Homarus americanus (American lobster): 121872019
Help
Entry
121872019 CDS
T07477
Name
(RefSeq) uncharacterized protein LOC121872019
KO
K12597
protein AIR1/2
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121872019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121872019
03016 Transfer RNA biogenesis [BR:
hame03016
]
121872019
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
121872019
Transfer RNA biogenesis [BR:
hame03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
121872019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
121872019
NCBI-ProteinID:
XP_042230590
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSYNNDDEDWSSSSEFDSEDEEMDYGLYAQLYFEPNLEATYASTSSQVDHGISLEETFEK
NINGITDSSETSLLAKEDKNKPQQGDKTCMSNHPSQFCLSEESNAPCSKVPQTQARKERD
RLSSICSEGSIPGHIPLDDLYCNIITIDDDVDIEADTSNKLSILDRNTISQNDGHESRRK
SKRKRNDEGDSDECVEEESRCDSLVLAEPNSAGTTISKRKFNLVDDCINFDSDVYACTPP
RPKVYEIVTLSSDAQSESDGEVTVRTKTSEAGCSLDQLTEETFINNPKRARVVQNSINNT
TKNYMRATVRTHSALKIDEVLLSSDDDSDSDISVLDLKNSPNLTLNIDTQLSTLLQDLAE
DDNGVNEQHKLTKKNCRLSLLPQTIDFSRGRLDTRKKSTCDHWTQEMVNFYDSDVSEDLE
IKQVHQQQTNAKSSWGIISSDYLIKHSRRYYDAQVRCTRCKQYGHMVKECPRVPHCHLCS
GTDHIYRHQCPDNCCFRCGGNPHMFCPDTANSLTCSLCGYKGHRKELCPDLWRRFHNTIS
GEVPEPPPRTKTRPTRDRFCYNCGKRGHYGHNCPKSFQNHFYLKVPQSVISYSSPTSLKD
GSSVVSSEGPQIMEYDIIKFPIKDKEDERLLEQGGVITKEMDSHSGVNVHIDSQAHCAKK
EPAVTIPIKAKEIGRLLGQRGVIMKEIMRRSGAYLHIDCLLPNKKVFIYGSSEACCAAQE
MVEVLLGQKPFAGLEDFISFVSKNQSSAIPLTGGYVQSLKQARKEKRQIKKTTYSPLQFN
YLLQICGSKSKFLKTLRQNLSSLKNVNPDIGHSLIKLKEIQTALKQKHVIPYENSIKEMM
RQVSCVVVGAEKYTYGQLRNLMMKIQKSKNNCISEDMCSKIAFKLGNIYSPHLGQLDELI
EFGTRFEQSRLDKSKNEGNKTKKVKKLKAKILKDGETIQTNQGNVKKKKTSKKVKVTTGK
KVKVTTGKNDKFKKRRLRKKERKGKGNILEENWTMENEGGTGTTNKNDQKSIESKGKANQ
KVKPPTKGDAKKKGNRKQKKKIICWKCEQVKYIRNGCKCKKLQGHVKGTKQTAQNDNPNT
NVMFGDQ
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaataatgatgatgaagattggagctctagcagtgaatttgacagtgaggat
gaagaaatggattatggtttgtatgctcagctatactttgaacccaacctagaagctaca
tatgctagtacaagtagtcaggttgaccatggaatttcactggaagaaacttttgaaaaa
aatattaatggaatcactgatagtagtgagacatctttattggcaaaggaggataagaat
aagccccaacaaggggataaaacatgtatgtcaaatcacccaagtcagttctgtttatct
gaagaatcaaatgctccttgtagcaaagttccacaaacacaagcacgaaaagagcgagac
agattgtcaagtatatgcagtgagggcagtatcccagggcatatacccttagatgacctt
tactgcaacataattactattgatgatgatgtagatattgaggcagatacaagtaataag
ttatcaatattggatagaaatacaataagtcaaaacgatggacatgagtctagaaggaag
tcgaagaggaagaggaatgacgagggtgattctgacgagtgtgtggaggaggagtcaaga
tgtgatagtttggtgttagcagaaccaaacagtgctggaacaactatatcaaagcgaaaa
tttaatttggtagatgactgtattaattttgacagtgatgtttatgcatgtacaccacca
aggccaaaggtgtatgaaattgtaactttgtcatcagatgctcaaagtgaatcagatgga
gaagtcacagtcagaacaaagacatcagaggcagggtgttctctggatcagcttacagaa
gaaacttttattaataaccccaaaagggccagagtggtgcaaaactcaataaataataca
acaaaaaattatatgagagcaactgtacgcacgcattcagcccttaagatcgatgaagta
ttactaagctcagacgatgatagtgattctgatattagtgtgttagacctgaaaaacagc
ccaaatctcaccctgaatattgatacacagttatccactttgttacaagacttggctgaa
gatgataatggtgtcaacgaacaacacaagttaactaaaaagaattgcaggttatcatta
cttcctcaaaccattgatttttcaagaggtcgacttgacacaagaaaaaagtcaacctgt
gaccactggacgcaggagatggtcaacttctatgactcagatgtctcagaagatttagaa
ataaaacaagtacatcagcaacaaacaaatgcaaagtcttcctggggtattatctcatca
gattatctgatcaaacatagtaggaggtactatgatgctcaagttagatgtactcggtgt
aaacaatatgggcatatggttaaggaatgccccagagttcctcattgtcacctttgttct
gggacagaccatatctatcgacatcaatgccccgacaactgttgttttagatgtggtgga
aatcctcatatgttttgtcctgacacagccaattcattgacatgcagtttgtgtggatat
aaaggccatcggaaggagctctgtcctgatctgtggagaagatttcacaacacaatttca
ggggaagtgccagaacctccacctagaaccaaaacccggcctacaagggatagattttgt
tacaattgtggcaagaggggacattacggccataactgtccaaaatcctttcagaaccat
ttctacctgaaagttccccagtctgtcatcagctactcctctcccaccagtcttaaggat
ggatcgtcggttgttagtagtgaaggaccacagatcatggaatacgatataatcaagttt
ccaatcaaagacaaagaagatgaaagactattagaacagggaggtgtgatcactaaagaa
atggatagtcactctggtgtaaatgtacacattgactctcaggcacactgtgctaagaag
gaacctgcagtcacgattccaatcaaagccaaagaaattggaaggctattaggacagcga
ggtgtgatcatgaaagaaataatgaggcgctcgggtgcatatctgcacattgactgtctg
ctgcccaataaaaaggtctttatatatggaagtagtgaagcatgctgtgctgctcaggaa
atggttgaagttttattgggtcagaagccttttgcaggattagaggattttattagcttt
gtgtccaagaaccagagctctgctatacctctgactggaggttatgttcaaagtcttaag
caagcaaggaaggaaaagaggcaaattaagaaaacaacttattccccattacaattcaat
tatcttctacagatttgtggaagtaagagcaaatttttaaaaacgttaaggcaaaacctt
agcagcttaaaaaatgtcaatccagatataggtcactcacttatcaagcttaaggaaatc
cagacagcactgaaacaaaagcatgtaataccttatgagaactccataaaagaaatgatg
aggcaagtttcttgtgttgtcgttggtgctgagaaatatacttatggtcaacttaggaat
ctgatgatgaagattcagaaaagtaaaaacaattgcatttcagaagatatgtgttcgaaa
attgcatttaaactgggtaacatttattcacctcatctgggacagcttgacgaactcata
gagtttggaactcggtttgaacaatcacgtcttgataaaagtaaaaatgaagggaataaa
actaagaaagttaaaaaactgaaagccaagatacttaaagatggagagacaattcaaacc
aatcaaggaaatgttaagaaaaagaaaaccagtaaaaaagtcaaagtgaccacaggtaaa
aaggtcaaagtaaccacaggtaaaaatgacaaatttaagaaacgaaggctgaggaagaaa
gaacgaaaaggaaaaggtaatattctggaagaaaactggacaatggagaatgaaggtgga
actgggacaacaaataaaaatgaccaaaaaagtatagaaagtaagggaaaggcaaatcag
aaagtgaaaccacctacaaagggtgatgcaaagaaaaagggaaatagaaaacagaagaag
aaaataatatgctggaagtgtgaacaagtcaagtacattcggaacgggtgcaagtgtaaa
aaactccagggccatgttaaaggtactaaacaaacagcgcaaaatgacaatcctaatacg
aatgtgatgtttggagatcagtaa
DBGET
integrated database retrieval system
