Homarus americanus (American lobster): 121871243
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Entry
121871243 CDS
T07477
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121871243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hame03041
]
121871243
Spliceosome [BR:
hame03041
]
Complex C
Other components
Step II factors
121871243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
121871243
NCBI-ProteinID:
XP_042229385
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MASLLSLRDYGSDSDGELGDVEEYVQHLKPIESGNTISQDLQIVVSPEVTSTKELDDRLH
IDPLEKELKYNPKYEELFAPTLGPQKPESKYQEVDRNTLAGHVEPAHFNEFEFESQRRTF
TTFGYAIDPSISGKPEDGRRYVGDVSTASETSGFTIFETKHKAEQPTRRKRDKNDDAADI
DGFKGPWAKYQNEQTVMKPSEEEQHALDEILAKRQKRGKQTDDKPIDEKSLLHIKDAYDY
QGRSFLHIPQDVGVNLKSPEPPEKCFMPKKLIHTWKGHTKGVSAIRWFPGSGHLLLSCAM
DTKIKIWEVYNNRRCIRTYMGHKQAVRDACFDNEGKQFLSAGYDRFIKLWDTETGDCISH
FTSRKIPYCVKFHPEEEKQNLFVAGTSDKKIVCWDIRTKEIVQEYDRHLGAVNTITFIDE
NRRFVSTSDDKSLRVWEWDIPVDFKYIADPTMHSMPAVTLSPNKKWLACQSMDNKIVIFS
ALDRFKMNRKKIFTGHMVAGYACTLDFSPDMSYLVSGDADGKAHVWDWKTTKLYQKWKAH
EDVCIGILWHPHETSKIATAGWDGLIKYWD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctcctgagcctaagggactatgggagtgatagtgatggtgaattaggtgat
gttgaggagtatgtacagcatttaaaaccaattgagagtggaaatacgatatctcaagat
ctacagattgttgtttcacccgaagttacgtctacgaaagaacttgatgatcgccttcat
atagatcccctggagaaagagctgaagtataaccctaaatatgaggagctgtttgcccca
actcttggacctcaaaaaccagaatccaagtaccaagaagtcgacagaaacacccttgct
ggccatgtagaacctgcacactttaatgaatttgaatttgaatcacaaagacgcactttc
acaacatttggttacgctattgacccgtcaatatctgggaaacctgaggatgggaggaga
tatgtcggggatgtttctacagccagtgaaacgtctggatttacaatttttgaaactaag
cacaaagcagagcaacctactaggcgtaaacgtgacaagaatgatgatgctgcagatatt
gatggatttaaaggcccttgggcaaagtatcaaaatgaacagactgtgatgaagccatct
gaagaagagcaacatgcactagatgaaatattagctaaacgacaaaagcgaggtaaacag
acggatgataagcctattgatgagaaatctctgttgcacataaaggatgcttatgattat
caaggacggtcatttttacatattccccaagatgttggtgtgaatttgaagtccccagaa
ccacctgagaagtgtttcatgcccaagaaattaatccacacatggaagggtcacaccaaa
ggcgtgtctgccatcaggtggtttcctggatcaggacacctcttgctctcttgcgctatg
gacacaaagattaaaatatgggaagtgtacaacaaccgccgttgcatcagaacatatatg
ggacacaaacaggctgtgagagatgcttgctttgataatgaaggaaaacagtttctttct
gctggttatgatcgatttatcaaattatgggacacggaaactggagactgcatctcccac
tttaccagtcgaaaaattccatattgcgtcaagttccatcctgaagaagaaaaacaaaat
ctttttgtagctggcacatcagataagaaaattgtgtgttgggatattagaaccaaagag
atagttcaggagtatgatcgtcatttaggagctgtaaatactatcacattcatcgatgaa
aacagaagatttgtctcgacttctgatgacaagagtttacgtgtgtgggaatgggacata
cccgttgatttcaaatacattgcagatcccacaatgcattccatgccagctgtcactctt
tcccccaataagaagtggttagcatgccagagcatggacaataaaattgtaatattttca
gctttagatcgcttcaagatgaatcgaaagaagatatttacaggacacatggtagcagga
tatgcctgtactcttgatttctcccctgatatgtcttatttggtgtctggtgatgcagac
gggaaagctcatgtttgggattggaaaactacgaaactctaccaaaagtggaaagctcat
gaggatgtgtgtattggtattctgtggcatccacatgagaccagtaagatagctacagca
ggatgggatggtctcattaaatactgggattaa
DBGET
integrated database retrieval system
