Homarus americanus (American lobster): 121867458
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Entry
121867458 CDS
T07477
Name
(RefSeq) transcription factor SOX-8-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hame03000
]
121867458
Transcription factors [BR:
hame03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121867458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121867458
NCBI-ProteinID:
XP_042223303
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MASDNATTTTTTPVTKNHDKPKEKGIEDAVSKLLEGYDWTLLPMTQKSSLKHRAHIKRPM
NAFMVWAQAARRRLADQYPQLHNAELSKTLGKVWRVLSDEEKLPFIEEAERLRSQHKKDH
PDYKYQPRRRKPPKSLSSLMEGDTGAPPLSYRVQGGLMGGGGGYCPGVGMSMTLPPSHAH
AAPPTPPKTPQHQHNLRVGGSSGSGGVGEGAGRSDCSFGKSTVSASYVRDHHHTPHSHAH
FSGLDATKAQLFSQAGSNSSMGGSSTSQYMSDSGSPGARMEAAMALQAARNNFSPSSSSA
PSFSPSNSSPGSSTSSTSSAAFFRDDTTANMAANLMRPAFGQELFQGHMFAGSAHAQGAM
NLQGAQSFYHYGAQGLHPYYMTPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacaatgcaaccacgactaccacaaccccagtgactaaaaaccacgacaaa
cccaaggagaaggggattgaagacgccgtatccaagcttctagaaggatacgactggacg
ttgctgcccatgacccagaagtcgtccttgaagcaccgtgcccacatcaagcgacccatg
aatgcgtttatggtatgggcacaggcggcgaggcggaggttggcagatcagtacccacaa
ttacacaatgctgaactctccaagaccctgggcaaggtctggagagtgctgagtgacgag
gagaaattgccctttatcgaggaagctgaacgactacgctcacaacacaagaaagaccat
cccgattataagtatcagccacgtcgacgtaaaccgccgaagagtctctctagcctgatg
gagggagacacgggggcaccgccgctctcctaccgagtccagggagggttaatgggtgga
ggtggagggtactgtcctggcgtgggtatgagcatgactctcccgccctcccacgcccac
gccgcaccgcccacaccgcccaagacaccacaacatcaacacaacttaagggttggcggg
tcatcgggaagtggtggggtaggtgagggtgctggaaggagcgactgtagctttggcaag
agtaccgtctctgcttcctacgtcagggaccatcatcacacccctcactctcacgcccat
ttctccggcctggatgcaaccaaagctcagttattcagtcaggctggcagtaacagcagc
atgggaggcagcagcaccagtcagtacatgagtgactctggcagtccaggagccaggatg
gaggctgccatggctctccaggcagccagaaacaacttctcaccctcatcatcttccgct
ccctccttttctccgtcaaactcctccccgggttcctctacgtcgtccacgtcgtcagca
gccttcttcagggacgacaccacggcgaacatggctgccaacctcatgcgtccagccttt
ggccaagaactatttcagggccacatgttcgccgggtcagctcatgctcagggggccatg
aacctgcagggagctcagtccttctatcactacggtgctcagggccttcacccttattac
atgacaccaagataa
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