Homarus americanus (American lobster): 121873487
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Entry
121873487 CDS
T07477
Name
(RefSeq) transcription factor Sox-1a-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hame03000
]
121873487
Transcription factors [BR:
hame03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121873487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121873487
NCBI-ProteinID:
XP_042233012
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MYPTMMESMPVSYASTMGGMMGHYFGGGSAGMGVGAGIGQIPPAHHSNALAQQQPPQQPP
PQQESGHPHQQASHTPHAPAQNTPETLTASHAHLRQAALVTPVSTPSPADSTASGCSPSG
SAQKKENGSKDDHVKRPMNAFMVWSRMQRRKIAQENPKMHNSEISKRLGAEWKTLTEAEK
RPFIDEAKRLRAQHMKDHPDYKYRPRRKPKTLKKDGYPYSIPYPTVSMDPLRGGFPSQLS
PYYSASAAAANYGSITAAHMAAAAAAAAAAQQQLTTQASQVSPVGYGYDASKYTSYMTGA
AGYPMSMYGSAAAAAATDQKYGDTSKVAAAAAASAAVGGYEAAKSYLDSSKYLSDKYGLE
KPTSYLDKLAQDPKDAEMKSASPGISSVNPGPMAGYGSAAGALSNYYSQAASTSAFQPSG
ALSQGVPSTMASLLQPSQVASYTNAQYPPVGADYRRPLSVIF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctaccatgatggagtcgatgccggtgtcgtatgccagcacaatgggtggtatg
atgggtcactacttcggtggagggagtgcgggcatgggtgtgggtgcaggcattggccag
attcctcctgcccaccacagcaatgccctggcccagcagcagccaccccagcagcctcct
ccgcagcaggagagcggccatccccaccagcaggcgtcccacaccccccacgcgcctgcg
cagaacaccccagagacactaacagcgagtcacgctcatctccgccaggcagctctggtg
acgcccgtctctaccccatcaccagctgattctaccgcctccggctgctcccccagcgga
tcagcccagaagaaggagaacggcagcaaggatgatcacgtgaagcgccccatgaacgcc
ttcatggtgtggtcccgcatgcagcgccgcaagatagctcaagagaaccccaagatgcac
aactctgagatctccaagcgtctcggagctgagtggaagacgctgacggaggctgagaaa
cgtcccttcatcgacgaggccaaacgtctccgggcccaacacatgaaggatcacccagac
tacaagtaccgtccccgcaggaagcccaagaccctgaagaaggacggttacccctacagt
atcccctaccccaccgtctccatggatcctctccgcggagggttcccttctcagctctcg
ccgtattactccgccagcgccgccgcagccaactacggttccatcactgcggcacacatg
gccgccgcagctgccgccgccgccgccgctcagcagcaactcaccacacaggcgtcacag
gttagccccgtcggttacggctacgacgcctccaagtacaccagctacatgaccggggcc
gcaggctaccccatgagtatgtacgggtcagccgccgcagccgccgccacagaccaaaaa
tatggtgacaccagcaaggtcgccgccgccgctgccgcctcagccgccgtcggaggatac
gaagccgccaaatcgtatttggacagcagcaaatatctctccgacaagtacggcctggag
aaacccacctcatacctggataagttggcacaggatcccaaagacgccgagatgaagagc
gcgtcacctggcatcagcagtgtcaacccgggacccatggctggctacggctcggctgcc
ggcgccctcagcaactactacagtcaggctgccagtacctcagccttccagccctctgga
gctctgagtcagggcgtcccctctaccatggccagcctcctgcagccatcccaggtggcc
tcctacactaacgcgcagtacccgcctgtaggagccgactaccggaggccactgtcagtc
atcttctag
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