Homarus americanus (American lobster): 121868288
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Entry
121868288 CDS
T07477
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hame04131
]
121868288
Membrane trafficking [BR:
hame04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
121868288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
121868288
NCBI-ProteinID:
XP_042224654
LinkDB
All DBs
Position
Unknown
AA seq
1587 aa
AA seq
DB search
MYYPVGLPKRLRIPEAGDGQLKAGDGQLKAIVCNRDRILFAILTETSIWIWFSRPCVPIV
VHRRSDESVNTIGTNQLLEWRPDSSMIVVATNKNRLIFYSIIVDESRREVYEQRDPPNPT
LKRESAELYTCESIPPLTFSMAFETEVSGGVTGLVCLRDELMVATGTGHIQRLRWDGSLN
YDYCVDLRRVPFCDDQLVMKAVPLDTPGVHVVDLEYSPLVGGFAVVLSDGRAAFLTASTL
KFDPNAVQGIWARDLDDATCAAINHKYRLLAYGRANSQGVVYMVDEATGGLEVSHRMILS
DRDYGGSPGPVGYMKWTPDGTVLSLSWEGGGLSLWSVFGSLLTVSLRWDYTDDPLSKAIT
ITNMEWGAEGYEVWCIQQHEKLEEQQEKTQEESYQYQRRPGEHMRREATETVTSGEDAGV
EESRCEGKTQTSVLQFSFIKSALTVNPCMSRLVRVLLQGSDRLYLNTSEGLAGVADVPHD
SLSLYFDDDEEGAFEDPIHHRDSQFSVAANKQWIVIPIPYNYTSSNWPIRYTCVDEGGVL
VGVAGRNGVAHYSLRLRRWHLFGNESQERDFVVTGGLLWWQSNWLVLGAYNIPANTDELR
LYPRDHKLDNLYVTTVPQPAQVLLLNIYGDQLIVLTADCHITVYNLQPTETNSGGGNVLV
SRVQEVDISGLTVHPACVVSVLLTSLRTESWRVHNNQQTPLPAQSVIINISGKVLMIQRD
HRSDGGNTNGKLFQCAQMTPIVLASSCEALWCSSSAVSHKPHLSHALWLHCGVHGTRAWL
PLFPNSADKSHTFMARRIMLPFTPSIYPLAVMFEEGIMLGAETDTSLLACDATSLYQPLT
VVERTSQVYLHHLLRQLLRRNLGYHAWEVASTCRDLPYFPHALELLLHQVLEEEASSKDP
LPDCLLPRVVEFIREFPVYLQTVVQCARKTELALWRYLFSAAGSPKHLFIKALEESQLDT
AASYLIILQNLESATVSRSHATRLLDATLEAGKWDLSKDLIRFLRSIDPTDLDSPKPSLP
SCGSTKVGFSHATPPVSPACADEDLSMILPNTQIKQMLRRHSSVLITGPQVLRGRSFSSA
SAPKIALGDSGSVAHQSVLRTTSDSAKVLPEINRQSQAVPAARKRSSNSISKDVSTAEEF
FLDVILQRHAKKLLLGCRLRDLGTMAAHLDFPLVSWLRRERSRASRVDDFVASLKQIHRD
FSWPYPSVPTSHIRRYSVSSLRSVASPNERSVLVEERMHGLSITVPKVASLGTGEIGDSG
YLSQATGDTHTVTPQHGPHSPTSPYSISEVVPRQALLLPQSPRAGDTASVMSEEGTTYGD
DTSSICGDWSPESGDPTRDLLSRPPDPPPQATPRPPPHAEVQLRYLLQVLLEAGCLEWSV
VVAVVLRDALAVLRVVTLARASDIPAQVITRLTSGLQDLLHFTNTECLGYQNFLGAIMSQ
VKVLERLASTREISRTPSPPSSRPPSTSHESEPSPIQEASLRSSVQTSSPPLSHQQNQQH
QSLKQQQQLQSQQPVQQSQQLPQQQQIQQPLPHPSLPRMSLLPCQTSVAGETLPEETLSQ
ASEEGLLDTEGDVTPVEEGGSAACVIS
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgtattatccggtggggcttcctaagcgacttaggattcctgaggccggtgatggccag
ttaaaggctggagatggccagctgaaggccatcgtatgtaaccgtgacaggatcctcttc
gcaattctcacagaaacatccatttggatttggtttagcagaccatgtgtacctattgtt
gttcaccgtcgatcagatgagtcagtcaacaccattgggaccaatcaacttttggagtgg
aggcctgactcatcaatgattgttgtagctaccaacaaaaatcgtcttatattttactca
atcattgtggatgagtcacgccgggaagtgtatgaacagcgggacccaccaaacccaact
ttgaagcgagaatcagcagagctctacacatgtgaatcaatacctccccttacgttttct
atggcttttgaaactgaagtatctggaggggtaactggcctggtgtgtctgcgtgatgag
ttaatggtggccacaggaactggtcatattcaaagactgcgatgggatggttcactcaac
tatgactactgtgtggacttacgcagggttcctttctgtgatgaccagcttgttatgaaa
gctgttccactagacaccccaggagttcatgtggtagatttggagtattcccctttagtg
ggaggctttgcagtagttcttagtgatggccgagcagcatttctcactgcctctacattg
aaatttgatccaaatgctgtgcaaggaatctgggcacgggatctggatgatgccacgtgt
gctgccatcaaccacaagtatagattactggcctatggtcgagctaactctcagggtgtt
gtttacatggtagatgaagctacaggtggcttagaagtatcccatagaatgatcctctct
gacagagattatggaggttcccctggcccagttgggtatatgaagtggactccagatggt
acagtgttaagtttaagttgggaaggtggtggcctgtccctgtggagtgtatttggttca
ttgctcactgtatccttacgttgggactacactgatgatcctctgtcaaaagccattacc
atcaccaacatggaatggggtgcagagggctatgaggtatggtgtatacaacaacatgag
aaattggaagaacaacaggaaaaaactcaagaagaatcctatcagtatcagagaaggcca
ggagaacacatgagaagagaagcaacagaaacagtaacttcaggtgaagatgctggggtg
gaagaatctcggtgtgaaggtaaaactcaaacatctgtcctgcagttttccttcatcaag
agtgctcttacagtgaacccgtgtatgagtcggttagtgcgggttctactacaaggaagt
gatcgtctctacctcaacacttcagaaggtcttgcaggtgttgctgatgtacctcatgat
tccctttctttatattttgatgatgacgaggaaggtgcttttgaagatcctatccatcac
agagattcacaattcagtgtagcagctaataaacagtggatcgttattccaataccatat
aattatacttcttcaaactggcccattaggtacacatgtgtggatgaaggtggtgtactt
gtgggtgtggccggacgcaatggtgtggcacattactcacttcgactccgacgatggcat
ctctttggcaatgagagtcaagagcgtgactttgtagtaactggaggcttattatggtgg
caatcaaattggctagtgctgggggcttacaacatccctgctaatactgatgagctcaga
ctttatcctcgtgatcacaagttggataatctttatgttactactgtcccacagccagct
caggttctgttgttaaatatatatggtgatcagctgattgttctcactgctgattgtcac
ataacagtgtataatcttcaaccaacagaaacaaactctggtggtggcaacgtattagtg
tctcgtgtgcaagaggttgatatatctggattaacggtacacccagcgtgtgtggtgtct
gtgctgctcaccagtctacgcaccgagtcatggcgggtacataacaatcaacaaacaccc
ttacctgctcagagtgtcatcatcaatatatcaggcaaggttctcatgattcagagagat
catcgctctgatggaggaaacaccaatggaaaactgttccagtgtgcccagatgacacca
attgttttggcatcaagctgtgaggctttgtggtgtagtagttctgctgttagccacaag
ccacatcttagtcatgctctatggttgcactgtggtgttcatggaactcgtgcttggctt
ccactttttccaaactctgctgacaagtcccacacattcatggccagaaggattatgttg
cccttcactccgtccatttaccctctagctgtaatgtttgaagagggcatcatgttaggt
gcagagacagacacctctttattagcgtgtgatgccacatctctgtatcaaccactcact
gttgtggaacgaactagtcaggtgtacctccatcatttgttacgtcagctgttaagaaga
aatcttggctaccatgcatgggaggtggccagcacctgtagagacttgccgtactttcct
catgcgcttgaactcttgcttcatcaggttcttgaggaggaagcatccagcaaggatcca
cttccagactgcttactaccgagggttgttgaatttattcgagaatttccagtttatctg
cagacagtagtgcaatgtgcccgcaaaacagaactagcattgtggcgatatctcttttct
gctgctggaagcccaaaacatctttttatcaaagccctggaagaatcacagctggatact
gcagcatcctaccttatcattttgcagaatttggaaagtgctacagttagtcgaagtcat
gctactcgtctcttggatgcaaccctagaggctggcaagtgggatctcagtaaagatctt
attcgctttcttcgttccattgatccaacagacctggactcacccaaaccatctttgcca
tcttgtgggagcactaaggtggggttcagtcatgctacacctccagtgtctcctgcatgt
gccgatgaggacctttcaatgatccttcccaacactcagatcaaacagatgttgagaaga
cattcttctgttctgatcaccggtcctcaggttctacgtggacggtcgttctcatcggct
tctgctcctaagattgctttgggagacagtggctcagtggcacatcagtctgttttgaga
accacttcagattcagccaaagttttacctgaaattaatagacaaagtcaggctgtacct
gctgcccgaaaacgttcgagtaattcaataagcaaagatgtgtccactgcagaagaattc
tttcttgatgtcattctgcagagacatgccaagaaattactacttgggtgtcgtctgcga
gatttaggtacaatggccgcccatttagacttcccgttggtgtcatggctaagaagagag
cgaagtagagcatcccgtgttgatgattttgtagcatcgttaaagcagatacacagagac
ttctcatggccctacccatccgtcccaacatctcatattcgacgttattctgtatcatct
cttcgttctgttgcaagcccaaatgagaggtcagttcttgtggaggagaggatgcacggt
ctctccatcactgtgccaaaggttgcttcccttggtacgggtgagattggcgacagcggg
tacttgagtcaagcaacgggagacactcacacagtaactccccagcatggcccccactct
cctactagcccatattctatatcggaggtggttcctcgacaagctcttctgctgccacag
tctcccagagctggtgatacagcaagtgtcatgagtgaagaaggcactacatatggtgat
gacacatccagtatatgtggagactggagtcctgaaagtggtgatccaacacgggatctt
ctgtctagacctccagatcctccaccccaagcaacacccagaccacccccccatgcagaa
gttcagcttagatacttactgcaggtacttctggaggctgggtgcctggagtggagtgtg
gtggttgctgtggtgctacgagatgccctggctgtgttgagagtggtgacactggctcgg
gcctccgacatccctgctcaagtcataactagacttacatcaggcctacaagacttgtta
cattttacaaacactgaatgcttggggtaccaaaattttcttggagctataatgagtcaa
gttaaagtattggaaaggctagccagtacaagagagatatctaggactccaagtccccct
tcttctcgtcctccctcaactagccatgaatccgagccttcacccatccaggaggcctcc
ctcaggtcttccgtgcaaacttcatctccaccactttctcatcaacaaaaccaacaacac
caatcattaaaacagcaacagcagttgcaaagtcaacagcctgttcaacaatcacaacag
ttgcctcaacagcaacagattcagcagccattgccacatcccagcctaccacgaatgtct
ttactaccatgccaaacatcagttgcaggggaaactctacccgaggagacattatctcaa
gcttctgaagaaggccttttggatacagaaggtgatgttactcctgttgaggaagggggt
agtgctgcatgtgtgatttcatag
DBGET
integrated database retrieval system
