Homarus americanus (American lobster): 121870678
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Entry
121870678 CDS
T07477
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04519
Cadherin signaling
hame04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121870678
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121870678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hame03000
]
121870678
Transcription factors [BR:
hame03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
121870678
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Ank_2
Ank
Ank_3
Ank_5
Ank_4
TFIIA
Motif
Other DBs
NCBI-GeneID:
121870678
NCBI-ProteinID:
XP_042228543
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MSKSRTVLKSRLSSGGMNSPYRGESASPYSSDHSVGVPSPPTVVAAFNRPYDAVHHDGPY
IHLLEQPQPKFRFRYKSEMVGTHGQLKADRADKNRAVFPTVKLAKWSLGPAVIRLTLYTA
EDNVNQRKRHVHELSGKNCDRETGICEVVVDDKCDYTAVFQNLGIIHIAKRDTREIIFQR
KKDDLLSHARVRKPQCGYKEIEMSITPTDHKRMDEEADEEAKTMDLNKVVLRFQAFQYDK
SIERYRAITLPVDSDVVFNLKNATTGELKIVRMSACTAPCTGGTEIWLLVEKVRRNNIQV
KFFELDQNDREVWAAYGEFTDSDVHHQYAIVFKTPRYRFTNLNTSVRVKVQLERPTDRDT
SDPLDFTYIPDSLKRSRVNLENTLEEGKRHLNDPPAKRFNFNPYTNEAIDLSNNTRNGRG
QEDSMQTPDILEFIMRGSDFNDANVLNPFSLEIPNQSPQHAVPSPGNPGDSSNQGLYSPI
HPGSTGTPTTEYVTICNGVLQVPSPGQQLSPSSPQYSQTSPGELSGASPPYQGPSGGGMT
PQFSQVQSPQYTQVPSPVMMVPSPSYQESTTQMVSQQYIQQQLQQQQQQQQQQQQQQQQQ
QLQQLQLQQQHQQTQQLHKQPTMGSQQVIQSSGETWESIQQGVSLQPQQNMPAPDFELPS
CFSVGTIGQDATLMDMLDIAGGQLDFGTGFMGNTDIKLDYGGKKDSKKKQRDQPINTGQD
IADLSKMMSEVRVEDTIERNRRNPPTQAGGSGQRNAPNVDVAFRVAVSAAECLQAYAATG
DISLLLATHRYLLAVQNNQGDTALHTAVSNKNMEAFNKILKASEKINPRDLLNAQNFANE
TALLQAVRGNEVTMVKRLVAVLGCDVSIADAQGNNPIHCAAELHDHRCLEALLTRPINGS
RSSLTQAINAYNYHGATPLHLAVIGGNLECVRLLINAGAQVHHCERKRGAKPLHLAAMFH
RHEIASFLLSNTSVTVEAGMFDGNTALHLAAQARDQVMCRILLRAHADPQAKNVLSRRKK
SSESEEEEEETETGRKEEDDEEEESEEESEGYTPIDYAGDDEKILAILRGEEILEENAGA
EAQVLVEKKEAPAALDSGIDISVTDIQGPDSTYEEEKCVSELSERVRGRLASHLSGDTWR
HLAQLLDLDYMVPCWAKESSPAELLLHPDNMKVSVGNTCPREPDYNHRCKCVARNCEVYS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcgaggactgtattgaagtcccgtctgtcaagtggtgggatgaattcccca
tacagaggagagtcagcctctccatactcttctgaccattccgttggagttccttcgccc
ccaacggttgttgctgccttcaaccgcccttatgatgctgttcatcatgatgggccatac
atacacctactggaacagccgcagccgaaattccgcttccgttacaagagtgaaatggtc
ggcacgcacggacagttgaaggctgaccgggcagacaagaacagggcggtgttccccaca
gttaagctagctaagtggagtcttgggccggctgttatccgtcttacactctacacggct
gaagacaatgtcaatcaacgtaaacgccacgtacatgagctctcagggaagaattgtgac
agagaaactggaatttgtgaagtagtggttgatgacaaatgtgactacactgcagttttt
cagaatcttgggatcatacacattgccaagcgagacacaagagaaataatttttcaacgc
aagaaggacgatttactaagtcacgcacgtgttcgtaaacctcaatgtggctacaaggag
atagaaatgagcatcacacccacggatcacaagaggatggatgaagaggctgacgaggag
gccaagaccatggacctgaataaagtggttttgagattccaagcattccagtacgacaag
agtattgagaggtaccgagccatcacccttcctgtagactcagatgtagtctttaacctc
aaaaatgccaccacaggagaactcaagattgtgcgaatgtcagcctgcacggccccttgt
accggcggaactgaaatctggttattggttgaaaaagtcagaagaaacaatatacaagtc
aagttctttgagttggatcagaatgaccgggaggtttgggcggcgtatggagagttcacg
gattctgacgtccaccaccagtatgccattgtcttcaaaactcctcgttatcgatttaca
aacttaaatacttcagtccgggtcaaagtacaactcgagcgtcccaccgacagagacacg
agcgaccctcttgacttcacctatatcccagacagtctgaagcgctcgagggtgaacctg
gagaacacactggaggaggggaagaggcaccttaatgatcctccagccaagagattcaac
ttcaacccatacaccaatgaagccatagatctgagtaacaatacacgaaatgggcgaggg
caagaggattccatgcagacccctgatatactggaatttatcatgagaggttcagatttt
aacgacgccaatgtgttgaatccattctccctggaaattccaaatcagtctccacaacat
gcggtgccgtctcctggaaatcctggggattctagtaaccaggggctgtattcccccatc
catccagggtcaacagggactcccaccacagaatatgtcactatttgtaatggtgtgctg
caggtaccatcacccggccagcagttatcaccaagttccccgcagtatagccagacgtct
ccaggtgaactgtctggagcgtctcccccatatcaaggaccaagtggaggaggcatgact
ccacagttcagccaggttcagtcaccacaatatacccaagttccttcaccagtgatgatg
gtaccttctccctcctatcaagagagtactacacagatggtgtcccagcagtatatacag
caacaacttcagcaacaacagcagcagcaacaacagcagcagcaacaacaacagcagcag
caactacaacaattacaattacaacagcaacatcagcaaacacagcagcttcataaacaa
ccaacaatgggatcacagcaagtaatacagagtagtggggagacgtgggagagcatacaa
cagggggtgtctctacagcctcaacaaaatatgccagctccggactttgaattgccaagc
tgctttagtgtgggtactattggtcaagacgcaaccctgatggacatgcttgacatcgca
ggaggacagcttgactttggtacaggtttcatgggtaacacggacatcaagcttgactac
ggaggcaagaaggattccaagaagaagcagcgtgaccagccaatcaacacaggccaggac
atagctgacctcagtaagatgatgtctgaagtacgtgttgaggacaccatagaacgtaat
aggaggaaccctcccacacaagctggaggttctggccagcgaaatgcaccaaatgtagat
gtggcctttagggtagccgtcagtgctgcagagtgtttacaagcatacgccgctactggg
gacatttcattgctcctggccactcaccggtatcttctggctgtgcagaacaatcaaggc
gacactgctctacatactgcagtcagcaataagaatatggaagcctttaacaagatcctg
aaggccagtgagaagattaacccacgtgacctgttaaatgctcaaaactttgcaaatgaa
actgccttgctgcaagctgtccgtggcaatgaggtgacaatggtgaaaaggctagtagct
gttttgggttgtgatgtgagcattgctgatgcccaagggaataatcccatccattgtgct
gcggagctacacgaccaccgttgccttgaagcgcttttgacaagaccgatcaatggttct
cgttcatcgctgactcaggctattaatgcttataactaccatggtgcaactccactacac
cttgctgttattggcgggaacctggagtgtgtccggttgctaataaatgcaggggctcag
gtacaccactgtgagaggaagagaggtgctaaacctctacacctggcagcaatgttccac
cgccacgaaattgcttcctttctcttgagcaatacgagtgtgacggttgaagcaggtatg
tttgatggcaataccgctctgcacttagcagctcaagcgagagaccaggtgatgtgcaga
atcctcctcagggcccatgctgatccacaggccaaaaatgtattgagccgaaggaaaaaa
tcatcagaatcagaagaggaggaggaagagacagaaacaggcagaaaagaggaagatgat
gaagaagaagaatcagaagaagagtcggagggatacacaccgattgactatgctggagat
gatgaaaagatcttggctattcttcgcggggaagagatcctagaggaaaacgcaggtgct
gaagctcaagtgttggttgagaagaaagaagctcctgctgcccttgactccggtattgat
atctctgttacagatatccaaggtccagactccacttatgaggaagagaaatgtgtgagt
gagctcagtgagcgcgtacgtggtcgtctggccagccatctcagtggagacacgtggcgc
cacctagctcagctcttggatttagactacatggttccctgctgggccaaggaatcttca
cctgctgaacttcttctacatcctgataacatgaaggttagcgtcggcaatacctgcccg
cgggagcccgattataatcatcgctgtaaatgcgtggccaggaattgtgaagtatactca
tga
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integrated database retrieval system
