Homarus americanus (American lobster): 121868719
Help
Entry
121868719 CDS
T07477
Name
(RefSeq) DNA repair protein RAD50-like isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03440
Homologous recombination
hame03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121868719
03450 Non-homologous end-joining
121868719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hame03032
]
121868719
03400 DNA repair and recombination proteins [BR:
hame03400
]
121868719
DNA replication proteins [BR:
hame03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
121868719
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
121868719
BRCA1-C complex
121868719
NHEJ (non-homologous end-joining)
MRX complex
121868719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
SbcC_Walker_B
AAA_21
GAS
Cortex-I_coil
AAA_29
ABC_tran
Zf_2nd_IFT121
AAA_13
Motif
Other DBs
NCBI-GeneID:
121868719
NCBI-ProteinID:
XP_042225505
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MAQIDRLGIQGIRSFGPEEARTINFLKPLTLILGQNGCGKTTIIESLKYISTGEVPPGCG
RGASFVHDPKMAKESSVRGQVKLRFTDARGKVIVSTRSLVATQKPKSLECKTLDATMIWK
QPDGSDVTLSSRCAEFNASMTAALGVSKAILNNVIFCHQEDSNWPLDEGKKVKDKFDEIF
NATKYIKCLETIRKLRADMKGKIKNMKDILFELKKWKDEANRKRVELKTSEEKQTNIITE
KETLTTEMKPIVQRLKHISTIEADIGRIREELSGKQYQLKSLRKTQEELRATLTEQLKCS
DEELYRMIQDFQRDLALKETEQRRVESSLSGLEREVQKNQMDVARTVRQQGELEAAHNRH
KNYVQRRDAQMIGLVEEFTFSEFLGVQNFKDEQADSVLNQLLKVIEDERASIMVKKQEFE
KEEVRTQREIDGLRSKEAALDHDIKNKGKQLEETAKQLRQVKHTLKRNESELSAANLDDI
KAELTQVEEMISAEESKLDVKKVVEDIDGGKKTRREIEHKLDDIKRVVAKMNRQAEARSQ
YDIHVKEKKELENKIEYLKRKHTDELEHLLGEVPDENIKNKVDACTTNLKDHIAGLRRDI
ERINRRKTQLDTSIKGHKQQIERKENEIKDLETKIDNICQGKDLDNALEKSKKVKEELSN
ERGDLSSSITVLNRFTERLKQRDCCPLCHRDFSTKDEVNQLIEELDEKVSSVPGKLKMVQ
EKLIKEDRQHDQMIQLKPQRDQANRVRAELVKIRSQMDAEVSELEKVGVELESKTELMEI
TQGDEETARMIQPDVFTIEQHLRKVKYLKDQIDDLQGALGSADGGMSMEEAMGCQSELEE
ELRKCQSKVEGLQEHLQEHKERLQSLKDRKLRLSTKELNLRTKLQETEKLKEDISRLDQD
RTRLEEEREQAQVEVAPYKYQIKSKTEEKTKIIKEKESWIEKGNLKVNAMWEKHRSVNEL
QKNIVFYVRGGEEERLKERRQQVASLQEKAAALELDKKSLEEQNRKIQKEISNQKERKRS
LDDEKKIRDKEAEAKLLEQNIKGLEDSIQGLDYESIVSEKYHLNEDWHKMQTKRAALEGR
LEEIAKNIRLLENDLGRKEIRDAEKNYKVKYVEMKCMDLAADDLNKYYKALDTAIMRFHS
DKMNSINGIIRELWRTTYKGNDIDYIEIKTTDGVESQGADKRRIYNYRVVMIKNEIEMDM
RGRCSAGQKVLASLIIRLALAETFSSNCGILALDEPTTNLDRENVVALSLALLNIVERLH
IRLRNFQLIIITHDTDFLERMTHNQYLDNYYLVSRNERGLSEISSHNPNTL
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattgacaggttgggtattcaaggcatacgaagtttcggaccggaagaagca
cgcacaattaatttcttgaagccactcactcttattcttggtcagaatggttgtggaaag
acaactatcattgaatcactgaaatatatctctacgggagaggttcctccaggatgtggt
cggggagcttcttttgttcacgatccaaagatggctaaggagtcgtctgtacgtggtcag
gttaagctacgttttacagatgctcgaggaaaagtaattgtatcaactcggtccttagtg
gccacacagaagccaaagtcccttgagtgtaaaaccctagatgccaccatgatatggaag
cagcctgatggaagtgatgtcactttatcaagtcgatgtgctgaatttaacgcatctatg
acagcagctttaggtgtgtctaaagccatactgaacaatgtaatattctgccatcaagag
gattcaaattggccactagatgagggcaagaaggtgaaagataagtttgatgagatattt
aatgccacaaaatacatcaagtgtttagagactatacgcaagcttcgtgcagatatgaaa
ggcaagataaagaatatgaaagatatcctatttgagcttaagaaatggaaagatgaggca
aatcgaaagcgtgttgaactaaaaacttcagaagaaaaacaaacaaatatcatcaccgag
aaagagaccttgaccacagagatgaaacccattgtacagcgtctcaaacacatttctact
attgaagcagacataggacgtataagagaagaactcagtggtaaacaatatcagctgaaa
tctttaaggaaaactcaagaagagcttagagcaaccttgacagaacagctgaagtgttca
gatgaggagctgtaccgcatgatccaggactttcaacgagatctggctcttaaggaaaca
gagcaaagaagggtggagtctagcttgagtggcctggagagagaggtgcagaaaaatcag
atggatgttgcaaggactgtgaggcagcaaggagagttggaagctgctcataacagacac
aagaattatgttcagagaagggatgcccagatgattggtttagttgaagaatttactttc
tcagagttcctcggagttcagaatttcaaggatgaacaagcagactctgtgttgaaccag
ctgttgaaggttattgaggatgagagggcaagtattatggttaagaaacaggaatttgaa
aaagaagaagtcagaacccagagagagattgatggtctacgatcaaaagaagctgcattg
gaccatgatattaaaaacaaagggaagcagttggaagaaacagccaagcaactcagacaa
gtgaagcacacactaaagcgtaatgaaagtgaactgtctgctgctaatttggatgacatc
aaagctgagttgacacaggttgaggaaatgatctcagctgaagaaagcaagcttgatgtt
aagaaggttgtagaggatattgatggtggaaagaaaacaagacgtgaaatagaacataaa
cttgatgacatcaaacgtgtcgtggcaaagatgaaccgtcaggctgaagctcgttctcag
tatgacatccatgtgaaggagaaaaaagaactagaaaataaaatagaatatttaaaacgc
aaacatactgatgaattggagcaccttcttggagaggttcctgatgaaaacataaaaaat
aaagttgatgcatgcacaactaacttgaaggaccacatagcaggcctgcggagagatatt
gagagaataaacaggaggaagacacagctggatacaagcatcaagggtcataagcagcag
atagaaagaaaagaaaatgaaattaaagatttggaaaccaaaattgacaacatctgtcaa
ggaaaagacttggataatgccttggagaaatcaaagaaagtaaaagaggaattgtctaat
gaaagaggggacttatcaagctccattactgtgctgaatcgcttcactgagaggctaaag
cagcgagactgttgccctctttgtcacagagatttttcaactaaggatgaagttaatcaa
cttattgaggagttggatgaaaaggtgagcagtgttccagggaaattgaagatggtacag
gagaaactaatcaaagaagacaggcaacatgatcaaatgatacaactcaagcctcagcga
gaccaagccaaccgtgttcgtgccgagttggtgaaaattcggagtcaaatggacgctgaa
gttagtgaattggaaaaggttggtgtggaattagaatctaaaacagaacttatggagatt
actcaaggtgatgaagagactgcaagaatgatccagcctgatgtttttaccattgaacaa
cacttgaggaaagtcaaatacctaaaggatcaaattgatgaccttcagggagctttagga
agcgcagatggtggaatgagcatggaagaggccatgggctgccaaagtgagttggaagag
gaactgcgcaagtgtcagtcaaaggtagagggattacaggagcatctccaagaacacaag
gaacgactacagagcctaaaagatcgtaaattgagactatctacgaaagaactaaatctg
aggactaaactgcaagaaacagagaaattaaaagaggacatatcaaggttagatcaggat
cgcacgcgtcttgaagaagagcgggaacaagcgcaggtagaggttgccccatataagtat
cagattaagagtaaaacagaagagaaaaccaaaatcattaaagaaaaggaatcctggatt
gagaaaggcaacctgaaggtaaatgcaatgtgggagaaacatagatctgtcaatgaacta
caaaagaatatagtgttctatgtgagaggaggagaagaagaacgcttgaaggaaagacgt
caacaagttgcttctcttcaagaaaaagcagcagctttagaattagacaagaagtccctt
gaagaacaaaatcgaaagattcagaaagaaatatctaatcagaaggaaagaaaacgaagt
cttgatgatgagaaaaaaatccgtgacaaagaagctgaagcaaagttactagagcaaaat
atcaagggtcttgaagacagtatccaaggtttggattatgaaagcatcgtcagtgaaaag
tatcatctgaatgaagattggcataagatgcaaaccaaaagagcagcactagaagggcgc
ctggaggaaattgcaaaaaatattagacttttagaaaatgaccttggacgaaaagagatc
cgagatgcagagaaaaattacaaggtgaaatatgtggaaatgaagtgcatggacttggca
gcagatgatctaaataagtattacaaggctctagacactgctataatgcgcttccactct
gataagatgaactcaatcaatggaatcataagggaactttggcgtactacttacaaaggc
aatgacatagattatattgaaataaaaacaactgatggagtagaatcccaaggtgcagac
aagcgaagaatatataactatcgagttgtgatgataaagaatgaaatagaaatggacatg
agagggaggtgctctgctggtcagaaggtcttagcatctcttattatcagattggctctt
gcggaaaccttcagttctaactgtggcattcttgctctggatgaaccaactaccaacctg
gatcgtgagaacgttgttgctctatcacttgccttgctgaacattgttgaaagacttcat
attcgtctccgaaacttccagctgattatcatcacgcacgacactgatttcttagagaga
atgactcataatcaatacttggataactattacttggtatctagaaatgagaggggcttg
tcagaaatctcttcacataaccccaacacactctga
DBGET
integrated database retrieval system
