Homarus americanus (American lobster): 121868426
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Entry
121868426 CDS
T07477
Name
(RefSeq) transcriptional repressor CTCFL-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hame03000
]
121868426
03036 Chromosome and associated proteins [BR:
hame03036
]
121868426
Transcription factors [BR:
hame03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121868426
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121868426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-met
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_11
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
121868426
NCBI-ProteinID:
XP_042224991
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MIQAMEALFRKERIKWLEEIVCRGGQRRGGHWMEGSQGGETISDIHNYLDTFNKEIQTGD
QAPTADVAQVFVDESGQYFYQNVDGSQQQMVVVSSDGTDGSEGEGGGADGSVMLNAEEDS
LNDDGDSLSQGQVALGEDGTLQVIPGMEQGEGNNQVVLNTGDNNQIVTIVPSSTNPGEVS
YVLIVEQSGDNDKDDTVYDFNEADEGLSYESGEEDDKKMMRIIHKKSQTVTQAHMCNYCN
YTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGIKPHRCKFCESTFT
TSGELVRHVRYIHTHEKPHKCPDCDYASVELSKLKRHMRCHSGERPYQCPHCTYASPDTF
KLKRHLRIHTGEKPYECEICRARFTQSNSLKAHKLIHTDVASGNKPVYACELCPTTCGRK
TDLRIHVQKLHTSDKPLKCKKCGKAFPDRYTFKQHNKSHEGEKCFKCDLCPYASTSARHL
ESHMLVHTEQKPYQCDQCDQAFRQKQLLKRHQNLYHNPEYIPPMPREKTQECPECGKAFR
HKGNLIRHMAIHDPDASAQEKAQALKIGRQKRLQLINGQQVEMYTGDVDEDEIMAVEGQD
GNQYVVLEVIQLQDGESHMMMSDGIPVTDGTLETAVGGVLGSSPLMVPETITGDTITGDT
IGPVDGACLVSESSLLELQHKKTEMKTEISAEAKKEAQKEMETCFGFDDEDEGQIHLQFG
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatacaagcaatggaggctctgtttaggaaggagagaattaaatggctggaggagata
gtttgtaggggaggacagaggagaggcggccattggatggaggggagccaaggtggagaa
actataagtgacatacacaactacctcgacacatttaataaagagatccagacgggggat
caagcacccacagccgatgtagctcaagtttttgtagatgaatctggtcaatacttctac
caaaatgttgatggcagtcagcaacagatggtagtggtgtcgtctgatgggacagatggc
tcagagggggaaggtggtggtgccgatggctctgtaatgttgaatgcagaggaagattca
ctcaatgatgatggagacagtttatcccagggtcaggtggccctgggcgaggatgggaca
ctgcaggttatacccggtatggaacaaggggaaggcaataaccaggttgtgcttaataca
ggagataataatcaaatagtaactatcgtcccatcatccacgaacccgggtgaagtgagt
tatgttttgatcgtcgaacagtctggtgacaacgacaaagacgatactgtatatgatttc
aacgaagcggatgaaggccttagctatgaatcgggggaagaagatgacaagaagatgatg
cgtattattcacaaaaaatcacaaacagttactcaagcccacatgtgtaactattgtaac
tacaccagtccaaaaagatacctactttcaagacacatgaaatctcacagtgaagagcgg
ccgcataaatgttctgtctgtgaacgagggttcaaaactttagcttctctccaaaaccac
gttaacacacacacaggcatcaaacctcatcgatgcaagttttgtgaaagcacgtttact
acatctggtgagcttgttcgacatgttcgctacatacacacccacgaaaagcctcataag
tgtccagactgtgattatgccagcgtagaacttagcaaattgaagcgtcacatgcgttgt
cactctggagagcgaccgtatcagtgcccacattgtacttacgccagtcctgacaccttc
aagttgaagagacacttaaggattcacacgggagaaaagccatatgagtgcgagatctgt
cgtgcacgttttacgcagtcaaactctttgaaggctcacaaattgatacacacagatgtt
gcatcagggaacaagccggtatatgcctgtgagctctgcccaacgacgtgtggccgcaag
actgatctccgaatacatgtgcagaagcttcatacctctgacaaacctctgaagtgcaag
aaatgtggcaaggccttccctgataggtacacattcaaacagcacaacaagtctcatgag
ggagagaagtgtttcaagtgtgacctgtgtccttatgcttcaacttctgcaagacatcta
gaatcccacatgcttgtacacacggaacagaagccttaccagtgtgatcagtgtgaccag
gctttccgtcaaaagcagttgctgaagaggcatcaaaatctttaccacaacccagaatac
atcccccccatgcccagagagaagacgcaagaatgtccagagtgtgggaaggcatttagg
cataaaggtaacttgattagacatatggccatccatgatcctgatgcctctgcacaggaa
aaggcacaagcactgaagattggaagacaaaaaagattacagcttattaatggtcaacaa
gttgagatgtacaccggagacgttgatgaagatgagattatggctgtggagggtcaggat
ggtaaccagtatgtggtccttgaggtcatacagcttcaggatggcgaaagtcacatgatg
atgtcagatgggataccagtaacggacggtactctagaaacggcagtaggcggagtttta
gggtcctcacctcttatggttccggagactataacgggtgatacaattactggagatacc
ataggcccagtagatggagcctgtttagtatcagaatcttccctcctggaactccagcac
aagaaaacggaaatgaaaacagaaattagtgccgaggccaagaaggaggctcagaaagaa
atggaaacctgctttggttttgatgatgaggatgaaggacaaattcaccttcagtttgga
gaatga
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