Homarus americanus (American lobster): 121872291
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Entry
121872291 CDS
T07477
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03013
Nucleocytoplasmic transport
hame03015
mRNA surveillance pathway
hame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121872291
09122 Translation
03013 Nucleocytoplasmic transport
121872291
03015 mRNA surveillance pathway
121872291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121872291
03041 Spliceosome [BR:
hame03041
]
121872291
03009 Ribosome biogenesis [BR:
hame03009
]
121872291
03012 Translation factors [BR:
hame03012
]
121872291
Enzymes [BR:
hame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121872291
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121872291
mRNA cycle factors
Stress granule specific factors
121872291
Spliceosome [BR:
hame03041
]
Complex C
Other components
EJC/TREX
121872291
Ribosome biogenesis [BR:
hame03009
]
Eukaryotic type
90S particles
Helicases
121872291
Translation factors [BR:
hame03012
]
Eukaryotic type
Initiation factors
eIF-4
121872291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_30
AAA_22
TniB
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
121872291
NCBI-ProteinID:
XP_042230915
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MAEGRVRRVIPEDLSNVEFETSEEVQVVPTFDNMGLREDLLRGIYAYGFEKPSAIQQRAI
RPIIKGRDVIAQAQSGTGKTATFSVSILQILDINVRETQVLTLSPTRELAVQIQKVVLAL
GDYMSVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRTLRTRSIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggtcgagtacggcgggtcatccctgaggatctctctaatgtagagtttgag
acgagtgaggaggtgcaggtggtacctacctttgataacatgggtctgagagaggaccta
ctcagaggaatatatgcctatgggttcgagaaaccatcagcaattcaacagcgtgccatt
cgtcccatcatcaaaggccgtgatgttattgcccaggcccagtctggtactggtaaaact
gccaccttctccgtatccatcctccagattttggatattaatgttagggagacccaagtc
ctcacactgtcacccaccagggagctggctgtgcagattcagaaagttgtactggcactt
ggagattacatgagtgtacagtgtcatgcatgtattggaggaacaaaccttggggaagat
attcgcaagttggattatggacagcatgtagtttcaggcactccaggcagagtgtttgac
atgatcagacgccgcacactcaggacacgttcaataaagatgttggtcttggatgaagca
gatgagatgcttaacaaaggattcaaggaacagatatatgacgtgtaccgctaccttcct
ccagccacccaggtgtgcctcatctctgctacattaccacacgagatcttggaaatgaca
tcaaagttcatgacagaccctattcgcattttggtgaaacgtgatgaattgacactggaa
ggaatcaagcagttctttgttgcggtagaacgtgaagaatggaagtttgatactctgtgt
gatttgtacgacacattaaccatcacacaggctgtcatcttctgtaacacgaagcgcaag
gtggactggctgacagagaagatgagggaagctaacttcaccgtctcatcaatgcacggt
gatatgccacagaaagagcgtgatgctattatgaaggaattccgttcaggccagtccaga
gtcctcattacaacagatatttgggctcgaggcattgatgtacaacaggtttccttggtg
attaattatgatctcccaaataaccgtgagttgtacatccatcgtattggtcgatcgggt
cggtttggtcgtaaaggtgtggccatcaatttcgtcaagaatgatgatatccgaattttg
cgagacattgaacagtactattccacacaaattgatgaaatgcccatgaatgttgcggat
ctgatataa
DBGET
integrated database retrieval system
