KEGG   Homarus americanus (American lobster): 121871704
Entry
121871704         CDS       T07477                                 
Name
(RefSeq) LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
hame  Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:hame00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hame04812]
    121871704
Cytoskeleton proteins [BR:hame04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     121871704
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 NBCH_WD40 eIF2A Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR19_1st RMC1_N Beta-prop_IP5PC_F Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 121871704
NCBI-ProteinID: XP_042230049
LinkDB
Position
Unknown
AA seq 924 aa
MTFLQITKTHDLPITKTHDLPVQITKTHDLRQITKTHNQAHDSCTDKSRHMTPVQITKTQ
EFRRMINVNCLALGHKSGRCWFGGDDKKVNLWLLXKPNCILSLSGHTTPVECVRFGGSED
LVCAGSLSGALKIWDLEATKIVRTLTGHKANIRCIDFHPYGDFIGTGSLDTNIKLWDIRR
KGCIFTYKGHNLTVNSLKFSPDGQWIASAGEDCNVKLWDLRAGKMMTEFAQHTGPVSDVE
FHPHEFLLASASHDRTVNFWDLEKFSLVSATDADTGPIRTIAFHPDGDCVYAGSPDVLKV
YGWEPARTFDTVAMGWGKIQDIAIAQNQLIGAGFHGVHVSLYVVDLKRVQPFGGPQQDVP
STFRYGAAIRKSFSKDKNSGKATAESMKTEEASDTGGEEPQEEDPPPEITNLNDYNGIFK
THRELQRTPPPLEPKPAINNNNDPMVPQVMTSPDVIRPEPIRPSPPTAARPTTPDAARRG
SSQSVSHLPRPIATPRETVTPRYDNGNQPQTPPLNPTSFPSLYERRSSNQEQSAYASPHR
DYTLSGSSSPNMSQPYRARAVSESRRDTRESSSAPYEAEGNRYHIRHSPSEPHLVRQSSS
PGPPSSSPAYHDSAPSLPQLARPDLTNLNRTQASSKPDLTSHSKPMDRPALVRPAPRPHP
SQSPEMSYMGTPKTTSPEISYMGTAKEPPDYGYRQDGLKDIEYPSAFSHIPPDKSINFDD
FLPNKLSSLGLDGSSSSGGSGLTGIAGNEMSEQEVLSSIMRGHSSMMSVITARSRGLQVT
HKLWQTKDLKTAVDHALNTGDQALLVDLLGIINLRPSIWNLDLLTALLPPVSLLLQSKYE
TYVTCGCNALKLMIKNFAVMIKSNMSGPIHSVGVDISREERYNKCIECYNHMMSIRAFLL
KRQTVPGKLGPMYRELAILMQAFE
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgaccttcctacagatcaccaagacgcatgacctccccataaccaagacacatgacctc
cctgtacagataaccaagacacatgacctccgacagataaccaagacacataaccaagca
catgactcctgtacagataaatcaagacacatgacccccgtacagataaccaagacacaa
gagttcaggcgcatgatcaatgtgaactgcctggcgctgggccacaagtctggccggtgc
tggttcggcggcgatgacaagaaggtcaacctgtggctgctanncaagcccaactgtata
ctgagtttgtcaggacacacaactcccgtggagtgtgtacgatttggtggctctgaagat
ctggtgtgtgctggatcactaagtggtgcactcaagatatgggacctggaggctaccaag
attgtccgtacactcacaggtcacaaggcaaacattcgctgtatagacttccacccttat
ggagacttcattggtactggctccctcgatactaatattaagttatgggacattcggcgg
aaaggctgtattttcacttacaaaggccacaaccttactgtcaacagtctcaagttctct
cctgatggacagtggattgcatcagctggggaggactgcaatgttaagttgtgggacctt
cgtgccggcaagatgatgacggagtttgctcagcacacagggccagtcagtgatgtggag
tttcaccctcatgaatttctccttgcttctgcctctcatgatcgaactgtcaatttttgg
gatctggaaaaattctcactggtgtcagctactgatgctgatactggacccatcagaaca
atagccttccaccctgatggtgactgtgtgtatgcggggtctcctgatgtcttaaaagtg
tatgggtgggagcctgcacgcacttttgacactgtggctatgggctggggcaagatacag
gatattgccattgctcaaaatcagttgattggtgcaggcttccatggtgtgcatgtgtct
ctgtatgtagtggatttgaagcgtgtacagccttttggagggccacaacaagatgtgcca
tcaacttttagatatggtgcagccatacgcaagagcttcagcaaagataaaaattcagga
aaagccacggcggagtccatgaagactgaagaagcgtccgatactgggggcgaggaaccc
caggaggaggatccccctccagagatcaccaaccttaatgactacaatggaatatttaag
acccaccgggaactacagagaacaccacccccgctcgagcccaaacctgccattaacaat
aataatgatcctatggtgcctcaagtgatgaccagtccagatgtgatacgaccagagcca
ataagacccagtccacctacagcagctagacctactactccagatgctgcacgtagagga
tcgtcccaaagtgtctcacaccttccacggccaattgccacccccagagagactgtcact
ccaaggtatgataacggtaaccaaccacagacgccacccttaaaccccaccagttttcca
agtctgtatgagagacgcagttctaatcaggagcagtctgcttatgcctctcctcacaga
gactacacactaagtggcagtagcagtccaaacatgagtcaaccatatagagcacgtgct
gtgtcagagagcagaagagacaccagagaatcctccagtgctccctatgaagctgaagga
aacaggtaccacatcagacatagtccatcggaaccacatttagtgagacagtcatcatct
ccaggccccccatcaagctcaccagcttaccatgactcagccccaagtttaccacagtta
gcacggccagatctcaccaacctaaaccgaactcaggcatcatctaaacctgacctcact
tcacactccaagccaatggatcgaccagccctagtcaggccagcaccacgtcctcatcca
tcccaaagtccagaaatgtcatacatgggcactcctaagacaaccagccctgaaatttcc
tacatgggcactgcaaaggaacctcctgattatggttatcgtcaggatggtttgaaagat
atagaatatccatctgcattttcacacataccacctgataagagtattaactttgatgac
tttttgccaaataaactgagtagcttgggcttagatggaagttctagctctgggggaagt
ggtctaacaggcattgcaggcaatgaaatgtctgaacaggaagtgttatccagcatcatg
cgtggtcactcctctatgatgtctgtcataacggctcgatctaggggcctgcaggttaca
cacaagttatggcaaacaaaagatctcaagactgctgtggaccacgccctcaacacaggt
gaccaggctcttctcgtggatctcttgggcatcattaatctcagaccgtcaatatggaac
ctggatttattgacagctctccttcctcctgtcagtttactgctgcaaagtaaatatgaa
acgtatgtaacttgtggatgcaatgccctgaagctcatgatcaagaattttgcagtcatg
ataaaatctaacatgtctggcccaatacacagtgttggggtcgacatatcaagagaagag
cggtacaacaaatgcatagagtgctacaatcatatgatgtcaatacgagccttccttctc
aagcgacagactgtccctggcaagctaggacccatgtatcgggagttagccatcctcatg
caagcctttgagtag

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