Homarus americanus (American lobster): 121873026
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Entry
121873026 CDS
T07477
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2-like
KO
K14793
ribosomal RNA-processing protein 9
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hame03009
]
121873026
Ribosome biogenesis [BR:
hame03009
]
Eukaryotic type
90S particles
Other 90S particles
121873026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WDR54
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
121873026
NCBI-ProteinID:
XP_042232261
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MYHNTLVTRVVLQVNKLLTLCGSNRPGHLLKMPFFLRGKRPGDNKRKKPLKKERLSSVTA
TAKKAKYTPDLDEEITSDEDEQYIKGRQVQGEEKEDEEDEETPQEKKVRLARQYLKELQD
QKAQDEEDKVLDDEAIGIQLREDLLKASGKLRKTVANLYIKPELQDFCVLKSKQQKLPIT
CVTVTSDEKYIFSGSKDCSIVKFTLDGKRVGSIPGGRKGTEKVHVGHTSHIFSLAVSSDG
KFLASGDKGGYIHIWNAETLDHLKKFKKHRGAISGLAFRLSTHTLFSASHDRMVMVWNLD
AMAFVENLGGHQDAITGIDALVRESCITSGGRDQSVIVYVLVEDKQLRFSGHQASIDGIK
LVNDKTFVTFAQDGSLALWTTLKKRPHSLVKAAHGYQINGLPNWITAVAAFVNSDLVASG
SMDGFVRLWRVETEGHRTLKPLFAIPVPGVINSMAFTASGNHLVVGVGQEHKLGRWFKEK
AGKNSIVVIHLKNA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtaccacaacacgctggtgactcgtgtggtgctgcaggtaaacaaacttctaacactg
tgtgggtccaaccgtccaggtcacttgttaaaaatgcctttcttccttcgagggaaacga
cctggggataataagcgaaagaaaccactcaagaaggaaagattatccagtgttactgcc
acagccaagaaagctaaatatactccagatctggatgaggagataacaagtgatgaagat
gagcagtatataaaaggaaggcaggtgcagggggaggaaaaggaagatgaagaggatgaa
gagacaccacaagagaagaaagtgaggttggctcgccagtatcttaaggagctgcaagac
cagaaggcacaagatgaagaagataaggtattggatgatgaagccattggcattcaactt
cgggaagatttacttaaggcatctggaaaactgcgaaaaactgttgcaaatctgtacatt
aaacctgagttgcaggatttctgtgttcttaagtctaaacaacagaaactacctatcacc
tgtgtgactgttactagtgatgaaaaatatatattttcaggctccaaagattgttctatt
gtaaaattcacacttgatgggaaaagagtggggagtatacctggtgggcgtaaaggcaca
gaaaaggttcacgttggtcacacatctcacatattttctctggcagtttcctcagatggg
aaatttttggcatcaggtgacaaggggggctacatacacatctggaatgcagaaacactt
gaccatctcaaaaaatttaagaaacatcgtggagccatctctggtttggcttttcgtctt
tccactcatacccttttctctgcctctcatgatcgaatggtgatggtatggaatctggat
gccatggcatttgttgaaaatttaggtggtcatcaggatgcaataacaggaatagatgca
cttgtgagagaatcctgtatcaccagtggaggacgtgatcaatcagtaattgtgtatgtt
ctcgttgaagataagcagttgcggttttctggccaccaggcttccattgatggcatcaaa
cttgttaatgataaaacatttgtaacctttgcccaagatggatctctagccttatggacg
accctaaagaagcgccctcacagtcttgtaaaagcagctcatggctatcagatcaatggt
ctaccaaactggattaccgcagttgctgcttttgttaattctgaccttgttgcatcagga
tcaatggatgggtttgtgcgcctttggagagttgagacagagggacatcgtacactgaag
ccattatttgccatccctgttccaggagtgatcaactccatggcattcacagcaagtggg
aaccaccttgttgttggagtaggacaagagcataaattaggaagatggtttaaagagaaa
gcagggaaaaattctattgttgttattcatttaaaaaatgcataa
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