Homarus americanus (American lobster): 121873049
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Entry
121873049 CDS
T07477
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121873049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121873049
Enzymes [BR:
hame01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
121873049
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121873049
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121873049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_Zer-1
LRR_6
Motif
Other DBs
NCBI-GeneID:
121873049
NCBI-ProteinID:
XP_042232298
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MSRTPKEGKESKPHRVRSHTIMGQEEFGSGKKSYWPELEITGNIRNISPAVWSLQHLTSL
YLNDNCLSRIPAEIARLEHLMYLDLSCNKIRSLPAEIGELTRLRELLLNNNQLRVLPYEI
GKLFNLQNIGLKGNPLTMEIQAVYSESNGTLKLLSYMLDNLAGKDKIGVVICSLYYVDKL
QSPEAVRLGYESCGKSDGENDRRMEINRMKFGFMLGNYVILARLEKLNTGDMYLGCVDVF
HYQGDLISVGGGAEVFSITRVRCGWKKFKVVASFIKIKRTFSTKKGEKYASSFDRCDVYL
YGSKIWQVKEDDIHRLD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaactcccaaggaaggaaaggaatcaaaaccgcaccgggtgcggtcacacacc
attatgggtcaagaagagtttggctctggcaaaaagtcttactggccagaacttgagata
acaggaaatattcgaaacataagtccagctgtatggtccttgcagcacctaacatctctg
tacctgaatgacaactgtctgtctcgcattcctgctgaaattgcccgactggaacatctt
atgtatcttgatttatcttgcaacaaaatccgcagcctcccagctgaaataggcgaatta
acacgtctcagggaactgctgctcaacaataaccaattgcgtgttttgccttatgaaata
ggcaagcttttcaatctgcaaaatattggcctaaaaggcaaccctcttacaatggagatt
caagctgtctactcagagtccaatggtacactaaagcttctctcttacatgctcgacaat
ttagcaggtaaggacaaaattggtgtagttatttgttcattatattatgttgataaactg
cagagtcctgaagctgttagattaggttatgaaagttgtggaaagagtgatggagaaaat
gataggagaatggagattaacagaatgaagtttgggttcatgctaggtaattatgtgatc
ttagctaggctggagaaactcaacactggggatatgtacttgggttgcgttgatgtgttc
cattaccagggtgacttgatcagtgttggaggcggtgctgaagttttctcaattacaaga
gtcagatgtggctggaagaagtttaaggtcgttgcttcctttattaagatcaagaggacg
ttctccacaaagaaaggagagaagtatgcatctagctttgacaggtgtgatgtatatttg
tatggtagtaaaatatggcaagttaaagaggatgacatacacaggcttgattga
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