Homarus americanus (American lobster): 121872006
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Entry
121872006 CDS
T07477
Name
(RefSeq) intraflagellar transport protein 56-like isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hame03037
]
121872006
Cilium and associated proteins [BR:
hame03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121872006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_2
TPR_9
TPR_1
TPR_7
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
121872006
NCBI-ProteinID:
XP_042230567
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MILSRAKPALASNAAAEVNSSGNKKVLPKLDDFLKKRDFTGAITLLEFQRSSGNTNELND
QWIGYCAFHLGDYKRALLEFQTLTVHHKSPAPENWISLACCYFYLGMYPEAEESAEKAPK
TALRTRLFFHLAHKFNDEKRLMMHHQQLEDVIEDQLSLASIHYLRSHYQEAIDIYKRILL
DNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQHYPDSPIAINLKACNHFKLYNGKAAE
QELRALQDVTSSPLTFAQDLVRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLKQD
EVQEAYALLKDLEPTVPQEYILKGVVNSAIGQETGSRENLKIAQQYFQLVGGSASECDTI
PGRQCMASCFFLLKQFDDVLLYLNSIKSYFYNDDTFNFNYAQAKAAVGDYKEAEEVFLLI
QNEKIKNDYVFLSWLARCYIMNSKPRLAWELYLKMETSAEAFSLLQLIANDCYKMGQFYY
AARAFDVLERLDPNPEYWEGKRGACVGMFQMIIAGKEPKDSLGDILQLLRNTANPQVEGI
IRVIKKWAKDNHIPV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatactgtcacgtgcaaaacctgctttggcttcaaatgcggcagcagaagttaactcc
agtggtaacaagaaggtgttacctaagttggacgattttctaaagaagcgagactttaca
ggagctattactctattggagtttcagcgtagtagtggcaacacaaatgaactaaatgat
caatggattggatattgtgcattccatctgggtgattataaacgtgcactactagagttt
cagacccttacagtgcatcacaagagcccagccccagaaaactggatcagtctagcatgt
tgttacttctacttaggcatgtaccctgaggctgaggagtcagcagaaaaggctccaaaa
acagctcttcgaacaaggctgttttttcacctggcacacaaatttaatgatgagaagcga
ctgatgatgcaccaccagcaactggaagatgtaatcgaagaccagcttagtttggcctct
atacactatctacgttcacactatcaagaagccattgatatttataagcgtatattactg
gataatagagagtacctggcactgaatgtgtatgtggccttgtgttactacaagctagac
tactatgatgtatctcaagaggtgctggcagtgtacctccaacactacccagactctcct
attgctataaatctcaaagcctgtaaccattttaaactctataatgggaaagctgcagaa
caagaactaagagcattacaggatgtgacatcttctccactaacatttgcccaagatcta
gtgcggcacaacttggtggtctttcgaggtggggagggagcactgcaagtcctcccccct
ttggttgatgttattcctgaagctagactaaacctagtcatatactatcttaaacaggat
gaagtacaggaggcttatgctctcctgaaggacctagaaccaactgttccacaagaatac
attctaaagggagtagttaattcagccataggtcaggaaacaggatcgcgtgaaaacttg
aagattgcccaacagtacttccaattggtgggtgggagtgcctctgagtgtgatactatt
cctgggaggcagtgcatggcatcctgtttcttccttctcaaacagtttgatgatgtcctt
ctgtatctgaactcaattaaatcttacttctacaatgatgatacattcaacttcaattat
gctcaggccaaagctgctgtaggtgattacaaagaggcagaagaagtttttcttcttata
caaaatgagaagataaagaatgactatgtatttctctcttggctggccagatgctacatt
atgaacagtaagcccaggctagcttgggaattgtacctaaagatggaaacatcagcagag
gccttcagtttattgcaactaattgccaatgattgctacaagatgggtcagttttactat
gcagcaagagcatttgatgttctagagagactggatcccaatccagaatattgggagggc
aagagaggtgcttgtgtgggcatgttccagatgataattgctggcaaagagccaaaggat
tcacttggtgacatcctacagttacttcgaaacactgccaacccccaagtggaaggaatc
atccgtgtcatcaagaagtgggctaaggacaaccatataccagtgtag
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