Homarus americanus (American lobster): 121868029
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Entry
121868029 CDS
T07477
Name
(RefSeq) DNA repair and recombination protein RAD54B-like isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121868029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hame03400
]
121868029
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
121868029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DUF6482
Motif
Other DBs
NCBI-GeneID:
121868029
NCBI-ProteinID:
XP_042224209
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MRRSAAPSQLLHKRTLFTPPFAKRRCPDTHTDDVPKASALPQTVENNVKVRDGPVRSSSD
ILSLIKKPSTITETSCVRQCSNGVPECDTGQENAPTDSVTVLSPLRETHSNTLRSTGDAN
KRFPAQQLGTASRMLGGYARVGKGPQGIPGHRRSVVPAQEENQEAQAVKYYSVVWCKFSR
KKHKNWEGDAVLIVKSRSVILKDTEGKEIGRRTGYKLKDLSSLEEGSTLLVGGGKEVEIQ
GTISAESYARGECFLGQIPVLQNIDEAQEKRSQPPKPKPFRLPTLGRPKDKNTNTAVGPL
FDPTKPDALVMPSPPSQHQWKNNCGGAAVVDVVIDPHVSGQLRPHQQEGVIFLYECIMGY
RHLDNYGAILADEMGLGKTLQCITLVWTLLKQGPYGGRSVVKKVLIVTPSSLTNNWSKEF
SKWLGRERVNVYIVDQNNKVEQFEKQKHSEIMIISYEMFVRSSKIIEALNFDLVLCDEGH
RLKNTNIKTAHLLGGLRCRRRVILTGTPVQNDLQELFALVEFVNPGVLGSSLSFRHIYED
PIIASQQPNASQTEKELGASRATQLNKITSLFILRRTQDIINRYLPPKVEFVVFCQPSET
QVSVYMDLVGCRSLKKCFSNVEPGDNLSAILALRKLCNHPALLAADKDQENKSDVVQEAA
NLLPPHIQPGVYDEGDSGKLAVVSCILWALREPGTEKIVLVSNYTTTLDMLAALCTRYNY
PYLRLDGSTPTNKRQQLVDRFNSKYSKDFVFLLSSKAGGVGLNLIGASRILLYDIDWNPA
TDLQAMARVWRDGQKRKVYIYRLLMTGSMDEKMYQRQVKKQGLSGAVVDARDTDRVHFST
EELKDLFTIHCETMCLTHDLLECECDLQGGGSQVTHQHQVNKSPDRACQLYGGECPGGSL
STTSTSTMDQLHNWCHLAPPFSSAVVKDPCLEAASDFISFLFCNESNTEIMKMPSAP
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggtcagcggctccctcacagctgctgcacaagaggacattattcacgccacca
tttgccaagcgacgatgcccggacacacacactgatgatgtaccaaaagccagtgcatta
cctcaaactgtagaaaataacgtgaaagtgagagatggaccagttcgcagttcctctgac
atcctctccttgattaagaaaccatcaaccataacagagacaagttgtgtgaggcagtgc
agtaatggtgtaccagagtgtgatactggacaagaaaatgcaccaacagactcagtcact
gtactgtctcctttaagagagactcatagtaatacattgaggtctactggtgatgccaat
aaaagattcccagcacaacaacttggtacagcatcaagaatgttaggtgggtatgccagg
gttgggaagggtccgcaggggatcccaggacaccgccgcagtgttgtcccagcacaagag
gagaaccaggaggctcaggcagttaaatattactctgtagtttggtgtaaattttctcga
aaaaaacacaaaaattgggaaggtgacgcagtgctgattgtgaagagcagatctgtcatc
ctcaaggacacagagggaaaggagattggtcgaagaacaggatacaagctgaaagactta
tcatctttggaggaaggaagtactcttcttgtaggaggcggtaaggaagttgagattcaa
ggaaccattagtgctgagagctatgccagaggggaatgctttctgggacaaatacctgta
cttcagaacatagatgaggcccaggaaaaaagaagccaaccaccaaagccaaagcctttt
cgtctccctactctgggtcgtcctaaagacaagaacactaacactgccgttggtcccctg
tttgaccctacaaaacctgatgcccttgtaatgccaagccctccatcccagcatcagtgg
aagaacaactgtggcggagcggcggtggtggacgtggtgatagatccacacgttagtgga
cagctgcggccccaccagcaggaaggcgtcatcttcctgtacgagtgcatcatgggctac
aggcacttagataactatggggcaatattagctgatgaaatgggccttggcaagacactg
cagtgtattaccttggtgtggacattactcaagcagggtccctatggtggaagatcagtt
gtgaagaaagttttgattgttactccctctagtctaacaaacaactggagtaaagagttc
tctaaatggctgggcagagagagagtcaacgtctacatcgtggatcaaaacaacaaggtt
gagcagtttgagaagcagaagcactcggagatcatgattatctcgtatgaaatgtttgtg
cgtagttctaaaattattgaggccctcaactttgatctggttctgtgtgacgagggacac
cgtctgaaaaacaccaacatcaagactgcgcacctcctgggtggtctgaggtgcaggagg
cgggtcatacttacaggaactccggtgcaaaatgatctgcaggagttgtttgctctcgtg
gaatttgtgaatccaggagtgttgggatcatcgttgtccttccgtcacatatacgaggat
cccataatcgcttcccaacagccaaatgcctcacagactgaaaaggaattaggtgctagc
cgagccacacagctgaataaaataacatctctcttcatcctccgacgcactcaggatatc
atcaacagatacctgccacccaaagtagagtttgtggtgttctgtcagccatcagagaca
caggtgtctgtatatatggatttggtaggttgtcggagcctaaagaagtgtttcagtaat
gttgaaccaggagataacttatctgccattttagctttacgtaagttgtgcaaccaccct
gccttattagctgctgacaaggatcaagaaaacaagagtgatgtagtacaggaagctgcc
aatttgctgccacctcacatacagcctggagtatatgatgaaggggacagtggcaagtta
gcagtagtatcatgtatcctctgggcactgagagaaccaggaacagagaagatcgtcctg
gtatcaaactacaccaccacattagatatgctggccgccctctgcacgcgctacaactac
ccctaccttaggctggatggatccacgccaactaacaaacgtcaacagctggtggacaga
tttaacagcaaatattctaaagactttgtgtttctactgagttcaaaggcagggggggtt
ggcctcaacttgatcggagcgtcaagaattctgttgtatgacattgactggaaccccgcc
accgacttacaagctatggcacgagtctggagggacggccagaagagaaaggtctacata
tatagattattaatgactggatcaatggatgagaagatgtatcaacgacaagtaaagaaa
caagggctcagtggagctgtggtggatgctcgggacactgacagggtccacttttcgact
gaagaactcaaggatcttttcacaatacactgtgagacaatgtgcctgacacatgacttg
ttagagtgcgagtgtgacctccagggtggtggttcacaggtcacacaccaacaccaagtt
aacaagtctcctgacagagcttgccagttgtatggtggagaatgccctggaggttctctc
agcaccacctccacctccaccatggatcagctacataattggtgccatcttgctccacca
ttttcatctgctgttgtcaaggatccatgtttggaagcagcaagtgactttataagtttt
ttattctgcaatgaatcaaacactgaaataatgaagatgccgtctgcaccataa
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