Homarus americanus (American lobster): 121867185
Help
Entry
121867185 CDS
T07477
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hame03016
]
121867185
Enzymes [BR:
hame01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
121867185
Transfer RNA biogenesis [BR:
hame03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121867185
Prokaryotic type
121867185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
SHOCT
Motif
Other DBs
NCBI-GeneID:
121867185
NCBI-ProteinID:
XP_042222916
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MIKIYVYIGSSKYKGCVDVVVEGLQHLALMMAPLTVIQSIGLPKYRDFIKLVRWARSWPP
RYHCSPALGIWHLPAVSLVTSLPNMNNDTLSSLKGMRVQHLPEHEMTEAEVKHIVLNPTP
DVDEPLRMKRKFALLISFSGQGYYGMQKNQYSRTIESDLLAAMLAAGLITEEELNVPQLF
SFQRGSRTDKGVSAARLLVSALFPTDVPDLVGEINKHLCDQIRVMAAYRVIKSFSSKLWC
DSRTYSYMCPTFAFAPCTEVISEDYRITPEVIEELGRLLQMYIGHRNFHNFTSKVNYHEL
RASRRVIDANCSEPYERGGLEWITIKIRGQSFLLHQIRKMIALTMVICRGLAKPDLILRA
FKEDFIDLPIAPALGLVLEDQHFDHYNKKYASYGTREPLNWDAVAENIHQFREQHVESTI
VTTEIKEKSMLKWLVVPHFHDLDMWAVSPQADSQQGKTHSRVTSPIWRAQKKIYEVRDGE
SLDTNSNSSDDEDK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatatatgtttatattggaagtagtaaatataaaggttgtgttgatgttgtg
gttgagggactacagcacctcgccctgatgatggcaccactaacggtgatacagtccatt
ggattaccaaaatatagagacttcataaaattagttagatgggcaagatcatggccacca
agatatcattgttccccagctctaggaatttggcatcttccagcagtttcattagtgacc
tccttgcctaatatgaacaatgacacattgtcaagccttaaaggtatgagagtacagcat
ctacctgaacatgagatgactgaggctgaggtgaagcacatcgtattaaaccctacacct
gatgttgatgagccactgagaatgaagaggaaatttgcgttactcatctccttcagtggc
caaggatactacggcatgcagaagaatcagtatagtcgtactattgaaagtgatttgctt
gcagccatgcttgctgcaggtttgatcacagaagaggagctcaatgtcccacaattgttc
tccttccagcggggttctcgaactgacaaaggcgtgtctgcagcacggctgttagtttct
gctctgtttcctacagatgtgcctgacctagtaggggaaataaataaacatctgtgtgac
cagatccgtgtgatggctgcatatcgagttataaaaagcttcagcagcaagctgtggtgt
gactctcgcacctattcatacatgtgcccaacttttgcttttgctccttgtaccgaggtg
atcagcgaggattatcgtatcactccagaagtcattgaggaactcggaagattgttgcag
atgtatataggccatcgtaatttccataattttacatctaaagtaaactaccatgaactg
cgtgcctcccgccgtgttattgatgcaaactgcagtgaaccatatgagcgtggtggcttg
gaatggatcaccataaaaattagaggtcaaagtttcttgctgcatcagattcgtaaaatg
atcgccttgacaatggtcatctgtcgaggactagctaaaccagacttaatactgagagca
tttaaggaagatttcatagatctgcctatagcaccagcacttggcttggttcttgaagat
caacattttgatcattataacaagaagtatgcttcatatggtacccgtgagcctctcaac
tgggatgcagttgctgaaaatatccatcaattccgtgaacaacacgtagagtcgacaatt
gttaccacagagataaaagagaagtcaatgttaaaatggttggttgtaccacattttcat
gatctggatatgtgggcagtctcaccccaagctgacagccaacaaggaaaaacacattca
cgagtgacatctcctatatggcgtgcacaaaagaaaatatatgaagttagagatggggaa
agccttgatacaaacagcaatagcagtgacgatgaagataaatga
DBGET
integrated database retrieval system
