Homarus americanus (American lobster): 121871761
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Entry
121871761 CDS
T07477
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121871761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121871761
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121871761
U7-dependent histone pre-mRNA processing factors
121871761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
121871761
NCBI-ProteinID:
XP_042230133
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MTSIVKFEGVWGVGDETPHCYLLTVDDFTFLLDCGWDEKFDKAYIDRLAKVLPRVDCVLI
SYPDPLHMGALPFLVGKCQLSCPVYATIPVFKMGQMFMYDWFQSHHNYDLVEHFTLDDVD
SAFELITQVKYNQSIPMRGKGIGLNISAQPAGHMIGGSIWRILKDGEGDIVYAVDFNHKK
ERHLGGCELDKISRPSLLITDAFNASYRQERRRHRDEKLVAQLQETCRSGGNVLVATDTG
GRVLEMTHMLEQMWSTRESGLSAYSLCILSNTGYHVIHFAKQMIEWMSEKLTKAFDSLRT
NPFSFKHLKFCHNLTDLSRLPSPKVVLASFPDLECGYARELFVQWATNPKNTIILTSRTG
PDTLARRLIDNPQIRTFKLLEKRRMKLEGPELDEHYRQKREEEQQQHRIKMEEVESSSDS
EGEEGLEAGKHDIIVLHEKAGTQSMFRSRKHHPMFPFHEEKVRGDDYGEFINLEDFDIAS
MKEENKENLDLQIPYEEEDIMDMEEVPSKCVSQTVTVRVAAQVLFIDFEGRSDGESIRKI
VESMHPLRVILVRGSQTDLLAFSENIRSMTRAKVFTPSLGQVVNASMESHIYQIKLAESL
VSSLMLQPAGRDMEVAWVDGCVSFPTENINETVQEGDRQVISSENQRDSDMATLRVISKE
QALPHIPVFINDIRLSEFKQVLSRAGISSEFNAGILWCANGTLALKKQDSGSISLEGPLS
QDYYEIRELLYSQYAIL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctattgtgaagtttgaaggagtgtggggagttggggatgaaacccctcactgc
tacctccttactgttgatgactttacattcctcctggactgtggctgggatgaaaaattt
gacaaagcttacattgaccgactagcaaaggtcctaccacgtgttgactgtgttttgatc
tcatacccagaccccctacacatgggtgccttaccattcttagttggcaagtgtcagtta
tcatgcccagtatatgcaactattcctgtcttcaagatgggacaaatgttcatgtatgat
tggttccagagtcaccataattatgacctggtggagcacttcacactggatgatgttgat
tcagcctttgaacttattactcaagttaagtacaaccaaagcatccccatgagaggaaaa
ggaataggtttgaacatctctgctcagcctgcaggtcacatgattggaggttctatttgg
agaattcttaaagacggagagggggatattgtgtatgctgttgactttaatcacaagaag
gaacgccacttaggaggctgtgagctggataagataagtcgtccatctcttcttattact
gatgccttcaatgcttcatacagacaggaacgaagacgtcatcgagatgaaaagctcgtc
gcccaactacaagagacgtgtcgcagtggaggaaacgtcctggttgccactgacacgggt
gggcgagtgttggaaatgacacacatgctagaacaaatgtggagcacgcgagagagtggt
ctgtcggcttactctctgtgtatcctctccaacactggctaccatgtcatacattttgct
aaacaaatgattgagtggatgagtgagaagctgaccaaagcctttgactctctacggaca
aacccttttagcttcaagcaccttaagttttgtcataaccttactgacctcagtcgtcta
ccctcccccaaggttgtgttggcaagtttccccgacctggaatgtggatatgcacgagaa
ctgtttgttcagtgggccaccaatcctaaaaataccatcatcctaacatcacggactggg
ccggacacactggcaagacgacttatagataatccacagattagaacctttaaacttttg
gagaagagaagaatgaagctggagggacccgagctggatgaacattaccgtcagaagcga
gaggaagagcagcaacaacacagaattaaaatggaagaggtggagtcatccagtgatagt
gaaggtgaggaaggactggaagctggcaagcatgacatcatcgtgctacacgagaaggct
ggtacccagagtatgttccgtagtcgcaaacatcatcccatgtttccctttcatgaagaa
aaggtacgaggagatgactatggagagttcattaacctagaggactttgacatagcatcc
atgaaggaggaaaacaaagagaatttagatctacagattccttatgaggaggaagacatt
atggacatggaagaggtgccatccaagtgtgtgtcgcagacagtgactgtaagagttgca
gcccaggtgctctttattgactttgagggtcgtagtgatggagaaagtatacggaaaatt
gtggagtccatgcatcctctgcgagtgatcctggtgagagggtcccaaactgacctgcta
gctttctccgagaacatccgtagcatgactcgagctaaggtgttcactccaagcctcggg
caagtggtcaatgcctccatggagtctcacatctaccagatcaagcttgctgagtcacta
gtctcatcgctgatgctacaacctgcagggcgagacatggaggtagcttgggtggatggc
tgtgtttctttccccactgaaaacattaatgaaacagtacaagagggggacaggcaagtt
atctcaagtgagaaccagcgggatagtgacatggcaacactcagggtcatctcaaaagaa
caggcacttccacatattcctgtgttcattaacgacattcgactaagtgaattcaagcaa
gttctcagtcgagcgggaattagttctgagttcaacgctggcattctctggtgtgccaat
ggaactttagctctaaaaaaacaagactctggcagcatatccctggaaggtccactgagt
caagattactatgagattcgtgagctactatactctcagtatgccatattgtaa
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