Homarus americanus (American lobster): 121869593
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Entry
121869593 CDS
T07477
Name
(RefSeq) focadhesin-like
KO
K27498
focadhesin
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121869593
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121869593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3730
Focadhesin
DsrD
Motif
Other DBs
NCBI-GeneID:
121869593
NCBI-ProteinID:
XP_042226964
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MEEYEQKINSGNVFLQSQAITKLHTKAVETHKDATSMYESEEVKCLWQTANKGDVTEATL
AIETLVSLVKAGLLPVPATLQNFLADVTCAKSPSAVVQGITEIVLLSQVEVDGQLQTPFT
GPPTGPVHPFVTLITKRSDLIPTVLEEVANMLRHPDPNVRASSICHVRPLLLHTFCLTEM
TLGIARPLLALIVSSHITHAGMDLVPLLCRIVTLIKDSTKDHVERKVMVLTALAEIAVGE
KLTRLQSALLPCLVMAVPPAMKQGLGTRTLERYINVLASRLGRGCDVTVCALAEALPQTS
GQLQVNLLKLGATLLSYKDGNPLVGARLLPSLLQVLSAPCTSVPGLTTAAAALVSLVQAT
PAQASSNTQLAGNEHWETLSCTFSSLVSYLPALEFSDRLVRDPQLASDWLTKLASSTNQI
SSFYHTIVTSVFLYQGSTTQSVQQATKVLEREVMKKKVLSLEVFPIVLYRLGRETDPTTR
LTILYTLPSLAVNKLCVALVLKTLLAFWSSGSLRPLVLRLMYDLWTVEPRTYSYLSQLIH
DKSINTNEIQIARTYVVSSVCRSKPSQHGEELLPLLSGFLNDCREQDGTAQTLIALDGIY
DLCTNQIIDLRTTWRVIAPKLVRDKRPGVTEKLCSLLGLVPVLHVTSTEYEKFTSDALTI
LWNWVAANRSLSIVKAAYKSLEKFQYDSYTLKMLPQYAREGHHLPASMAATPFEAARKPE
DVLKYVPGVGWVKLIKGCPESHLEFVESFVNSLVSREVAALPKSIYLTAVQEAKRRGIKG
SGGGQPESQSYNFFKDMSTLRALVNFLSEFPKLMERCEDAQVKQRLLRSSVLMLEALGQS
LPRPYPALDWSFLEKVLTIAQATCNYDWITRIRHSMFQITARQCNKSGSAVAIISKWLVP
APSTGLTREDEIVLFKLLDHLGRGLPPTVLQPFLAYVFNQHLSDTMHMKALLEALKPNLT
ADFIFDTNRNALSNAVENLNEHIDPTNEILYKAYKACVADLPQKHIERLTSPSLWWEVTD
ERLYRAAVLRCHVAEKDPEELALPWLNDLVDSAASLPGDRSHLLRVMSDTLVVRCRVKES
TTWFLQLLGRLRDNLKKKPGDNLVAAHEQQQKVTFYLDLVVMGLVVWSDLWATNHMEVLA
ESPALRDRLLLPSIVTLSGQPQWKQTLNQLLNWLASCHSLMGDNVSSRYHLGSPTLLLAT
LNPSLTQVMWNKVIALLI
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatatgagcagaagataaactcgggcaatgtcttcctacaaagtcaggcaatt
acaaagctgcatacgaaagcggtggaaactcacaaagatgcaacgtctatgtatgagtca
gaagaggtgaagtgcctgtggcagacagccaacaaaggggatgtcacagaggccaccttg
gctatcgagacattggtgtcgctggtgaaggctggactgctgcctgtcccggccaccttg
caaaacttcctggcagatgttacttgtgctaagtctccaagtgcagttgtacaaggtata
acagagattgtgctgttgtcacaagtggaggttgatggacagctacaaacccctttcacg
ggtcctcctaccgggccagtccatccctttgtgaccttaatcaccaagcgttcagatctg
attcctactgtgctggaggaagtggctaacatgttgaggcatccagacccaaatgtgagg
gcttcaagtatttgtcatgtgcgcccactactgctacacactttctgcctcacggagatg
actctgggcatcgcaagaccactgcttgcactcattgtcagctcacacatcacccacgct
gggatggatttagtccctcttctgtgtcgaattgttactcttattaaggacagtaccaaa
gaccatgtggagaggaaggtgatggtattgacggccctggcagagatagcagtaggggaa
aagttgaccagactacagtctgcacttcttccttgcctagtgatggctgttcccccagcc
atgaaacagggattagggacgaggacattggaacgctatatcaatgttttggcctctcgc
cttggacgcggttgtgacgtaaccgtgtgtgctctcgctgaggctctcccacagacatct
ggtcaactgcaagtcaatttgctcaagttgggtgcaacgctgctgtcttataaggatggg
aaccctctcgtaggtgcaaggcttctaccgtccctcctgcaggtgttgtcagccccgtgc
acctcagtccctggcctcaccaccgctgccgctgctttggtctctcttgtacaagctaca
cctgctcaagcatcttctaatacccaactggcaggcaatgaacactgggaaacgctctct
tgtacattctcaagtctggtctcttaccttcctgccctcgagttttctgaccgcctagtg
cgagacccacagttagcctccgattggttgacaaagctagcatcatcgacaaatcagatc
tcgagtttttaccacaccattgtcacgtccgtgttcctgtaccaaggctcgacgactcag
tctgtccagcaggcaacaaaggtcctggagcgtgaagtgatgaagaagaaggtgctgtct
ctcgaggtgttccccatagtgttgtaccgcctgggccgtgagaccgacccaacgacgcgc
ctcactatcctctacactctcccttctctcgctgttaataagctgtgtgtagctttggtg
ctgaagactctcctcgccttctggtcgtctgggtcactacggccactcgtgctgcgtctc
atgtatgacctgtggacggtggagccgaggacctattcctacctctcccagctcatccac
gacaagtccataaatactaacgagattcagattgcccgtacttatgtggtgtccagcgtg
tgtagatcaaagccttctcaacacggcgaggaacttttgcctctcctctctggtttcttg
aatgattgtcgggaacaagacggaacagcacagactctcatagccctcgatggtatttat
gatttatgtaccaaccagattatagatctccgcacaacctggcgtgttattgcccccaag
ttggtccgagataagagacccggggtgacggagaagctgtgttcgctacttggattggtt
ccggtgctccacgtgaccagtaccgagtatgagaagttcacctcagacgccctcaccatt
ctctggaactgggttgccgcaaaccggtctctttcaatagtaaaagctgcatataagtca
ttagaaaaattccagtatgatagttacaccctcaagatgcttccccagtatgcaagggaa
ggtcatcatttaccagctagcatggcagccacaccttttgaggctgcccgtaagcctgag
gacgtgttgaagtacgtgcctggtgtaggatgggtcaagttaataaaaggctgcccggag
tctcatctggaattcgttgagagcttcgtcaactcacttgtttcacgagaagttgctgca
cttcccaaaagtatatacctaacagctgttcaggaagccaaacgcagaggaatcaaaggt
agtggtggtggtcaacctgaatcacaatcctacaattttttcaaagatatgtcaactctg
agggctttggtaaacttcctttcggaatttcccaaactgatggagcgttgtgaagatgcc
caggtaaagcagaggttactcaggagctcagtgttgatgcttgaagcacttggtcagtct
ttacctcgaccatatcctgccttggattggtcttttctggagaaggtactgacgatagct
caggcaacctgcaattatgattggattacaagaataagacacagtatgttccaaattaca
gctcgtcagtgtaataagtctggctcagctgttgccataataagcaaatggctggtgcct
gcaccgtctactggtttaacccgagaagatgaaattgtactgttcaagctgctggatcat
cttggtcgtgggttgccacctacagtcttgcagccattcttggcttatgtttttaatcaa
catttatcagacacaatgcacatgaaggcactccttgaggctttaaagcctaaccttact
gctgactttatctttgataccaacagaaatgctctgagtaatgcagtagagaatctgaat
gaacacatagacccaacaaatgaaattttgtacaaggcatacaaggcgtgcgtggccgac
cttcctcagaagcacattgagcgtctcacctcaccgtctctctggtgggaggtcaccgat
gagcgactgtaccgagctgctgtgttgcggtgtcatgtggcagaaaaagacccagaggag
ttggctttgccttggttaaatgatctggtggactctgctgcatccctacccggcgaccgt
tctcatctgctgcgggtgatgtcggatacgttggtcgtccggtgtcgagtgaaggagagc
accacctggttcctgcaactcctcggtagacttagagataatctgaagaagaagcccgga
gataatctagtggcagcccacgaacagcaacaaaaagtaaccttctacttggatttggta
gtgatgggacttgtcgtctggtcagatctgtgggcgaccaatcacatggaagtcctggcc
gagtctcctgcactccgagaccgtctcctactgccttccatagtcactctgtccggtcag
cctcagtggaagcaaaccctcaatcaactacttaactggcttgcatcgtgccactctctc
atgggtgataacgtctcttcccgttaccatctaggttcacccaccctcctcctggccacc
ctcaatcctagcctcactcaggttatgtggaacaaggtcattgctttacttatttaa
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integrated database retrieval system