Homarus americanus (American lobster): 121868304
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Entry
121868304 CDS
T07477
Name
(RefSeq) exosome complex component RRP41-like
KO
K11600
exosome complex component RRP41
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121868304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121868304
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121868304
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
121868304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DpnI
Motif
Other DBs
NCBI-GeneID:
121868304
NCBI-ProteinID:
XP_042224704
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MEVISPEGMRQDGRTPLCLRTISCRMGLYERPNGSAYIEMGNTKVLAAVYGPREVRSVSK
QQLDECVIQCQMSRIAASQGERVKRPRDQRTRAIGQQIAGVFHAAIRKSKYPGSQIDIFV
QVLQADGGVMSACINASTLALIHAGVELVDYVASCTASINRQTPLLDVTNQESMSGCEVT
VSILPNKGSIVSLDTSNTVHQDQFESVLDLAMLGAQQVYEEMHREVENYLEDKHAIMSHR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaggttatatcaccagagggcatgcgtcaggatggcagaacaccactttgtctgcgt
acaatcagttgccgaatggggctgtatgagagacctaatggcagtgcttacattgaaatg
ggaaatacaaaagttcttgctgctgtttatggacccagagaggttcggagtgtcagtaag
caacagctggatgagtgtgttatccagtgccagatgagtcgcattgctgctagtcaagga
gaaagagtgaagcgtcccagagaccagagaacccgagcaataggtcaacaaattgcaggt
gtatttcatgcagcaatacgaaagagcaaatatcctggctcacaaattgacatttttgtg
caggtcttacaagcagatggaggtgtaatgtcagcttgcatcaatgcctcaaccttagcc
ctcatccatgcaggtgtagaattggtagactacgtggcatcctgcaccgcctcaattaac
agacaaactccactccttgatgtaacaaaccaggaatctatgtcgggttgcgaggtaact
gtctccatcctgccaaacaaaggttcaatagtttctctggatacatcaaacactgttcat
caggatcaatttgaatctgtgttggaccttgccatgctgggagctcaacaggtatatgaa
gagatgcacagggaggttgagaattacctggaagataaacatgccataatgtctcatagg
taa
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