Homarus americanus (American lobster): 121873059
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Entry
121873059 CDS
T07477
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC121873059
KO
K04988
polycystin 1L2
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hame04040
]
121873059
04091 Lectins [BR:
hame04091
]
121873059
Ion channels [BR:
hame04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121873059
Lectins [BR:
hame04091
]
C-Type lectins
Others
121873059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
REJ
Polycystin_dom
Ion_trans
PLAT
PKD
ChitinaseA_N
GLV1-2
GPS
COX2_TM
Motif
Other DBs
NCBI-GeneID:
121873059
NCBI-ProteinID:
XP_042232308
LinkDB
All DBs
Position
Unknown
AA seq
2552 aa
AA seq
DB search
MSHNSSCLSLHFRLLVSVEVREHEVVGIDFEIECLTASSIPTGDVPTPYTADTAQYSLIG
DYDLIYTITSDLLGGVSAWTSTASVICQEIITAPVLVAELWVPLLINTSFVISFNQGAPV
FSELNIGPEVKYTYYDNATNIDWDVNLYYTATGTYNLTGNASNLVSWVLYTSLVHVVPVL
TDNWQATTNCPCLNVSQGFNLIIDLPEAPNPPFTANITAMYSSGDLFPAQSLDFGTSAGG
GVAEALSEMFHTIILVPGNYTLTFVLRNEVSNTTFTTWVLVEEGLADVVGTPRFILDGIL
TEGMGENKNSFMYNTTIYFLPSALRGLPSVERWNLTLSTGEVLDITDTASENLTYVFVEE
GTYTLLVSGCNAVQGCISSDPIIVVILTDLEGFELHDDGSIIEPNITKIINATFTVLPPV
SCVLATYGDNSPYETYGYEKMCSEKYPNATYMGGHSNPLILKHTYREEGIYMVRAVASDS
KVSKTNDLQVVIASLPCNMPVVTIVKKMMDYTNAPKNWRSLSYVQSATAQINCSHSVPVS
RWWKVLKVKRDTGEPEETINIEGVLPSWNFSQLDITPLFLQVGVYKLSYTIRLNASKIFP
LQREDYTYIEIIPSPIRAVMMEGSVFSVSRGYSQFLLLQPGKLSSDPDAPNEKDFNITWW
CRQLKPTQETFNIVDDNDLKVYNIHPVPAPGTTDERTKEGCFGRGPGTLEYSDGTLNLQT
SSFIREQGTYEITALVSKDTRKQYTTVQVEVMQHPPPQLNVKCVEEKLCLPYNGGLLVNP
SSRLALMGNCVDMCEGEMKLEWTIMNMTGDPVNETDPGPDFCKPEECKPVFITTKAERNL
AVNPIFFSINKNIEKFRFRLTMTSSTESRGFAEIVVIPNKPPIDGTCKLRTETVRALLDS
TLTSCSDWKDPEKMGIVSYSFYYREENAEKTMVSSGFANVNLVFPVGYFEIRCKIQDKFG
SFTSVFVGNVNATMISEADFKAYNPSSVLQNLAAIGDQATLGMVLVGISSIRENADWLSL
DSLDSLESFEGEANDKLTQVSAMNKESLSFASSTMDFASLSQLNVGACVLKSSSCGILTQ
EMAAFTVDMEFRDMSIQFMKKMAAKLNTTPIYSPYDLQPFVSCFLDASVCILRSMNEIIL
NPDRSPPTDLKEAKDWNYETVIDGKDYNVEVPEDRITQLKKNVHATTISRAKSMLMEMFE
LIDFLCINILSKSVVGEVINEKSESGAGIFVAKYNEKSLSDGLQIDPKNALNASVTFPSS
FCPSKSSVKDAKCDNIFGVAVVVWPCLTHVYPESMKFLTPESFVLSIKLFIEERHIQVKN
LTAPILLAIPRTYKQLPKPVLTVAKTYINRHVPFVYHQFNVSNNNSAFTVDITPKEDIPP
NLVILIDHKRLPTPSQYDKILFVRDLPLNDNGSYSWFVNSQKNRNRIGFYLAVAILKKEL
DLSQNLSLKNKDFHNKFDFDYEILVTSSGCYYYDTQKSAWQGSDLECVAATDTHVYCNAH
HLTPFGSGHFHVENKIDFEYIYANLGFTSNITIYLMVIITLVCYILTMIWARFMDKKDVE
HRGVLPLENNSLEDKYLYEITLTTGPDKEAGTNSXIQFILSGEYDETDIRVLPPSEGRRY
HRYSVDTFVMSTRGPLGDIYLLXWRLVTQVLTNWQLETVVIRDLSTRNKYVFQANTWLAL
DRGSQKIDLLLKPSQSESDDTSFSTNSLSVWYQTLSDSPRISLFEIASAEQALIGIVSGL
LVYLLILLLVFVFKRARPRKLKKCRALEAIAKQRRGQQEQNEVEADKEDEVLNEYDQMPL
QSSDNRGKEASPVKCIPWWTRWLAWLIILVGIVVSIFFVWSYGIMWGEIKTMKWFSSYVI
SFISLLISQWLKVLFITTCGTICCKNMNSTTEDIDCDEELPELKYDEEWKNTKQMDPFIK
RKVHRIGGVDSNEPEVGALVTRLTKDREMSYLVRDIGIYCLFLLVLFILANGQADINAFL
LQDHLTRTFIKIGHRDLDFSSKIITSDHFWFWSQTVILTEMRAQRWYNNEPPYGLKGYLG
DRVNRIMGYGILRQIRSDPRTCVPFSKIRKTIKRCSGRRSWDPEETRNFCDGWSALETSK
SSCQREEFRYKTAAEFETYSMEGKLGYYSGGGYEIKLNGPQEDDLNKLKKLQKLRWIDKY
TRAVMLEFSVFNVNVNLFSTCTIIAEFNEGGGITPKWRFEPVRLLPHTGPFGYLVSICEI
AFIIATVLFTLIEIWKVKKLKCKYFMSYWNLAEVCILLISYISIFVFVYRHILTQDALKK
FIDTQGNGYVRIDSAAQMDKVYLYLLSAIVFFSILKLIKLLQFNKRMDVLALTIGLCWDE
LKVFFIGFGIVFFAFCCLFYFMFLTAIEDFARFIPAIETSFKMMLGKFDFAAMNRANPYS
PILFFVFSVLNSMILINIMLTIILSAFNEVKFDLENKENKYNVIDFVWSTVRQTLKLEKS
PDDSVTPNIMDIKTKKISPNYSNTEELPDKVSQLMKYISDVYFEGNINLNDPSAVKQIIQ
GQLPSASLHRPSFQPQRSRLMSGGQKPVISSD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcataattcttcctgtctgtctcttcacttcagattattagtgagtgtggaggtg
cgtgaacatgaggtggtgggcatagattttgagattgagtgtttaactgcttcatcaata
cccactggtgacgtgcccaccccttacactgctgacactgcccagtactctctgatagga
gactacgatctcatctacacgattacaagtgatctgctgggcggggtaagtgcctggacc
agtacagcctcagtaatatgtcaagaaattattactgcaccggtgttagtagcagaattg
tgggttcccctcctcattaacaccagctttgtgatctccttcaaccagggtgccccagtc
ttctcagagttgaacataggaccggaggtcaaatacacttactatgacaatgcaacaaat
attgactgggatgtaaatttgtactacactgcaacaggaacctataacctgacaggcaat
gcttctaatcttgtcagctgggtactgtacaccagcctggtgcatgtggtacctgtgctg
accgacaattggcaagcaactacaaattgcccctgtctaaatgttagtcaagggtttaac
ctcatcatagacctaccagaagccccaaatccaccattcacagcaaacatcaccgccatg
tactccagtggagatcttttccctgcacagagcctggacttcggtacctctgctggtgga
ggggtggctgaggctctcagtgagatgttccacacaataatcctggtgccaggcaactat
accttaacgtttgtcctcaggaatgaggtgtccaacactacattcaccacctgggtgctg
gtggaggagggattggcagatgtcgtgggaactcctagatttatattggatggtatcttg
actgagggtatgggtgaaaacaagaattccttcatgtacaacaccaccatctacttccta
ccatctgccttgagaggtttaccatctgtagaacggtggaatttaacgttgtccactggg
gaggtgttggatataacggatactgcaagtgaaaaccttacttacgtgtttgtggaggaa
ggaacatacactctactggtatcgggctgcaacgctgtgcaagggtgcatctcttctgac
cccatcatagtcgtaatcttaacagatttagaaggttttgaactgcatgatgacggaagt
atcattgaaccgaacatcacgaagataataaatgcaacattcactgtattgccaccagtg
tcatgtgtgttggcaacatatggtgacaatagcccatatgaaacgtatggatatgagaaa
atgtgcagtgagaagtatccaaacgctacctatatgggtggacattctaacccactcatt
cttaaacatacatacagggaggaaggaatatacatggtgagagctgtcgcctctgattca
aaagtttcaaaaactaatgacttacaggtagtgattgcatcgttaccttgcaatatgccg
gtggttactatagtaaaaaagatgatggattacaccaacgcaccaaaaaattggcggtcc
ttatcatatgtacaatctgcaacagcacaaattaattgcagccatagtgtgcctgtgagc
cgctggtggaaggtgttgaaagtgaaaagggatactggagagccagaagaaaccatcaac
attgaaggcgtactcccctcctggaatttttcccagctggacatcacgcccctcttcctc
caagtaggagtctacaagctctcatacaccatcagattgaatgcctccaaaatctttcca
cttcagagggaggattacacctacattgagataattccatctcccattagagcagtgatg
atggaggggtcggtgttcagcgtgagtcgtggctattctcaatttttgttactgcaaccc
ggcaagttgtcaagtgacccggatgccccgaatgaaaaggactttaatatcacatggtgg
tgtcgacaactgaagccaacacaagaaacctttaacattgtggatgataatgacctgaag
gtgtacaacatacatcctgtgccggctccaggtaccactgatgagcgcactaaagaggga
tgcttcggcagaggtccaggcacacttgagtacagtgatggcactttaaacctgcaaacc
tcaagtttcatacgtgaacaaggcacatacgagatcactgctctcgtcagcaaggataca
cgaaagcaatacactacagtgcaggtggaggtcatgcagcatcctccaccccagttaaat
gtaaaatgtgtggaagaaaaactgtgtttaccttacaatggcggactccttgtcaatcca
tcttctcgtctggcacttatgggcaactgtgtggatatgtgtgagggtgagatgaaactt
gagtggaccattatgaacatgacaggggacccggtgaatgagacagacccaggtcccgac
ttctgtaaacctgaagagtgtaaaccagtgtttatcacgacaaaggctgaaaggaacctt
gctgtcaacccaattttcttctccatcaacaaaaatatagagaagttccgcttcagactc
acaatgacaagttcaactgaatctagagggtttgcagagatcgtggtgatcccaaacaag
ccaccaattgatgggacatgcaagttaagaactgaaactgtacgagcactgttagattct
acactcacatcatgctctgactggaaagacccagagaaaatgggaattgtgtcatattcc
ttctattatcgtgaagaaaatgccgagaaaacaatggtgtcatcaggctttgctaatgta
aatttggtcttccctgtgggctattttgaaattagatgtaagattcaagataagtttgga
agtttcacctctgtgtttgttgggaatgtgaatgctacaatgatttcagaggcagatttc
aaagcatacaatccttccagtgtcctacaaaacttagcggccattggtgatcaagccaca
ttaggaatggtgttagtggggatctcttctattagagagaatgctgattggctgtcatta
gattctttagattcccttgagtcattcgagggagaagcaaatgacaagctaactcaagtt
agtgccatgaataaagaatcactttcttttgcttccagtacaatggactttgcctcatta
tctcagctcaacgttggtgcttgtgtcttgaaatcatcttcttgtggcatcctaacacaa
gaaatggcagcatttacagttgatatggaatttagggatatgagtattcaatttatgaag
aaaatggcagccaagttaaataccactcctatttattctccatatgatttacaacctttt
gtttcatgttttttggatgctagtgtttgcattctaaggagtatgaatgaaattatattg
aatccagataggagtcctcctacggatttgaaggaagccaaggattggaactatgaaact
gttattgatggcaaagactataatgttgaggtaccagaagacaggataactcaactaaag
aaaaatgtacatgcgactacaatatcaagagcaaagagtatgctgatggaaatgtttgaa
ctgattgattttctttgcattaacatcttatcaaagagtgttgttggggaggtgatcaat
gaaaagtcagaaagtggggcaggaatttttgttgccaaatataatgaaaaatcgttaagt
gatgggttgcaaattgaccctaagaatgccttgaatgcttcagtgacattcccaagttct
ttctgcccttctaagtcaagtgttaaagacgcaaaatgtgacaatatctttggtgtggca
gtagtggtgtggccatgtttaactcatgtgtatccagagagtatgaaatttctcacacca
gaatcttttgtactctccatcaagctatttatagaagaaaggcatatccaggttaaaaat
cttactgccccgatcttactggcaattcctcgaacatataagcagttaccaaaaccagtt
ctcacggtggcaaaaacctatatcaacagacatgtaccctttgtgtaccatcagtttaat
gtgtccaataataattctgccttcactgtggatattacaccaaaagaagacatcccacca
aacttggttattttaatagatcacaagagattaccaaccccttcacaatatgacaaaatt
ttatttgtgagggacctcccattaaatgataatggatcatattcttggtttgtgaatagc
cagaaaaatagaaacagaattggattttatctcgcagtagccattctaaaaaaggaactt
gacttaagtcaaaacttaagtctgaaaaacaaggatttccataataaatttgattttgat
tacgagatccttgtgacaagttcaggatgttattactatgatacacaaaagagtgcctgg
caaggctctgatctggagtgtgtggcagctacagatactcacgtttattgtaatgcacat
catttaacaccctttgggtcagggcactttcatgttgaaaataaaattgactttgaatat
atttatgctaatttgggttttactagcaatattacaatatatttaatggtcataattaca
cttgtttgttatatattaacaatgatatgggctcgttttatggataagaaagatgtagaa
cacagaggagttcttcccttagagaataatagtttggaagataaatatctatatgaaata
actcttactactgggcctgacaaagaagctggaacaaattcanncatccagttcatatta
tcaggagaatatgatgaaacagatataagagttcttccaccatctgaaggcagacgttat
caccgttatagtgttgatacatttgtgatgagcacacgagggcccctgggagatatttac
ttacttngatggcggctagtgacacaggtacttaccaattggcagctggagacagtagtg
atccgtgatctttcgacacgaaataaatacgtgttccaggcaaacacttggttagcttta
gaccgtggtagccagaaaattgacctgttactgaagccatcacagagtgagtctgatgac
acatcattcagtacaaattcactatctgtgtggtaccagacactcagcgattcacctcgc
ataagtttatttgaaattgcttccgcagaacaggcccttattggtatcgtttcaggttta
ctggtgtatctcttgattctccttcttgtgtttgtattcaaaagagctagacctcgaaaa
ctcaaaaaatgccgtgctcttgaggctatagccaaacaacggaggggccagcaagaacag
aatgaagtagaggcagacaaagaagatgaggtcttgaatgaatatgaccaaatgcccctt
cagtcatcagacaaccgaggcaaagaagcaagtcctgttaagtgcattccatggtggacg
agatggctggcctggctcataatactggttggtatagtcgtgtccatattttttgtatgg
tcatatggaattatgtggggagagatcaaaactatgaagtggttctcctcttacgtcatc
tccttcatctctctccttattagtcaatggctgaaggtgctatttataaccacatgtgga
accatttgctgcaaaaacatgaactctactacagaagacatagactgtgatgaagagttg
ccagaactcaagtatgatgaggaatggaagaatactaaacaaatggaccccttcatcaaa
cgcaaggtgcatcgcattggaggagtggactcaaatgaaccagaagttggtgcgttagtc
acccgtcttacaaaggacagagagatgagctatttagtacgagacattggcatatattgt
ttattcttgctagttctcttcatacttgcaaatggacaagcagacatcaatgcctttctg
ctgcaggaccacttgactcgaacattcatcaagattggacacagagatttagatttcagt
tctaagatcattacatctgaccacttctggttttggtcacagacggtgatcctgactgag
atgcgtgctcagcgatggtacaacaatgagcccccgtatggccttaaagggtatttagga
gatcgagttaacaggattatgggttatgggatactgcgtcaaataagaagtgatccacga
acttgtgtacctttctccaaaataagaaagactataaagcgctgctcaggaagaagaagt
tgggaccctgaggaaacgagaaatttctgtgatggatggtcggctctagaaacttcgaag
agttcatgtcagcgtgaagagttccgctataaaactgctgccgaatttgagacttattcc
atggaaggcaaacttggttactatagtggtggcggctatgaaattaaattgaatggaccc
caagaagatgacttgaataaactcaagaaattgcaaaagttgagatggattgacaaatac
acacgtgcagtgatgttagagttttcagtctttaatgtaaatgttaaccttttttccact
tgtactattattgcagagtttaatgaaggtggaggcattacccctaaatggaggtttgag
cctgtgcgactcttgccacatacaggaccttttggttatcttgtgagcatatgtgaaata
gcttttataattgctactgtcctgtttacattgattgagatctggaaggtaaaaaaactt
aaatgtaaatattttatgtcatattggaaccttgccgaagtctgcatccttcttatatct
tacatttcaatttttgtttttgtgtacagacatatcttgacccaagatgctctgaaaaaa
tttattgatacacaaggcaatggttatgtgagaattgactctgcagctcaaatggataaa
gtttacctctacctgctatctgctatagtgtttttctcaatactaaaacttataaaatta
ctccagttcaacaagaggatggatgtgctggcccttacaattgggctatgctgggatgaa
ctcaaagtgttcttcataggatttggtattgtgttttttgccttctgttgtctgttttac
tttatgttcctcacagctatagaagactttgctaggtttatacctgcgattgaaacaagc
ttcaaaatgatgttgggtaagtttgattttgctgcaatgaatcgagccaacccatattct
ccaattctcttttttgtgttctcagttttgaatagtatgattctcatcaacattatgctc
acaattatcctctcagctttcaatgaagtcaagtttgatttggaaaataaggaaaataag
tacaatgtcattgactttgtgtggtctacagtgcgtcaaaccttgaagttggaaaagtca
ccagatgacagcgtgactccaaacatcatggatataaaaactaagaaaatcagtcctaat
tactctaacactgaagaactccctgataaggtgagtcagttgatgaaatacatcagtgat
gtttatttcgagggcaacattaatctgaatgacccatcagcagtgaaacaaatcattcaa
ggccaactaccctctgcctctcttcatcgtccatctttccaaccacaaagaagcagattg
atgagtggtggccagaaacctgtcatctctagtgactga
DBGET
integrated database retrieval system
