Homarus americanus (American lobster): 121870667
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Entry
121870667 CDS
T07477
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hame03000
]
121870667
Transcription factors [BR:
hame03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121870667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Vir1p
Chorion_1
Motif
Other DBs
NCBI-GeneID:
121870667
NCBI-ProteinID:
XP_042228562
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MLTLDPPDLKGGSLHSPHLPPHTSHSHSVPHAHHNSHSHTYSLSHHSSLTSLNSSLSSSL
STPSLASVGSMSAHSPPQTHVPTPTNNNNTSTNNNNNGSNNSTSNSSSNSKSSASSSNAA
AERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRL
RAVHMKEHPDYKYSTRGCRVSRTTLERLHFPSCKVRPRRKTKTLMKKDKYPLASGLLPTD
PTRPPVQQVTRDMRDMYNMTNGYMPNGDYGDYGEWSNKRDRCLYIRLPNYPGLDPKQTYQ
NCQPRTNFQCSYFSGYGYDSAAYGGQSYPYMTGQMYGGYDMTRGYSPTSSTPSYMNGSYS
PAMYASAPSPYSMSQMASMASVGSVGSVGSSASHSPTPIKSETPTLPVSSPGATMPPSAT
HTTAGEYQTGVMKREYGTGGPGQQDLSQMISMYLPGSQERHEQQKAVAAAAYMSHAHYHA
HGAASPDQMPPAPMPLAHM
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccctagacccaccagacctaaagggcggcagcttacactctccacatctccct
ccccacacttcccactcccattccgtccctcatgcccaccacaactcccattcccacaca
tactccctttcccaccactcctccctcacctcgctcaactcctcgcttagctcgtccctc
tccaccccctccctggcctccgtgggcagcatgagcgcccactccccgccccagacacac
gtccctacaccaaccaacaacaacaacaccagcacaaacaataacaacaacggctccaac
aacagcacgagcaacagtagcagcaacagcaagagtagcgcctcctcctccaacgcggct
gccgagcgcgtcaagcggcccatgaacgccttcatggtgtggtccagaggccaaagacgc
aagatggctcaggagaaccccaagatgcacaactccgagatctccaaacgtctcggcgcc
gagtggaagcttctctccgagacggaaaagaggccgttcatcgacgaggcgaagagactg
cgagcggtgcacatgaaggaacatccagactacaagtacagtacacgaggatgcagggtg
tcccgtactacactcgagcgccttcacttcccgagctgtaaagttagaccacggcggaag
accaagaccctcatgaagaaggataagtacccactggcatcaggtctcctgcctacagat
cctacccgaccaccagtacagcaggtgacccgggacatgcgagatatgtacaatatgacc
aacgggtacatgccaaacggggactatggcgactacggtgagtggagcaacaagagagat
cgctgtctttatattcgtctgcccaactaccccgggctcgaccctaaacaaacttaccaa
aattgtcaaccaagaaccaattttcaatgttcctatttctcagggtatggttatgacagc
gcagcctacggtggacagagctacccctacatgacaggccagatgtacggcgggtatgac
atgacaaggggttattcgcccacctccagcaccccctcctacatgaacggctcctacagt
ccagccatgtatgcctcggctccttccccttactccatgagccagatggcgtccatggcc
tcagtgggttcagtgggttcggtgggctcgtcagcgtcccactcacccactccgatcaag
tctgagacgcccactttgcccgtgtcctcgccaggcgctaccatgccgccctctgccacc
cacacgacagcaggtgaatatcaaacaggtgtgatgaagcgggaatatggcacaggaggt
ccgggccaacaagacctgtcccagatgatctccatgtacctgccggggtcccaggaacgc
cacgagcagcagaaggccgtcgccgccgctgcctacatgtctcacgcccactaccacgcc
catggcgcagcctcgcccgaccagatgccgcccgcgcccatgcctctcgcccatatgtaa
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