Homarus americanus (American lobster): 121873041
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Entry
121873041 CDS
T07477
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121873041
03041 Spliceosome [BR:
hame03041
]
121873041
03036 Chromosome and associated proteins [BR:
hame03036
]
121873041
Enzymes [BR:
hame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121873041
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121873041
mRNA cycle factors
Common to processing body (P body) and stress granule
121873041
Spliceosome [BR:
hame03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121873041
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121873041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
121873041
NCBI-ProteinID:
XP_042232288
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MSNAPTHNGVGLERQFAGLGLEGRDHIGQRGGGRGGRGGGRYVPPHLRNRLEDAPPPGEN
DYTSDRNSRDGFGSWYGSRSFQNTGRTWDQERDRDQYSSGRKNGDLGSNNYQRRDNRGGG
SGGGGTTGGGTTGGTGYRGNDGQRFREHDDRWRGSRDNRGGGGGGYEDRYRDGGGVNGPP
RNTRWIEDERDRSSGGGGGGGSSNSRWQDRGNDRDDWAQPLPRNEVLEAELFTSTAGPVS
NSGINFDKYDDIPVEATGDDVPGSISSFADIKLTEIIKMNISLARYDRPTPVQKYALPFI
LAKRDLMACAQTGSGKTAAFLVPILNQIYEQGPVQVKNNNPRGRSKQFPLALVLAPTREL
ATQIYDESRKFSYRARVRPCVVYGGADVVSQMRDLSRGCHLLVATPGRLADMIDRGKIGL
DSCKYLVLDEADRMLDMGFEPQIRRIVEEDNMPPTGQRQTLMFSATFPKEIQRLAQDFLD
NYIFLAVGRVGSTSENITQKIVWVAEEDKRSFLLDILNAAGLDRLNEATKDEKLAMGVPP
QKEESLTLVFVETKKGADALEEFLYRHGYPVTSIHGDRSQREREDALRVFRSGQCPILVA
TAVAARGLDIPHVKHVINFDLPSDIEEYVHRIGRTGRMGNLGLATSFFNDKNRNMVRDLV
ELLQEAKQELPKWLEAIASETRWGGGGSARGRSGGKRFGGGFGSRDYRQADRTKGPHTSG
PARPGGGFNSFGGVNISAPPHFNHYGGYGGFSGGGGGGYNSYNTSGASGTDWWGN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcacccacccacaatggagtaggtctagagcggcagtttgctggtctaggc
ttggagggacgagaccacattggtcaacgtggaggtggccgtgggggccggggaggaggc
cgctacgttccccctcatcttcggaaccgattggaagacgcaccaccaccaggtgagaac
gattatacttcagataggaattctagggacggtttcggaagttggtatggttcccgcagt
ttccagaacactggccgtacctgggaccaggagagagatagagatcagtacagcagtgga
cggaagaacggagatttagggtcaaataactatcagaggagagacaaccggggtggtggc
agcggcggcggcggcaccactggaggaggcaccaccggaggcactggatacagagggaat
gatggacagcgtttcagggaacacgatgaccgctggagaggaagccgggataatcgcggt
ggcggtggtggtggatacgaagatcgctaccgtgatggtgggggggtgaatggccctccc
cgtaatacacgatggatcgaagatgagcgcgatcgctcctcaggcggcggtggcggcgga
ggaagctccaatagccggtggcaggatcgtggcaatgaccgcgacgactgggctcagcca
ctgcccaggaatgaggtcctggaagctgagctcttcaccagcactgccggtccagtatcc
aatagcggtatcaacttcgacaaatatgatgacattcctgtagaagctactggagatgat
gtccctggctctatcagcagttttgcagacatcaaactaacagaaattataaagatgaac
ataagtttagcccgatatgacagacccacaccagtccagaaatatgccctgcctttcatc
cttgccaaaagagatctgatggcctgtgcccagactggttcaggaaaaactgctgctttc
ttggtcccaatccttaaccaaatctatgaacagggtccagttcaggttaagaacaataac
cctcgtggccgtagtaagcagttccctctagctctcgtcttagcccctacccgagagttg
gcgacccaaatatacgacgagtcccgcaaattttcatacagggctcgagtacgaccatgt
gttgtgtatggtggtgcagatgtggtctctcagatgagggacttgtctcgtggctgccac
ctactcgttgctacacccggccgtcttgctgatatgattgaccgtggcaagattgggctg
gactcctgcaaatacctggtacttgacgaggctgaccgcatgctggacatgggttttgag
cctcagatccgtcgaattgtagaggaggacaacatgcctcccactggccagcgccagaca
ctcatgttctccgctaccttccctaaagaaatacagcgtcttgcccaggatttcttggac
aattacattttcttggcagtaggccgtgtcgggtcaacgtcagagaacatcacgcagaag
atagtctgggtggcagaggaagacaagcgatccttcctattagacatcctcaatgctgcc
ggccttgaccgtctaaatgaagccactaaggatgaaaaattggccatgggtgtaccccct
cagaaagaagaatcactgaccttagtgtttgtggaaaccaagaaaggggcggatgctctt
gaagagttcttgtaccgccatggctacccagtgaccagcattcacggggaccgcagccag
cgtgagcgtgaagatgccctccgcgtgttccgctctggccagtgtcccatactggtggcc
actgcagttgctgcccgtggtttagacattccacacgttaaacacgtcataaattttgac
cttccatctgacatagaagaatatgttcaccgtattggtcgtactggccgtatgggcaac
cttggtcttgccacgagcttcttcaacgacaaaaaccgcaatatggttcgtgacttggtg
gagctgttgcaagaggccaagcaggagttgcccaagtggctggaggccattgcttcagag
acgcgctggggcggtggcggcagcgcaagaggacgcagcggaggaaagagattcggtggt
gggtttggctctcgcgattaccgtcaagcggatcgcaccaagggcccccacacgtcgggt
cctgctcgccctggtggaggtttcaacagcttcgggggagttaacatttcagctccacca
cacttcaaccattatggaggatacggaggtttcagcggaggcggcggaggtggctacaac
agctataatacttcaggtgcctccggaacagactggtggggaaactga
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integrated database retrieval system
