Homarus americanus (American lobster): 121867644
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Entry
121867644 CDS
T07477
Name
(RefSeq) uncharacterized protein LOC121867644
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03020
RNA polymerase
hame03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121867644
09124 Replication and repair
03420 Nucleotide excision repair
121867644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121867644
03400 DNA repair and recombination proteins [BR:
hame03400
]
121867644
Enzymes [BR:
hame01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121867644
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121867644
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121867644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
121867644
NCBI-ProteinID:
XP_042223595
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MWGYGQLENILEVLCGSSNASNSSNEGAGSTDGAAGVGGSVPAAPSSLVGSSSGRREAAA
AVCLLVRLCSALLAGVQELQFTAMTTLNKIIDAAVVHRIGDLVIDPEEHLLPPGTDRKAK
IQLPLFHTYGGRLARQASKTESIVSGDGTPSSVGTPDSIPGRGTVGHYGQWMLMWRQHSA
KEDVEGDKGQHTTSIIGTLANITAVSILNVMHNAITLHKRTVGAKQQCQPSQRLRQCRSH
CLQILSSRVLLFMTHCPAIQSQLVEENRLRSLVAALDTTHDPQLLCSVLQVVATLGLNPH
YHQALLAAKIPDALTQLILPSDEWFYTNHSTRHARYVKHHAARTLVYLGLQHRVNHRVNV
YDLLLDEAPPPTPLGESSEDDYIMMTSAPPPIVTSHENKKVLGMSVEGMVLHTLKTLETT
TTAGMTPTGEGWNNMDWMSDPSEVTRGVRGVGKKVSSREDGPIGRRFLSCLMLGLPLVLH
PVIFLRLLLHRLLTSMHHLTKWKSCTSRSSWTSHSSELWRARSRTSSSETDASTLRKRRR
VNLTLDFAEACPEEPAFSPPERGQRNRPSPAVHRANSEEAPCKHYHRKASTPGSALSGPA
SSRKFRNTLVEALSTTDVSVTLQQLLPSRLRASDSHYSTSSSSKGTTPSGSPSFFQKRSF
RFSSLHKKRSKSVHDQINSSGSTPNISQSRDDLTLCEEDIMAFQRQLQNLPSYERIDDQD
VHTPPPFRQRSRSVPRVTFESMSTLLVPRPTPISRSPTATSELHTGLLSAQLTLPPSPHL
SPTTHLSPHHFASPHLSPSHSAHNIASSTPLHSPGIGSPRNLGSPVSSHVSPVSQRPNSP
FLSPGSPYSPHSLSSPRLRSPALSPITPPRNYATMSGADEAPLSALPSNLQAGGEDLRGV
GSSRSSSVTPTRYRRFDSPVYIVVDIPAVHRAVLLCVEEWLQSGGVQVEGNPTVVRELGE
FLTRVAQCGAPYQQWCDDLRSQWNITEFDGSDEEEDSVERINKDYCMCVTESQCIPTEYT
RDSICPVPSNRETTDLLIT
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtggggttatggtcagctggagaacatcctggaggtactgtgtggcagtagcaacgcc
agcaacagcagtaacgaaggtgcaggcagtacggacggagccgcaggcgttggcggaagt
gtcccagctgcaccttcatctcttgtgggttcgagcagcggccgacgtgaagctgcggct
gcggtttgtcttctggtgcggttgtgttcggcgctgcttgcgggtgtacaggagcttcag
ttcacagccatgacgacgcttaacaagatcattgacgctgccgtggtgcaccgtattggg
gacctggtgattgaccctgaggaacacctactgcctcccggtactgacaggaaagccaag
atccagcttccactgttccatacatacggtggccgacttgctcgtcaggccagcaagacg
gagagtattgttagtggcgatggtacccccagttctgttggtacccctgactctatcccg
ggccgtggtactgtcgggcattacggtcagtggatgttaatgtggcgacaacattcagcc
aaggaagatgttgagggtgataagggacaacacacaacatccattatcgggaccctggcc
aacataacagctgtgtctatcttgaatgttatgcacaatgccatcaccttacacaagcgg
acggtgggggccaaacagcagtgccaacccagtcagagactccgccagtgtcgctctcac
tgtctccagatattaagttctcgtgttctgttgtttatgactcactgcccggccatccaa
tcacaactcgtagaggagaatagacttcgctcattggttgccgccctcgacaccacacat
gacccgcaactcttatgttcagtactacaagtggtggcaacattaggactcaacccgcac
taccaccaggctctcctagctgctaagatacctgacgcccttacccagctcatcttgcct
tccgatgaatggttctacactaatcactccaccagacatgctcgctatgttaagcatcac
gcggcacggactttggtttatctgggtttacagcatcgtgtcaatcatagagttaatgtt
tatgatttgttgttagacgaggcacctccaccaacgcctctgggggagagttctgaggac
gactacatcatgatgacgtcagccccgcctcccatagtgacgtcacacgagaacaagaag
gtcttgggcatgtcagtggagggcatggtgctgcataccctcaagaccttagagacgacc
actacagccggcatgactccaacaggtgaaggctggaacaacatggactggatgtcagac
cccagcgaggtgacaagaggtgtgcggggggtcgggaagaaggtctcatcgagggaggac
ggccccataggtcgtcggtttctctcgtgccttatgctgggtctgccgctggtgctccac
ccggtcatctttctccgactcctgctccaccggctcctcacctccatgcaccacctcacc
aagtggaagtcttgcacctcccgctcctcctggacctcccactcctcggagctgtggcgt
gcacgctcccgcacctcctcctccgagacggatgcctccacactccgcaagaggcggagg
gtcaacctcacgctggattttgcggaagcttgccccgaggagccggccttttcgccccca
gaacgtggccaacggaaccgaccttccccggccgttcatcgagctaacagtgaggaggcg
ccgtgtaaacactaccacaggaaggcgtccacaccaggaagtgctctctcggggccggcg
tccagccgtaagtttcgcaacaccctggtggaagctctgagcaccacagacgtgagtgtc
accctccagcagctgctgccctctagactgagggcctcagactcccactactccaccagt
agctcctccaagggcaccacaccgtctggctcaccatcgttcttccagaaaagaagcttt
aggttctccagcctccacaagaaaaggtccaagtcggtacacgatcagatcaactcctct
gggtcgacgcccaacatctctcagtcccgtgacgacctgaccctgtgtgaggaggatatt
atggcctttcagcggcagctacagaacctgccatcttacgagcgcatcgatgaccaggac
gtgcacacgccgccgcccttcagacaacggtcacggtcggtgccgcgcgtcaccttcgag
agcatgtcgaccctcctggtgcctcggccaacacccatcagccgctcgcccaccgccacc
tccgagctgcacacagggctgctgtcggcccagctgactctgccacccagccctcacctg
tcacccactactcacctctcgcctcatcacttcgcctcccctcacctctcaccgtctcac
tcagcccacaacatcgcctcttccacgccactccactcacctggcatcgggtcaccacgt
aacctagggtcaccggtctcctcgcacgtctccccggtctcacaaagaccaaactcccca
ttcctgtctcctggctcaccttactccccacactctctatcctccccacggctacgctcc
ccagctctctctcccatcacacccccgcgaaactacgccaccatgtctggggcagatgag
gcgccgctgtccgccctgccctccaaccttcaggcgggcggggaggaccttcgtggtgtg
gggtcgtctcgctccagctccgtcacccccaccaggtaccgacggtttgactccccggta
tatatagtggtggacatccctgcagtgcaccgagctgtcctgctgtgtgttgaggagtgg
ctacagtcaggtggggtacaggtggaaggcaatcccactgtggtccgtgaacttggcgaa
ttcctgacgagggtggcacagtgtggagccccttatcaacaatggtgtgacgacctgcgc
tcacagtggaacatcacggagtttgacggcagtgacgaagaggaagacagtgtggaaaga
atcaataaagactactgtatgtgcgtaacagagagccagtgcataccaacagaatatacc
agagacagtatatgcccagtaccttccaacagagaaactactgacctcctaatcacctaa
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