Homarus americanus (American lobster): 121871806
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Entry
121871806 CDS
T07477
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hame04131
]
121871806
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hame04147
]
121871806
Membrane trafficking [BR:
hame04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121871806
Exosome [BR:
hame04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121871806
Exosomal proteins of bladder cancer cells
121871806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
HypA
Motif
Other DBs
NCBI-GeneID:
121871806
NCBI-ProteinID:
XP_042230239
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MLTKFETKSARVKGLSFHSKRPWVLASLHSGIIQLWDYRMCTMVDKFDEHEGPVRAVCFH
QQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTEFHQEYPWILSASDDQTIRIW
NWQSRSCVSILTGHNHYVMCARFHPNQDLIVSASLDSTVRVWDISGIPGKPGGLRKKNVS
PGMGGIGGSDDHHTRNPELFSAGDATVRHVLEGHDRGVNWAAFHPTLPLVISGSDDRQVK
LWRMNDCKAWEVDTCRGHYNNVSCVMFHPRQELILSNSEDKSIRVWDMAKRICLHTIRRE
HDRFWVLAAHPSLNLFAAGHDGGMTIFKLERERPAYALHGNLLYYVKERFLRRLDLTKNK
DVAVMQLRAGSRAPVYSMSFNPAENAVLLTTRTHNVDNSNYDLYQIPKDTDPQNPDSPDS
KRSAGLTAVWVARNRFAVMDKSHQLVIKNMQNEVTKKVTTPPCDEIFYAGTGMLLLRDSD
GVSLFDVQQKRVLGTARIAKCRYVVWSANMTTVALLSKQTILICNRKLERLCSIAENNRV
KSGSWDDSGVFVYTTSNHIKYALTNGDHGIIRTLELPVYVTRVSGSSVYCLDRQATPRVL
TIDSTEFRFKLALVQRKYDEVLQMVRGAKLVGQSIIAYLQKKGYPEVALHFVKDERTRFL
LALECGNIDVALDAAKALDDKGCWEKLAEHALLHGNHPVVEYCYQQTKNYDKLSFLYLIT
GNLAKLRRMMKINEIRKDYEGWYTNALYLGDVPERIRVLKACGKTSLALLTAATHGHTQE
AESLASHVETGAIPEPLPNAQLLQPPAPIQPMDTAWPLLTVAKGFFDTAVASGKSAAGAA
AAMAVDDVGDIAGDAWGDDDDDENIDDADIALDGGDGEGGGWEVDDDLELPPELEGTVSS
GVGADGEDGYFVPPPRGHPPTHGWTQRSQLAIDHVLAGAFESATRLLHDQVGVVNFEPYR
ELFLSSFAHSRTSYPSAPGLPSLFAYPSRNWRTAQTKDQLPALGLKLSNLMDRLKEASQL
TTAAKFSEAVEKLRGILLAVPLIIVDTKQEVSEAQNLLQCKEYVVGISMELYRKSHGKTT
QEELKRSLELAMYFTHCELQPGHQILTLRTAVNLAFKMKNYKMAMSFGRRLLNLGPRPEV
AQNIRKVVQACEKNPVDELQVQYDEHNPFTMCAKSYLPIYRGKPEVQCPLCGASYLPEHR
GITCTICTVAQVDKDCIGLRISSLQFR
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaaaatttgagacgaagagtgcaagggtgaagggcttgtcctttcactccaaa
cggccctgggttctggccagcttgcacagtgggatcatccagctatgggactatcgtatg
tgtacaatggtggacaagtttgatgagcatgaaggacctgtgcgagcagtttgtttccac
cagcagcagccattatttgtgtctggaggagatgactacaagattaaggtatggaactac
aagttacggagatgtctcttcacattgcttggccacttggactacatccgtacaacagaa
tttcatcaggagtatccctggatcctatctgcctcagatgaccagacaatccgtatctgg
aattggcagagtcgttcatgtgtatccatcttgactgggcacaaccattatgttatgtgt
gctcgtttccatcctaatcaagacctcattgtgtcagcttccctggattcaacagttcga
gtgtgggatatctcaggtattcctggcaaaccaggaggtcttcgaaagaaaaatgtttct
cctggaatgggcgggattgggggtagtgatgaccaccacacccgcaacccagaacttttc
agtgcaggggatgccacagtgcgtcatgtgctggaaggtcatgaccgtggcgttaactgg
gctgcattccaccctactctccctctggtcatctcaggctcagatgatcgtcaggttaag
ctctggaggatgaatgattgcaaggcttgggaagtagacacctgccgtgggcactacaac
aacgtgtcatgcgtcatgtttcacccaagacaagaattgatattatctaactctgaggat
aaatccatccgtgtttgggacatggccaaaagaatatgtctccataccatccgtcgtgaa
catgacagattctgggttctggctgcacatccctcgctcaacctctttgctgctggtcat
gatggtggcatgactattttcaagctggagcgagagagacctgcttacgccttacacggc
aaccttctgtattatgtgaaggagcgctttctccgtcgtcttgatttgaccaaaaacaag
gatgttgcagtgatgcagttgcgtgcaggttcccgcgctcctgtgtatagcatgtctttt
aatcctgcagaaaatgctgtccttctcaccactcgcacccacaatgtggataacagcaac
tatgatttgtatcagatccccaaggatacagacccacagaaccctgactccccagattcc
aagaggtctgctgggctgacagctgtatgggttgcaaggaaccgctttgctgttatggac
aagagccatcagttggtgatcaagaatatgcagaatgaagtgaccaagaaagtgacaact
cccccgtgtgatgagatattttatgctggcactggcatgctcttgcttagggatagtgat
ggtgtgtctctctttgatgttcagcagaagagagtgttgggaacagctcgcattgccaag
tgccgttatgttgtgtggtctgccaatatgaccactgtggcattactgtccaagcaaaca
atactcatctgtaaccgcaaactagaacgcctctgttccatcgctgagaataacagggtt
aaatctggttcctgggatgatagtggagtatttgtgtacacaacaagcaatcacataaag
tatgcactgacaaatggtgaccatggcattattcgcacactggaattgccagtgtatgtg
actcgggtgtctggtagctcagtatactgtctagatcgtcaagcaacccctcgtgtcctt
accattgattcaacggaattccgcttcaaattggctcttgtccagcgcaaatatgatgaa
gtcctacaaatggttcgtggagccaagttggttggccagtccatcattgcatacttgcag
aagaagggttaccctgaagtggcccttcactttgtcaaagacgagcgtacacgattcctt
ttggctctggaatgtggtaatattgatgtagctctagatgctgcaaaagccctggatgat
aaaggatgctgggagaaattggcagaacatgctctcttgcatggaaaccaccctgttgtt
gagtactgctaccagcagaccaagaactatgataaactgtccttcctctaccttatcact
ggaaatttggccaagctgcgacgcatgatgaagatcaatgaaatccgtaaggattatgag
ggctggtacaccaatgctctttatctgggagatgtaccagaacgcattagggtcttgaag
gcatgtggtaagacgtctttagcacttctgacagctgccactcatgggcacactcaggaa
gccgagtctcttgcatcccatgtggagactggtgctattccagaacctcttcccaatgcc
cagttgctacaaccacctgcaccaatacaaccgatggacactgcctggccactcctcact
gttgctaaagggttctttgacacagcagtggctagtggcaagagtgctgcaggagcagca
gcagccatggcagttgatgatgtgggtgacatagctggagatgcctggggtgatgatgac
gatgatgaaaatattgatgatgctgatatagccttagatggtggagatggtgagggtgga
ggctgggaggttgatgacgaccttgagctgccaccagaactggagggaacggtttcatct
ggtgttggtgctgatggcgaagatggttactttgtgccacctcctcgaggtcatccccca
acacacggatggacgcagcgcagccagcttgccattgaccatgtgctggctggtgccttt
gaatctgccacaagactattgcatgaccaagttggtgtggttaactttgagccataccgt
gagttgttcctgtcatcttttgcccactctcgcaccagctacccaagtgccccaggactt
ccttccctctttgcctacccgtcccggaactggcggacagcacaaactaaagaccagttg
cctgctcttggtttaaagctgtcaaatcttatggatagacttaaggaagcttcacagtta
actactgcagccaaattttctgaagcagtagagaaactgagaggaatactgctggctgta
ccactcatcattgtagacacaaagcaggaggtcagtgaagcgcagaatttactgcagtgt
aaagaatatgtggttggcatcagcatggagctctatcgcaagagtcatggtaaaacaaca
caagaagaactaaaacgctctctggagttagctatgtatttcacccattgtgagctacag
cctggccaccagattctaacactaagaactgctgtcaacttagctttcaagatgaaaaat
tacaagatggcaatgagctttggtcgtcgcttattgaatctgggaccacgaccagaggtg
gctcagaatatcaggaaggttgtacaggcatgtgagaaaaatcctgttgatgaattacaa
gttcaatatgatgaacacaaccccttcactatgtgtgccaagtcatacttaccaatatac
cgaggtaaaccagaggtgcagtgtccactgtgtggtgcatcatacttaccagagcatcgg
ggcatcacctgcacaatctgtactgttgcacaagttgacaaggactgcattggcttacga
atttcttccttacagtttcggtag
DBGET
integrated database retrieval system
