Homarus americanus (American lobster): 121866710
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Entry
121866710 CDS
T07477
Name
(RefSeq) exosome complex exonuclease RRP42-like
KO
K12589
exosome complex component RRP42
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121866710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121866710
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121866710
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
121866710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
121866710
NCBI-ProteinID:
XP_042222352
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MTDINLSDAEKRYIVDGVKLGIRVDGRDRLDYRQLEIETSVVSTANGSARVRLDHTDVLI
TVKMEMEPPLIDQPRNGKLYFFVNCSANAAPEFEGRGGEDLGTSLSSMLERVYSSPHTLD
TSKLCVVPGKYVKGLYVDIEILECGGNLFDAVSLGVKAALWATKMPRIYITGEDGGELEF
SVSDNPCDVDRVDVSNAPILITHLRITENLTVVDPTPEEECCGPVQIVVGVTPKGLITAT
QQLGSGTFTPQTLSASIKSARDLGVKIHQRLMEKLRQEENITDRPIKGFL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgacagacattaaccttagtgatgcagaaaaaagatatattgtagatggagttaagttg
ggaattcgtgtggatggtcgagatcgactggattatcgacaacttgaaatagaaaccagt
gtagtttctacagctaatggttcagcccgagtgaggcttgaccatacagatgtcctaatt
acagtcaaaatggagatggaaccaccattaatagaccagcctagaaatggaaaactttac
ttctttgtaaactgctctgccaatgctgctccagagtttgaaggccgtgggggtgaggat
ttgggcaccagcttaagctcgatgttggaaagggtgtactcttctccacatacactggat
acttcaaagctctgtgttgtgcctgggaagtatgtgaaaggactgtatgttgacattgag
atcttggagtgcggtgggaatttgtttgatgcagtgagtttaggcgtgaaagcagcactt
tgggcaaccaagatgccaagaatttacatcactggagaagatggtggggagttagagttt
tcagtttcagacaatccttgtgatgttgacagagttgatgtctccaatgccccaattctt
ataacccatttaagaattacagagaatttgacagttgttgacccaaccccagaagaagaa
tgctgtggccctgtacagattgtggttggtgttacccctaaagggttaattacagcaact
caacagcttggttcaggaacatttacaccacagacattaagtgcttccattaagagtgca
cgagatcttggagtcaagatccatcaacgactaatggaaaaattgcgacaagaggagaac
atcacagatagaccaataaaagggtttctttag
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