KEGG   Homarus americanus (American lobster): 121867234
Entry
121867234         CDS       T07477                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
hame  Homarus americanus (American lobster)
Pathway
hame04512  ECM-receptor interaction
hame04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hame00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121867234
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121867234
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:hame00535]
    121867234
Proteoglycans [BR:hame00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   121867234
SSDB
Motif
Pfam: Collagen Laminin_G_2
Other DBs
NCBI-GeneID: 121867234
NCBI-ProteinID: XP_042223020
LinkDB
Position
Unknown
AA seq 908 aa
WCCRDIFPLGLQEFSLICTYRARRPPRGPWDIIRINDLEDRPQFAVTLNPITENVEFSIL
AYDGTLQTLEFDQAKSAFDTNWHKLHFGVFRDSVTLYLDCENTTQVPLDPFGPIDVNGNI
HIAKLQDSSRTVPRKRQRKNIELQWMVMSCDPASPERETCLELPERELITQERPEQCEVI
CPIGPRGFNGTDGRRGRRGERGLPGDIGEPGLRGFPGAKGESGVQGPPGSVGLPGAQGRQ
GGTGSRGFPGPAGPQGPIGLQGLSGPLGPKGNSGDRGLPGIPGPVGPPGEAGPRGVPGDA
VLVTGPAGEQGPPGIPGLGGPPGLDGLPGGIGPKGESGRRGDRGLNGRRGIPGLKGERGQ
GGPVGPRGEPGVAGPPGAPGGSGGDVNGVAVPGLPGAPGTMGPIGQPGEMGMKGEIGVPG
REGLPGPRGDKGDRGPTGLAGADGSKGEPGRTGSPGSDGAKGELGLPGITGLIGKPGVVG
LPGPQGPMGPPGPEGLKGTAGDRGQPGLAGEPSPPGQPGPQGPQGMQGERGEEGPPGSGG
PPGLRGPPGNHGQIGIIGPKGHAGLPGLKGEPGKPGRRGEVGPMGGVGSRGPAGPQGPPG
RPAKDGTKGTRGIQGPVGPRGLPGPSGPSGPLGPTGSPGLPGFMGKPGPPGPPGPPGPPG
DSAAQPLQVAGERVYGLPGVMGPMGPSGLPGERGADGSRGPEGKRGHPGQSGPAGPSGLP
GSPGQRGPPGNSGIPGTPGREYTEAELRGICASVLRENLAEIAKTLRGPPGIPGIGQRGP
PGEPGEVGAPGAPGPNGETGQRGYTGYPGAAGPPGPAGERGPPGYKGDRGVMGEGRDGKI
GQPGEPGPPGPPGVGLPGRIGERGSPGLNGPQGGRGAPGPQGPPGHCEYCNPALAYQAAA
SQGNTKGP
NT seq 2727 nt   +upstreamnt  +downstreamnt
tggtgttgcagagacatcttcccgctgggtctacaagagttctccctcatctgcacctac
cgggctcgtcggcccccccgcggtccctgggacatcattaggatcaatgaccttgaggac
aggccgcagtttgccgttactcttaaccccatcaccgagaatgttgagttctccattctg
gcgtacgacggaacacttcagacgttagagtttgaccaggcaaagagtgccttcgacaca
aactggcataagcttcacttcggtgtgttccgagatagtgtgacgctctaccttgactgt
gaaaatacgacgcaagtaccacttgacccctttggtcccatagacgtcaatggtaatatc
catattgcaaagctgcaagattcttctcgcaccgttccaaggaaaaggcagaggaagaat
attgagctacagtggatggtgatgagctgcgacccagccagcccagagagagagacctgc
ttagaacttccagagcgagagctgataacgcaggagagacctgagcagtgtgaggtcatt
tgcccgattggtcctcgcggcttcaacggcacagacggtcgtagggggcgacgtggtgaa
cgtggcctgcctggtgacattggcgagcctggtctgcgtggttttcctggcgccaagggt
gagagtggagtgcaaggacccccaggttctgttggtctgccaggagcacaaggtcgacag
ggagggactggcagccggggtttccctggacccgcaggacctcaaggtcccattggtctt
caagggctttcgggtcctcttggtcctaaaggaaacagtggtgacaggggtcttccaggt
atacctggtcctgttggtcctcctggtgaggctggccctagaggtgtgccaggtgacgca
gtcttggtgaccggacctgctggcgagcaaggtcccccaggtattccaggacttggaggc
ccccctggtctagatggacttcctggtggaataggacccaagggagaatcaggaagacga
ggcgaccgagggttgaatgggcgacgaggtattccaggactaaagggagaacgtggccaa
ggaggacccgtaggacctcggggtgagccgggggttgctggaccacctggagcacctggc
ggatctggtggtgatgtcaatggagtagctgtgcctggactgcctggtgcacctggcaca
atgggaccaattggacaaccgggtgagatgggaatgaagggtgaaattggagttcccggt
agagaaggtcttcctggtccacggggtgataaaggtgaccgaggaccaacagggctcgct
ggtgctgacggcagtaaaggagagccaggaaggactggaagtcccggcagtgatggagcc
aaaggagagctagggttaccaggcattactggtcttattggcaaacctggagttgttgga
ctgcctggtccccaaggacctatgggtccgcccggtcctgaggggctgaagggtacagca
ggtgatcggggtcagccaggtttggctggagagccgtcaccacccggccaacctggaccc
caaggtcctcaaggtatgcagggagaacgcggtgaggagggaccaccaggttccggtgga
cctcctggacttcggggaccaccaggcaaccatggacaaataggaatcattggtcctaag
ggacatgctggtttaccaggacttaagggagagcctggcaaacctggtcgtaggggtgaa
gttggccccatgggaggagtcggtagtagaggaccagctggccctcagggtccaccggga
cgcccagcaaaagacggtaccaagggaactcggggcattcagggacctgtcggccctcgt
ggcttgcctggaccttccggtccgtcaggtcctcttggtccaactgggtcacctggcctt
cctggcttcatgggtaaacctggtccacctggacccccaggtcctcctggtccacctggt
gactcagccgctcaaccactgcaagtagctggagaacgcgtatatggtctgcccggtgtg
atgggtcctatgggaccatcaggccttcctggtgagcgtggtgcagatggttcccgaggc
ccggaagggaaaagaggtcatcctggccaatctggacctgctggaccatccggtctacct
gggtctccgggtcagcgcggacctcctggtaatagtggtatacctggtacaccgggtcgc
gaatacacagaggctgagttacgtggaatatgcgcttcagttttaagagaaaacttagct
gagatagccaaaaccttgcgaggcccccctggcatacccggcataggacagcgtggacca
cctggtgaaccaggggaagttggtgctccaggtgctcctggacctaatggtgagacggga
caacgcggctacaccggctacccaggtgctgctggtccacctggcccagcaggtgaacga
ggaccgccgggctacaagggtgatagaggagtcatgggtgagggaagagatggtaaaatt
ggacaacccggtgaaccaggaccacctggacccccaggagtgggtcttcccgggaggata
ggtgagcgtggatcccctggtctcaatgggccccagggtggcagaggtgctccagggcct
cagggtcccccaggccactgtgagtactgtaaccctgccttggcgtaccaggcagctgca
tcccaaggtaatacaaaggggccgtga

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