Homarus americanus (American lobster): 121867538
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Entry
121867538 CDS
T07477
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121867538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hame02000
]
121867538
Transporters [BR:
hame02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121867538
BRITE hierarchy
SSDB
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Paralog
GFIT
Motif
Pfam:
SNF
HECW1_helix
Motif
Other DBs
NCBI-GeneID:
121867538
NCBI-ProteinID:
XP_042223467
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MDTDLNVAYIRYPPTTANEPPDGPCHVCDEYGSCHTCNSHAHTCFIKPAGGPKGTKEEDR
SARGGGMSQSQQDTTAASQHSEVDNAKGVGGSIYKIEESEVGSKMSLSQDSSTERGNWQT
KWDYFLSVAGFSIGLANVWRFPYLCYMNGGGAFLVPYLLVLVVVGLPLYLLESALGQFSS
CSCFTLYEVCPIFKGVGYATFIMNLVFVAVYSVVIAYPLVFLYNSFSTKLPWSSCGNTWN
TPACSLAENRNSTLAGDSQQLSPADEFFHNFILEISDDITELDGFLWPVVGASFFIWTFV
FLTVFKGINVFGKVVWFTAIFPFIMLFTLLIRGLTLPGAWDGIYFYIWPNFEKLKELKVW
AAAAGQIFYSLGPGWGILTTLGSYNKFHNKCQRDAVLVPILNCATSILAGFVVFSVLGFM
AHRTGTTVEKVTSAGPALVFITYPEALSLMPFAPLWAVLFFLMIFFLGIDSMIAHIETTT
VSFVDEFPQYRHRRGLVTFLVCFFDMLASLLFCTRGGIYWLTLVDWYSASYTLILNCLCE
ILIFGLIYGAGRTVRDLQIMTTEKVSYYWYVVWLAAAPTVLLLIFINTMVSNAPASYRGE
AFPGWAQGIGWLTALVSMLAIPIYFFYYLTCASSGSLSQRMECGLQPAESWGPAVESHRE
EWETLCKQQPLRHRLLHPDLFPTFPNYNLTESSRAFSKPQDRDFSLNNYSSNITQV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggacacggacttgaatgttgcctacatccgctaccctcccacgacagccaacgagccc
ccagacggcccctgtcatgtgtgtgacgagtatggctcctgccacacctgcaacagtcat
gctcacacatgctttatcaagcctgcaggaggcccaaaggggacaaaggaggaagacaga
agtgcacgagggggaggaatgagccaatcacagcaggacactacagcggcctcacagcat
tctgaagtggacaatgccaagggtgtgggtggtagcatctacaagatcgaggagtcagaa
gtggggagtaagatgagtctctcccaggactccagcactgagaggggaaactggcagacc
aagtgggattatttcctctctgtcgcagggttctccatcggcctcgccaacgtgtggagg
ttcccttacctgtgttacatgaatggcggaggtgcattcctggtgccttacctgctggtg
ttggtggtggtgggtctgcccctctacctgctggagtccgccctcggtcagttctcctcc
tgcagctgcttcaccctttacgaagtctgccccatctttaaaggtgttggctacgcgacg
tttatcatgaatctggtgttcgtggcggtgtacagtgtggtcattgcctaccccctcgtc
ttcctctacaactccttcagtaccaagctgccctggtcctcctgcggcaacacatggaac
accccagcctgctccctcgcagagaaccggaactcaacgctcgctggagattctcaacaa
ctctctcctgctgatgaattttttcataacttcatcttggagatctcagatgacattacc
gagctggacggcttcttgtggccagttgtgggagcttccttcttcatctggacctttgtg
ttccttactgtcttcaagggcatcaatgtcttcgggaaggtggtatggttcacggcgatc
tttcccttcatcatgttgtttacacttctcatccggggcttgacactaccgggtgcttgg
gacggcatctacttctacatctggcctaactttgagaagctgaaggaactgaaggtatgg
gcagcagcggcgggccagatcttctactcactagggcctggctgggggatcctaaccaca
ctgggttcctacaacaagttccataacaagtgccagagagatgccgtattggtgcctatc
ctaaactgtgccacctccatcctggccgggtttgtggtcttctccgtcctgggcttcatg
gcgcaccgaactgggaccaccgtagagaaagttacttctgctggtcccgcccttgtgttt
atcacctacccagaggcgctctccctcatgcccttcgctcctctctgggccgtcctcttc
ttcctcatgatcttcttcctcggcatcgactccatgatcgcgcacatcgagacaacaact
gtgtcatttgtggacgagtttcctcagtaccgccaccgccgaggcctcgtcaccttcctt
gtgtgtttcttcgatatgctcgcctccctcctcttctgcaccaggggcgggatatactgg
ctaacgctggtggactggtacagcgcctcctacaccctcatactcaactgcctctgtgag
atcctcatctttggcttaatatacggagctggcaggacagtgagggacctgcagatcatg
accactgagaaggtcagctactactggtacgtcgtctggctggccgcagcccctaccgtc
ttactgctgatcttcatcaacacgatggtgagcaacgcgccagccagttatcgtggggag
gcgttcccaggctgggctcagggcattgggtggctcactgctcttgtctccatgctggct
atcccaatctacttcttctattacctcacctgtgcctcttcaggaagtctttcacagcgt
atggagtgcgggttgcagccagcagagtcatggggccctgcagtggagagccacagggaa
gagtgggaaactctgtgtaagcagcaacctctccgtcaccgcctccttcacccggacctc
ttcccaactttccccaactacaacctgacggagtcttcccgcgccttctcgaagccacag
gaccgagatttttcgcttaataattattcttcaaatattactcaagtttaa
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