Homarus americanus (American lobster): 121867215
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Entry
121867215 CDS
T07477
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hame03016
]
121867215
Enzymes [BR:
hame01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
121867215
Transfer RNA biogenesis [BR:
hame03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121867215
Prokaryotic type
121867215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
121867215
NCBI-ProteinID:
XP_042222988
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MAVNIGRHSLSATRLCQLTSRILMASSKENSGDGESLCQGVSMKRASASERTETQVKRIN
LDASSEVEGGETVRRKRRKYALLLSYSGKGYLGMQRNPGYRTIEDDLLTAMLRADLITDE
GCTCPQMFHFQRAARTDKGVSAARQVVSLKLPEDVPDIAGAINGHLCSQIRVMAIRRTTK
SFNCKSWCDSRTYSYLCPTFAFAPVTEMRHEGYRITSEVLEQLKTTLSLYKGTHNFHNFT
ARKKAQDASANRYIMDIDCGQPFEREGLEWITIKIKGQSFMMHQIRKMIGLTMAVTQGLA
NADIITRAWGKDRVDVPIAPGIGLVLEEPHYDKYNKRYGSDGIHEPLNWDEAAQKIQEFR
ELYIDSSIVKTEIKEKPMLKWLATLPLHNFNISEASNGNDDQLESSNGRTPLGRAASRLE
NYRGAGHQDKGSDDEAEDEDEGDLEQYRVVPVMKVAEAAPHGTEQCINGTNTHIVNGVER
DDASIIKTGKIISNGDEEQSPDTKDHYTENIG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaacattggaagacattccttgtctgcaaccagactttgtcagctgacctca
cgtattttaatggcatcatcaaaggaaaatagtggtgatggtgaatcactctgtcaagga
gtgagtatgaagcgagcatcagcgtctgaaagaacagaaacgcaagtgaaacgcattaat
ttagatgcttcatctgaggttgagggaggggagactgttagaagaaaacgaaggaaatat
gctttactcctctcctactctggcaaaggctacttggggatgcagaggaacccaggctac
cgcaccatagaagatgacttattgacagccatgctacgtgctgaccttataactgatgag
gggtgtacctgcccacagatgtttcacttccagcgagcagctcgtacagacaagggtgtt
tctgctgcacggcaggttgtgtcactcaaacttcctgaggatgtaccagacatagccgga
gccatcaatggacatctctgtagccagattcgtgtcatggccattcgccgtaccaccaaa
agttttaactgcaaatcatggtgtgattcacgcacttattcttatctgtgtcccacgttt
gcgtttgctcctgtgacagagatgagacatgagggctaccgcattacttcagaggtcttg
gaacaacttaaaacgactttgagtttatataaaggcacacataatttccacaattttacg
gcccggaagaaagcccaggatgccagtgccaatcggtatattatggacattgattgtgga
cagccatttgaacgtgaaggcttagaatggatcaccatcaagattaaaggacaaagtttc
atgatgcaccaaattcgcaaaatgattggtttgacaatggccgtcactcagggactggcc
aacgccgacatcatcaccagagcgtgggggaaggaccgcgtggatgtgcccattgcaccg
ggaattggcttagtcctggaggagccacattatgacaagtataataagagatatggatcc
gacggcatccatgagccactgaattgggatgaagcagcacagaagattcaggagttccgt
gaattatacatcgattcctcgatagttaaaacagagatcaaggagaagccaatgctgaaa
tggttggcaacactacctcttcacaatttcaacatatctgaggcctcgaatgggaatgat
gatcagctagagagctcaaatggaagaaccccgttagggcgtgcagcatcaagattggaa
aattaccgaggagctggacaccaggacaagggaagtgatgatgaagctgaggatgaagat
gaaggagacctggagcagtatcgagtggtccctgtgatgaaggtggcagaagcagcacca
catggaacagaacaatgcataaatggaactaacactcatattgtgaatggtgtcgagaga
gacgatgcaagcataattaagactgggaagattattagtaatggagatgaggaacagagc
cctgatactaaagatcattatacagaaaatattgggtaa
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