atcttagaaactgttaccatcagcatagaaatccctaatagaacaagaagaaagaaagcc
tctgcccgtcgtcatggactgaaaaaattaatggattggattttaactgtcatgtccatt
ggcatacatccctggcgactggttgtaggaagactgggcagaatgggtcatggagaattg
aagggttggtcttccttactttcacggaagtctctaacccaagcatcaaagaatcttaag
gagatgtgtaaacagtgtgcttatctatttcctggagatgcaccgtgtatactctctgca
tgcttagtctccatggagcctgattcttcatttcggatgatgccagatatgtttacccct
gatgagagatttggtcaaaatagtcaaaactgcagtctgtccacaccacaagatctcact
tgtactcatatactggtcttcccaacatctgctacagcacagtcagcacagcagagattc
cacgatgagcaaggtttccactttgaaggtgcagaattgttactgcacgatgaagtttta
gaggatgacatgagtggtggtatgggtgatattggcattggaataggactaaacataaat
gatattctcaatcttgatactggtccaaatcaagatgaccaaatggaagatgggagtggc
cagcgggactccttctctcagcctggtagccccacaactggggtagggggtagaacaagt
ccctcacaattttctggacaggcgcgtagtaatggggttgttttagttgacccccaagaa
gattctggtggttctgttttgcaacaacctctggctcttggatattatgtgtcgacagcc
tccactggacggctgcctaggtggttctggtcgtcctgcccacatcttgaatcatcttgc
ccagtgtttctcaagtcagccctccacctccattctccaggaattacacagtctgatgat
ttcttgcatagcacaaataacaaggtccacccattggattcttcatacaccactgatgtt
ctcagatatgttcttgaaggctacaatgggctctcctggctagtcctagatcctgctaaa
caggacagaagatcatgcctgcccttacacatgcaagttctgtctcatctctacaatgtt
atggcagcccttgtttga
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integrated database retrieval system
