KEGG   Homarus americanus (American lobster): 121870363
Entry
121870363         CDS       T07477                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
hame  Homarus americanus (American lobster)
Pathway
hame03020  RNA polymerase
hame03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hame00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121870363
  09124 Replication and repair
   03420 Nucleotide excision repair
    121870363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hame03021]
    121870363
   03400 DNA repair and recombination proteins [BR:hame03400]
    121870363
Transcription machinery [BR:hame03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     121870363
DNA repair and recombination proteins [BR:hame03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121870363
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Lar_restr_allev DZR SR1P
Other DBs
NCBI-GeneID: 121870363
NCBI-ProteinID: XP_042228090
LinkDB
Position
Unknown
AA seq 166 aa
MYTLHPQLFCGTVLTLLVGSHVSLARILFSIQRISFVIMSILAKGGTEGPGFIGIRFCQE
CNNMLYPREDKENKILLYACRNCDYKMPTENNCIYVNKLMHEIDELRHINPEVVQDPTLP
RTDDHPCPRCNSRDAVFFQAQTRRAEDEMRLYYVCCNTECTHRWTE
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtacacactccacccccagctgttctgtggcactgtgttaacgttgctggttggatct
cacgtttctttggctcgaattttattttctatacaaaggatatcttttgtaatcatgagt
atcctggccaaaggaggtactgaggggcctggcttcattggaatccgattctgtcaagaa
tgcaacaacatgttatatccccgagaagacaaggagaacaagatcttgctgtatgcctgt
cgaaattgtgactataaaatgccaaccgaaaacaattgtatttatgtcaacaaacttatg
catgaaattgatgagctacgacacatcaacccagaagttgtacaggaccccacattgcct
cgcacggatgaccatccttgccctcgctgtaactcacgtgatgccgtgttctttcaagca
cagacaaggagagctgaagatgaaatgagactgtattatgtctgctgcaatacagaatgt
acccaccgctggactgagtga

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