Homarus americanus (American lobster): 121868718
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Entry
121868718 CDS
T07477
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121868718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
LAMB1
Motif
Other DBs
NCBI-GeneID:
121868718
NCBI-ProteinID:
XP_042225498
LinkDB
All DBs
Position
Unknown
AA seq
2192 aa
AA seq
DB search
MKIIHLYGICLLILFAVVCPGDAEAQSDPRGAGGVVYGRSYVPSTNRRGRDRGRSRQTSS
AISSSSSSSSTSVTGPDGVTQETVSYTSYGSPGSGAHNTSHTYTTVNSETDSTGQSSDTG
SSSTSSVTSSSRRSSSRRGSSRSKSRSRSRGRGRKVEKAVEEEGEEETPSVVDKSYFNRH
RGQTEDGQDYFRWNGHEYTGVRRPGSSISRRVKTTKTTTTTTTQTRPGSSLTTYTYTVPG
SSNVTTYRNTTTYSSRVPGQSTSLESQRGSSSSHSSNTRYETSYNRRYDSRGGGSTSSSS
SSTSGGISGGGGGGGSTRSSSSYTSGGIISGGGGGGSRQRGDVGFGESYHRNTEEEQHTL
DYEEEDYDEEFARGPIISEVDSKHPFVVRGFGASSGYGQRSSHPCDQSSCYPATGNLLIG
REKSLSAISTCGLYRRERYCIVSHLKDRKKCFWCDSRPRFDGSPQYSHKIDNIVYRFDRR
TQRRSWWQSENGVEDSSIQLNLEAEFHFTHLIITFRTFRPSAMLIERSFDFGKTWKVYRY
FAYDCNDAFPGVPQGPPTSINDVVCESRYSAVEPSTEGEVIFRVLPPNIEIENPYSDEVQ
NLLKITNLRVNFTKLHTLGDQLLDNRREIKEKYYYAIYDMVVRGSCSCYGHASRCLPLEG
VEDRPDMVHGRCECTHNTKGLNCENCEDFYNDLPWRPAVGQESNACKRCNCNNHASFCHF
DPQVYEDTGRISGGVCDDCSHNTQGRSCEECVPFYYQDPSRDIRDAEVCQPCNCDNRGSI
DNAICDSRTDVASGLLAGRCHCKTYVDGLKCDRCRAGYWNFSAENPEGCQRITEDYYSQP
KSEWPRKPCSCDLLGTVNNMGCNVQTGECSCKRFVTGRDCNQCLPQHYGLSEHPDGCQPC
NCDKGGSLDNNCDVLNGQCKCRPHVSGRRCDVPEEGYYVATLNYLTYEAELARGSELYCE
EASLYDARQSSGSNCQVVMREPYRDGRETTWTGLGFMRVFEGSYLEFEVENIETSMEYDL
VLRYEPQFRGDWENIMVTVERPEPIDPTGPCGNSRPIDDQMIISLPDSRRQVTLFPPVCL
ESGKRYKIRVDFRRSNARTDSPSASILVDSIMLIPRAEKLPFYSGSFENDDLRYEYERYR
CSESFYDGQGVATVPEVCRDNHLDSIGFYVYGQAFSCQCDGTGSYSSICSSLGGQCDCKP
NVVGRRCDRCAPGTFGFGPEGCKACGCSPVGALDNFCDQQTGQCKCRPNTYGRQCDECQP
GFWNFPNCQRCECNGHADTCDSYTGVCHECRDNTSGPNCALCIDGFYGDPRLDVGIACRR
CPCPGTVDSGHSFADRCSLDPRTKDVVCECEVGYAGARCDVCADNYFGNPEISGGSCQSC
NCNNNIDISRPGNCDKHTGECQQCLFNSFGFYCERCQPGFYGDALHQQCRECVCNILGSN
QTIGVCDHETGQCPCLPNVLGLECDHCAPNHWKIASGMGCEACACDPVGSYSDQCNEQYR
QGYGGHSNSFDGICECRPGFGGRQCNQCQTNFYGNPRIECLACNCNFEGSETLQCDHDTG
RCKCREGIGGNKCDECARGFTGRAPYCQPCGECFDNWDLILKELKERTESLIHAAGEIKQ
TGATGAYSHEFESMEEKIDDVRDILLSANMTSDSLVSLEDVIAQLSANLSSAAADLQGLE
QGVDNTTQRISLATNALADLRLQAEELRNQAGDQKEEATKLQEANVEGALNLTRHAGERS
RAAQERVEFTRVIVSESERNRRRTENLLLHAGDRFNRTQDENEANLASLSELLDDMDDGM
PDLNEQVCDRRGDPCDTYCGGAGCGKCGGLSCNDGLVNIAETALKFADDAEETLKKKEAS
ADELLRGVSGAKRQSDIAFDLAKMAFSMTFEARNMTDSYKAAISRLIEEIQEYFSTPGAK
PKEIRIIAEEVLGLDISLKPEQITDLAERITLTIESLTNIDAIIDATRNDLASAVELKER
ADQAKKKAEETLNVAERVVEALDEAGVAQDAAEEAVMKASNDIDITQTHLTQIASETSDA
QVKANSSLKEVQRLEDRVEEVKLQYKINQRHLEDTTNVVSQAALKSQRAANDARQLEDKY
LTVEESLVLKSKAAEDARRRAEDLKKRANKLASEAFSKLDTLNEIEEAFQSNEQILENYE
EEIRRMEISMVEYHEYILKKTEFYATCHSGTR
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcattcacttgtacggaatatgtttattaatactatttgcggtcgtttgtcca
ggggacgccgaggctcagtctgatcctcggggggcgggcggcgtcgtctacggtcggtcc
tacgttccgtctactaacaggcggggcagagaccgaggccgatcccgccaaacttcctca
gccatttcttcttcctcctcctcctcttccacctcggtgacgggcccggatggggtgacc
caggaaactgtgagttacacatcctacggcagccccggctcgggcgcccacaacacctcc
cacacctacactaccgtcaattcagagactgactccacaggtcaaagtagcgataccggt
tcttcttccacctcctctgtcacttcttcctcccgacggtcatcctctaggcgtggctcc
tcgagatcaaaatctagatcgagatcacgaggtcgagggaggaaggtagaaaaggcagtg
gaggaggagggggaggaagagactccatctgttgtggataagtcgtacttcaaccggcat
cgcgggcagaccgaagacggtcaagactattttcgctggaacggtcatgaatatacgggt
gtccgccgcccagggtcgtccatctcacggcgcgttaagaccactaaaaccaccaccact
accaccacccaaacacgtccaggctcatcactcaccacctacacttacacagttcccggg
agctcgaacgtgaccacctacaggaacaccaccacctattcttcccgtgtcccaggacag
tccacctcgttggagagccagagaggctcctcgtcctcacactcctccaacacacgctac
gagacttcttacaaccgtcgctatgactcccgtggcggtggctccaccagctcctcttcc
tcctccaccagcggaggcatcagtggaggaggtggtggcggtggctccaccagatcctct
tcctcctacaccagcggaggcatcatcagtggaggaggtggtggtggcagtagacagagg
ggtgatgtgggatttggtgagagttaccacaggaacaccgaggaggagcaacacacactg
gactatgaagaagaggactacgatgaggagttcgcccgcggccccatcatctctgaggtg
gacagcaagcatcccttcgtcgtgcgagggtttggcgcctcgtcaggttatggccagagg
tcatcccacccatgtgaccagagttcctgctatcctgccactggtaacctgcttataggt
cgtgagaagagcctctctgctatatccacctgtggtctctacaggagggagcgatactgc
attgtgtctcatctgaaggaccggaaaaaatgtttctggtgtgattctcgaccccggttt
gatggcagccctcaatactcgcacaagattgacaacattgtgtataggtttgatcgccgt
actcagcggcggtcatggtggcagagtgagaatggcgtagaggacagcagcatccagttg
aacttggaggcagagtttcattttacacatcttatcatcacattcagaacctttagacct
tctgccatgcttattgaaagatcatttgacttcgggaagacatggaaggtgtatcggtac
tttgcttatgactgcaatgatgccttcccaggagttccccagggccctccaacctccatc
aatgatgtagtttgtgagtctcgatattcagctgttgaaccgtccactgagggtgaagtg
atcttcagagtactgccaccaaatattgagatagagaatccatacagtgatgaagttcag
aacttgctcaaaattactaacctgcgagtgaacttcaccaaacttcatacactcggtgat
caacttctggataaccgaagagagataaaggaaaaatactattatgccatatatgatatg
gtggtgagaggatcatgttcctgctatggtcatgcatctcggtgtctgccgctggaaggt
gtagaagatcgaccagatatggtacatgggcgctgtgagtgcacacacaacacaaaaggt
cttaattgtgaaaactgtgaagacttttataatgaccttccttggagaccggctgttgga
caggaatcgaatgcatgtaaaagatgtaactgtaacaaccatgcatcattttgtcacttt
gatcctcaagtgtatgaagacacaggccgaatctcaggtggcgtgtgtgacgattgttct
cacaacactcagggtcgcagctgtgaagaatgtgtacctttctattatcaagatcccagc
agagatatacgtgatgctgaagtttgccaaccctgcaactgtgataaccggggctcaata
gacaatgccatatgtgattctcgcactgatgttgccagtggtctgttggctggcaggtgc
cactgtaagacttatgttgatggcctcaagtgtgaccgctgtagggctggatactggaac
ttctcagcagaaaacccagaaggatgtcagagaatcacagaagattattattcacaacca
aaatcagaatggcctcgtaaaccttgctcgtgtgatcttcttggaactgttaataacatg
ggctgcaatgtccaaacgggcgagtgttcttgtaagcgctttgtgactggacgagattgt
aaccagtgtttgcctcaacattacggcctctcagagcacccagatggttgtcagccttgt
aactgtgataagggcggctcactggacaataactgtgatgttctcaatggccagtgcaag
tgtcgcccgcacgtgtctggtcgtcgctgtgacgtccctgaagaaggttactatgtggca
acactcaactacctcacttatgaagctgaacttgctagaggatctgagctttattgtgag
gaggcgagtctgtatgacgccagacagtccagtggaagtaactgccaagttgtgatgaga
gaaccataccgtgatggccgggagaccacctggacgggcttgggtttcatgcgagtgttc
gagggttcctaccttgaatttgaggttgagaacattgaaactagtatggaatatgacctt
gtgcttcgctacgaacctcagttccgtggagactgggagaacattatggtgacagtggag
cgtcctgaacctattgatccaactggaccttgtggtaacagcagacccattgatgaccag
atgattattagtctgccagatagtcgtcggcaagtaacactgttcccacctgtgtgtttg
gagtctggcaaacgttacaaaatacgagttgacttcagacgatcaaatgctcgcacagat
tctccctcggcatccatcctcgtagactctattatgttgattcccagagctgaaaaactt
ccattctattctggctcctttgaaaatgatgatcttcgttatgagtacgagcgataccgg
tgtagtgaaagcttctatgacggccagggtgttgccacggtccctgaagtctgcagagac
aaccacttggacagtattggcttctatgtatatggacaggctttctcctgtcagtgtgat
ggaacagggagctacagcagcatctgcagttcactaggtggtcagtgtgactgcaaaccc
aatgttgttgggcgccgttgtgatcgctgtgcgccaggcactttcggttttggtcctgaa
ggttgtaaagcctgtggctgcagtcctgttggagctttagacaacttctgtgaccagcag
acaggtcagtgtaaatgccgtccaaacacgtatggtcgtcagtgtgatgagtgtcagcct
gggttctggaactttcccaactgtcagcgatgcgagtgtaatggccatgctgacacttgt
gactcctacacaggtgtctgtcatgaatgtcgagacaataccagtggaccaaactgtgct
ctgtgtattgatggcttttatggtgatccacgcttggatgtgggcattgcatgtagaagg
tgtccatgtcctggaactgtagattctggtcacagttttgctgatcgctgctccctcgac
cctcgaaccaaagatgttgtgtgtgaatgtgaagtaggttatgctggagcccgttgtgat
gtatgtgcagataactactttggtaaccctgagatctctggcggtagttgtcagtcgtgt
aattgtaacaacaacattgatatctctcgccctggtaattgtgataaacatactggggag
tgtcagcaatgtctcttcaactcctttggtttctactgtgaacgctgtcagcctggtttt
tatggcgatgctctccaccaacaatgcagagaatgtgtatgcaatattctgggttctaat
cagactattggagtatgtgaccatgagacagggcagtgtccttgtcttcctaatgtgtta
ggactggagtgtgatcactgtgcccctaaccactggaagattgcttcaggcatgggttgt
gaggcttgtgcctgtgatcctgttggttcttattccgatcagtgcaacgagcagtataga
caaggctatggtggccatagcaattcttttgatggaatatgtgaatgccgcccagggttc
ggtggccgccagtgcaatcaatgccaaaccaacttctatggcaatccccggatagaatgc
ttagcatgtaattgcaactttgaaggctcggaaactcttcagtgtgaccatgacactgga
cgatgcaagtgtcgagaaggtattggtggaaacaaatgtgatgaatgtgcacgaggtttc
actggcagggctccatactgccagccttgtggagagtgcttcgacaattgggatttaata
ctcaaagagctaaaagaacgcacagaatccctgattcatgcagctggagaaatcaagcaa
acaggagcaacaggtgcatacagtcatgagtttgaatcaatggaagagaagattgatgat
gtgagagatatattactatcagccaacatgacatctgacagtttggtgtccctggaggat
gttatcgcacaactcagtgcaaatctgtcttctgctgcggctgacctccaagggctagaa
caaggagtggacaacaccacacaacgtatctccctggctacaaatgctcttgctgacctt
cggctacaggcagaagaacttcggaatcaagctggtgatcagaaggaagaggcaactaaa
ttacaggaggccaatgttgaaggagcattgaatttgacccgacatgctggggagaggtca
cgtgctgcacaagaacgagttgaatttactcgggttattgtgtctgaatctgaacgcaac
cgccgaaggactgaaaatctcctcctccatgctggtgatcgcttcaaccgtacacaggat
gagaatgaagcaaatttggcgtcacttagtgaattattagatgatatggacgatggcatg
cctgatctcaatgagcaggtgtgtgaccggcgtggtgatccatgtgacacctactgtggg
ggcgcaggttgtggcaagtgtggtggactctcctgcaacgatggtttagtgaacattgct
gaaactgcactcaagtttgctgatgatgcagaagaaacactaaaaaagaaagaagcatca
gcagatgagctgttgagaggtgtctcgggtgctaagcgtcagtctgatattgcctttgac
ttagccaaaatggcctttagtatgacctttgaggctcgcaatatgacggactcatataaa
gctgctatctctaggctcattgaagaaatccaagaatacttcagtacaccaggagctaaa
cccaaggaaattaggataatagctgaagaggttctgggtcttgatatttccctaaaacca
gagcagataactgacttagctgaaaggattacactcaccatcgaatctcttacaaatatt
gatgccattattgatgctaccaggaatgatttagcctctgcagtagaactcaaagaacga
gctgaccaggccaagaagaaggctgaagaaacgttgaatgtagccgagcgtgtagtagaa
gccctggatgaggccggtgttgcccaagatgctgcagaagaggctgtcatgaaagctagt
aatgacatagacatcactcagacccatcttacacagattgcaagtgagactagtgatgct
caggtgaaagcaaactcttctcttaaagaggtacaacgcttagaagatcgtgtggaggag
gtgaagcttcagtacaagatcaatcaacgtcatcttgaagacacaacaaatgttgtcagt
caagcagctcttaagtcccaacgtgcagctaatgatgctagacaacttgaagataaatac
ttgactgtagaagaaagtttggtgttgaagtccaaagcagctgaggatgccagacgtaga
gctgaagatctcaagaagagggcaaataaattggcatcagaggcgttttctaaattagac
actcttaatgagatagaagaagccttccagagcaatgaacaaatacttgagaattatgaa
gaagaaattcgacgaatggaaataagcatggtggaatatcatgagtacattttaaagaag
acagaattctatgccacatgtcattctggaactcgctga
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integrated database retrieval system
