Homarus americanus (American lobster): 121871107
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Entry
121871107 CDS
T07477
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hame03009
]
121871107
Ribosome biogenesis [BR:
hame03009
]
Eukaryotic type
90S particles
Other 90S particles
121871107
Pre-60S particles
Other pre-60S particles
121871107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_ACSF4
Beta-prop_TEP1_C
TAF1C_beta-prop
Beta-prop_LRRK2
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WD_LRWD1
MIOS_WD40
NBCH_WD40
AAA_21
Motif
Other DBs
NCBI-GeneID:
121871107
NCBI-ProteinID:
XP_042229193
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MEDGEGKERVSFITCAAWVPRGAAKANPEKVEISKEELARIIQETKGKVEELEEVEEDES
EDIEEEAAEEDGTVKGKKLVESKEASATEEGKEKSVKKKKKKGKEVKEEEEEETGDFESR
YKFTAYEDENDDKMNQLLQIGLLTVHSDNDSDPFITIKDKDDHDSEDGDDEILPTDNLIA
VGHVENDAAILEVYVYNGEGSSFYVHHDILLPAVPLCMEWLNYDPGDEQLKPANMMAIGS
MSPVIEVWDLDLVDCLEPAYTLGKKGKKKKKIAGAGHKEPVLSLAWNRHAEHILASGSVD
ETVILWDLQQGTVAQQLTSFEEKVQSISWHHNEAHTLLTGACDGKARIFDCRSSDTCKTW
KLDGEVECVIWETVTDKQYSCVVSTDQGTLFGIDARQEKPLWTLNAHNKACTGIRMSPQC
PGCLVTVSYDGSVKLWDIADGKPSFIEEHCPTLGHLQCLASCPDTPFVFCMGGDNKENNF
KVWDIRESVNARSRFCPRVGLPVDDDDDDDVKMEAEESVEDSSKIQVINQALPAASASSP
VVAACQHTKTNSKLKFGKKKGGHLEKRKKKW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggagaagggaaagaacgtgttagttttattacttgtgctgcctgggtacca
aggggagctgctaaggcaaatccagagaaggttgaaatttctaaggaggaactggcacgt
attattcaagaaacaaagggaaaggttgaagagttggaagaagtcgaggaagatgaatct
gaagatatagaagaggaggcagctgaagaggatggtacagtcaaaggaaagaaactggtg
gagagtaaggaagcatcagccactgaggaagggaaagaaaagtctgtaaaaaaaaaaaag
aagaagggaaaagaagtgaaggaagaggaggaagaggaaactggagactttgaatctcgt
tataagtttacagcttatgaagacgaaaacgatgataaaatgaaccagttgcttcagatt
ggtctgctgactgtccattcagataatgacagtgatcccttcatcaccatcaaagacaaa
gatgatcatgacagtgaagatggggatgatgagattttacctacagacaacctcattgct
gttggacatgttgaaaatgatgctgccatcctagaagtttatgtttataatggagaggga
agcagcttttatgttcaccatgacattctgcttcctgctgttcctctttgtatggagtgg
ctcaattatgacccaggagatgaacagcttaaaccagctaacatgatggctattgggagc
atgtcaccggtaatagaggtttgggacttggatctggtagactgcctggagccagcctac
acccttggtaagaagggcaagaagaaaaagaagattgctggagctggacacaaggagcca
gtccttagccttgcatggaacagacatgccgagcatatattagccagtgggtcagtcgat
gagacagtcatattatgggaccttcagcagggcacagttgcccagcaattaacatctttt
gaagagaaggttcaatccatcagctggcaccacaatgaagctcacactcttctaactggc
gcttgtgacggaaaagcaagaatatttgattgccgcagtagtgacacctgcaaaacctgg
aagcttgatggggaggttgagtgtgtaatttgggaaacagttactgataagcaatacagc
tgtgtggtcagcacagaccaagggactttgtttggcattgatgcacgacaagaaaagcca
ttatggactctgaatgcacacaataaagcttgcacaggtatacgaatgagtcctcagtgc
cccggttgtttggtcactgtatcatatgatggaagtgttaaactatgggacattgccgat
ggaaaaccgagttttattgaagaacattgcccaacacttggacatttacagtgccttgca
tcttgcccagacactccttttgtgttctgtatgggaggagacaacaaggagaataatttc
aaggtttgggatatccgtgaatctgtcaatgcacgttcaagattctgcccgcgtgtggga
ttgccagtggatgatgatgatgatgatgatgttaaaatggaagctgaagaatcagtagaa
gactctagtaaaatacaagtaattaatcaagctttaccagcagccagtgcatcttctcca
gtcgtagctgcctgtcaacacacaaaaacaaattcaaaacttaaatttggaaagaagaaa
ggtggacatttagaaaaaaggaagaagaaatggtag
DBGET
integrated database retrieval system
