Homarus americanus (American lobster): 121873693
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Entry
121873693 CDS
T07477
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121873693
03036 Chromosome and associated proteins [BR:
hame03036
]
121873693
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121873693
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121873693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
HHH_9
S1
HHH_3
Spt6_S1
Tex_YqgF
Tex_N
SH2
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
121873693
NCBI-ProteinID:
XP_042233326
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MSHFIDSEAEESEEEEEEYEESEKKKLKKLKTAIADSSEEDDEDDEEKIREENKDFINDD
EEEEEEGGSGSDSDMERKRKRRHDYDDDDLEADNLDEDDLDLIEENIGVKLDRKKKFKRL
KRIVDEDSDAEADDVQGQIRKEIFEGSDDEEDDGASIPHPPQQPETYASEEEEELSDGEE
NFIVDDEGKPIARQKRKAVFEDEGLEAARDIFGCDFDYGEFEQYEGWEEGEEEEDDDDDY
EEDEDGGEGKEHRRGRKERRKQIKKSIYEVFEPSELERGHLTDQDHEIRKLDIPERFQLR
QIPVTRTRGEGDDRSTDKELDHEAKWIYHHAFFRPFISNQEGREEARQRSRRDVNMIQKI
YNALDLMRNSTCEVPFIAFYRKEEVQPELNIHDLWKVYHWDEKWCQLKHRKENLRARFQM
MGEFQGDLIMKDLDAPLPENMRMLKEEDIERIEEIETSEQFNDYYKFFLLYYGKEQPSMR
EHMKAKRKEHRTITKVTSVVKVMRKVMRKKKKKKKNHLVIEDDDEDEDRPKDNETEKDKD
DESVKDADSVIEKDKKGDAEKDKQVDAEKDKDGDDSDMDDVTDIGMDVDDGEKDKSDEEK
EKSDEEKEKSDDEKEKSDDEKEKSDDEKEKSDDEKEKSDDGAEKKSDDGAEKEKSDVGAE
KEKSDDEGEEKDKSDDDEKEKTKESAKKGKEVEEMGMEIEKDREEGQKDKEDKEEEKEKA
RSDDDDDDDDDDEEEVETEVETEIEEEVEEENKVPEEDAEALKKAVRRHEYELLRRAGIE
SLTKKFGLTPEQFGENLRDNYQRFDVEQCPEDPMKEAEEFQSKMCSTPERVLEAAVRMVG
WQLACEPLVRRTVREAYFERARIGARPTPQGVKIIDEHHPIYAIKYLKDKPVTDLQGDQF
LRLKCGVEDKLMTISLSDTIDGNTTISYLDEMKQLYYRDEFSQVVQDWNDLRGRAVTFAF
KRIIEDLKRELSQRLLREAKDHVTEQCCSKLYNWIKIAPYNPGDFTDEDEDDWDTIKGFR
VFSIAFVPDLSQAAFGCCIDIDGDCCEYIRLPHLLKRRNAYNERDAMAKENDIRRMQDFI
FRRKPHVIAVSGESREAIMVKEDLIQILKDLEEQEQFPKINVEIIDNDLAHIYSMSKKGE
ADFLDYPSLLRQAVSLGRRVQDPLVEFSQLCNSDEELLNIKFHSLQDQLNTTELLDALYT
EFVNRTNEVGVDLNRAVAYPYTQNLVQFVCGLGPRKANLLIKTMKQNNHRLENRNQLVVN
FHMGPKVFINCAGFIKIDTNALGDSDNYIEVLDSTRIHPEAYDWARKMAVDALEYEDEEG
KPAEALEEILETPERLSELDLEAFATELQNQGFGKKNTTLYDIRHELNHRYKDFRLPFRS
PSPEETFNILTKESPETFYVGKLVQVSVTNFIHRKPRGDQLDNANPVRNEDTGLWQCPFC
LKNDFPELSEVWNHFDAGDCPGQAIGIRVRLDNGISGFISIKNLSDKTVTNPAERVRRDG
LVLCRIMKIDPEKFSVELTSRTSDLQDRDNKWKVPKDPYYDPDSEEKDMNVDKKKKEKKK
TQYQKRVIAHPSFRNIDYNEAEKVMQQLEQGEVIIRPSSKGNNHLTATWKVTDGICQHID
ILEQDKQNDFSLGQKLWIGSEEFEDLDEIIARYVSPMASNVRQILEYKYFKESIMGNKEK
AAEFLKEEKKKNPKTIPYIFSPRKDLPGKFLLSYLPRVKVIHEFVTITPEGFKFRQRMQY
PNLAGLLKWFKQNFRRAVPNVTPGMMSARTPYMGGTTPNLMGVDASTIQKVAQNLNPHML
HNLSQAATNTPYGAHTPGAFSQGYSNYANTPYTPSGQTPFMTPYATPGPSTTPRYSGSQT
PVYGSSGNRTPSHRSSSGHSAQPSRSAPPVSSRSEQMDWKMAAAAWVQAKGGSSGHDSGR
MTPRHHDGGRSTPRYSDSRDSRYPSSPRYPDDGSRRTPRYDDRTPRPYHDYDNPRTTPRS
ARSTPKTIHSPANMSIGGDQTPLYDE
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatttcatcgactcggaggcagaggagagtgaggaggaggaagaagagtatgaa
gaaagtgaaaagaagaaactgaagaagcttaagactgccatagctgattcgtcggaagaa
gatgatgaagatgatgaagaaaagatccgagaagaaaacaaagactttattaatgacgat
gaagaagaggaagaggaagggggctcagggtcggacagtgacatggagcgtaagagaaaa
cgccgtcacgattacgacgacgacgacctggaagctgacaacctcgatgaagacgacctc
gacctcattgaagagaacattggtgtaaagcttgacaggaagaaaaagttcaagcgtctg
aagagaatcgtggacgaggactccgacgcagaagcagatgacgtccagggccagataaga
aaagagatcttcgagggttctgatgatgaggaagatgacggggcctccataccacaccct
ccacagcagcctgaaacttacgcctcggaggaagaagaggaattatctgatggcgaagag
aactttattgtcgacgatgaaggcaaacccatcgccaggcagaagaggaaggccgtgttt
gaggacgagggactggaagccgctcgtgatatcttcggttgtgatttcgattatggggag
ttcgagcaatatgaaggctgggaagaaggtgaggaagaggaggacgatgatgatgattac
gaggaagacgaagacggtggagaaggaaaagaacatcgtcgtggccgcaaggaacgcagg
aaacaaatcaagaagtctatctatgaggtgtttgaacctagtgagttggagcgcgggcat
cttacagatcaagatcacgaaatccgcaagttggatattcccgagaggttccagctccgg
cagatacccgtgacgcgtacccgaggcgagggtgacgaccgctctactgataaggagttg
gatcacgaggccaagtggatataccatcatgcattcttcaggccatttatatccaatcag
gaggggcgcgaggaggcgcggcagcgttctcggcgtgacgtcaacatgatccagaagatc
tacaatgccctggacctgatgaggaactctacatgtgaggtcccattcattgccttttac
aggaaggaagaggtccagcctgaactgaatattcatgatttatggaaagtctatcactgg
gatgagaagtggtgtcaactgaagcaccgtaaagaaaacttgcgggccagattccagatg
atgggagaattccagggagaccttatcatgaaggacctagatgctccacttccagaaaat
atgcgcatgcttaaggaagaagacattgaaaggattgaagagatcgagacttcagaacaa
ttcaacgattactacaagttcttcctgctgtactatggcaaagaacagccatcgatgaga
gagcacatgaaggccaagcgcaaggagcacaggaccataacaaaagtcaccagcgttgtt
aaggtcatgagaaaggttatgagaaagaagaaaaagaagaagaagaatcatctcgtcatc
gaggacgacgacgaggacgaagacaggcccaaggataacgagacggagaaagacaaggac
gatgaatcggtgaaggacgcggatagtgtgatagagaaagacaaaaagggcgacgctgag
aaagacaaacaggtggacgctgagaaagacaaggatggcgacgatagtgacatggatgat
gttactgatataggcatggatgttgatgatggtgagaaggacaagagtgatgaagagaag
gagaagagtgatgaagagaaggagaagagtgatgatgagaaggagaagagtgatgatgag
aaggagaagagtgatgatgagaaggagaagagtgatgatgagaaggagaagagtgatgat
ggtgctgagaagaagagtgatgatggtgctgagaaggagaagagtgatgttggcgctgag
aaggagaagagtgatgatgaaggagaagaaaaggacaagagtgatgatgatgagaaggag
aagactaaggaaagtgctaagaaaggtaaagaggttgaagagatgggtatggaaatagaa
aaagatagagaggaaggacagaaagacaaagaggataaggaagaagagaaagagaaagca
aggagtgatgacgatgacgacgacgatgatgatgatgaggaagaggtagagacagaagtg
gaaacagagatagaggaagaggtagaagaagagaataaggtacctgaagaagacgcagag
gccttgaagaaagctgtacggaggcacgagtacgaactgctgaggagagctggcattgag
tcactcacaaagaagtttggtctgacacctgagcagtttggtgagaatttgagggataac
tatcagaggtttgacgttgagcagtgcccagaggacccaatgaaggaggctgaggagttc
caatctaaaatgtgcagcaccccagagcgtgtacttgaagcagctgtgagaatggttggt
tggcagttagcctgcgaacctctggtacgccgtacagttcgtgaggcgtactttgaacgt
gctagaatcggtgccaggcccacaccacagggcgtgaagatcattgatgaacatcatcca
atttatgccattaaatacctgaaggataagccagtcacagatctgcaaggcgaccagttc
ctacgtctcaaatgtggagttgaggacaagctgatgacaattagcttgtctgacaccatc
gacgggaataccacaattagttaccttgatgagatgaaacagctgtattatagggatgaa
ttttcacaagttgttcaggattggaatgatttgagaggcagagctgtaacttttgccttc
aaacgaattatcgaagatttaaaaagagaactgtctcaacgtttgctccgggaggctaaa
gaccatgtgacagaacagtgttgtagtaagctttataactggataaaaattgcaccttat
aatcctggtgactttactgatgaggatgaggacgactgggacacaataaaaggttttaga
gtcttttccatcgcctttgttccagacctttctcaagctgcctttggttgttgcattgac
attgacggtgattgttgtgagtacattcgacttcctcacttgctcaaacggcgtaatgct
tacaacgagagagacgctatggccaaagagaacgacatcagacgcatgcaggacttcatc
tttcgtcgtaaaccgcacgtcatcgctgtcagtggagaatctcgggaggccatcatggtt
aaggaggacctgatccagatcctcaaagatctggaagaacaggaacagttccccaaaatt
aatgtagaaataattgataatgaccttgctcatatttactccatgtccaagaagggagaa
gcagacttcctagattacccttccctgttgagacaagccgtgtctcttgggcgccgcgtt
caggatccgctggttgaattctctcagctgtgtaattctgatgaggaattgctcaacatt
aaattccacagtttacaggatcagttaaatacaacagagttactcgatgctctgtatact
gaatttgttaaccgtacaaatgaggttggtgtggatcttaatcgtgctgtagcataccct
tatactcagaatttagttcaatttgtttgtggtttgggtcctcgaaaggccaatctcctc
ataaagactatgaaacaaaataatcaccgtttagaaaataggaatcaattggttgttaac
ttccacatggggccaaaagtcttcataaactgtgcgggcttcattaaaattgatactaat
gcattgggtgacagtgacaactacatagaagttttggactctaccagaattcatccagaa
gcttatgactgggccagaaaaatggctgttgatgctctggagtatgaggacgaagagggc
aaacctgcagaagctttggaagaaatcttagaaactcctgaaagactcagtgagcttgat
ttggaagcttttgcaacggaactacagaaccagggctttggtaagaagaacacaactttg
tatgatattagacacgaactcaaccatcgatacaaagatttcaggctgccattcaggtct
ccctctcctgaagaaacctttaacatactcaccaaggagtcaccagagaccttttatgtc
ggtaaacttgtccaggtttctgttactaactttattcatcgtaaaccccgcggagatcag
ctggataatgctaacccagtcagaaatgaagacactggactttggcagtgtccattttgt
ctcaagaatgattttcctgagctaagtgaggtgtggaatcattttgatgcaggggattgt
cccgggcaagccataggtattagagtgcggttggacaatggaatttcgggtttcatcagc
atcaagaacttatcagataaaactgtaaccaatccagctgagagagtgagaagagatggt
cttgtgctctgtcgtatcatgaagattgatcctgaaaagttttctgtggagctgacgtca
agaacatcggacctgcaagaccgagacaacaaatggaaagttcccaaagatccttattat
gatcccgatagtgaggagaaagacatgaacgtagataagaagaagaaagagaaaaagaag
acccagtatcagaaacgtgttattgcacacccctccttcaggaacattgattataatgaa
gcagaaaaggtgatgcagcagctagaacaaggcgaggtgatcattcggccctcaagtaaa
ggtaacaatcatctcactgccacttggaaggtcaccgatgggatctgtcagcatattgat
atactggaacaagacaaacaaaatgacttctctctcggtcagaagctctggattggaagt
gaggaatttgaagatttggatgaaatcattgccagatatgtgtcccccatggcaagtaat
gtgcgacaaatattagaatataaatattttaaggagtctatcatgggtaacaaggagaaa
gcagctgagtttctgaaggaggagaagaagaagaaccctaaaactatcccttatatcttt
tcacctagaaaggatttgcctggaaagttcctcttatcttatttaccaagagtgaaagtt
atccatgaatttgtaacgatcactcctgaaggcttcaaatttagacagagaatgcagtac
ccaaaccttgccggacttctcaaatggtttaaacagaatttccgtcgagccgtaccgaat
gtaacgccagggatgatgtctgcaagaacaccctacatgggtggcacaacacctaatctt
atgggtgttgatgcctccacaatccagaaggttgctcagaacctcaatccacacatgtta
cataatctctcccaggctgccactaacactccttacggtgcccacactcccggagcgttc
tctcaaggctattctaattatgccaatacgccttatacgccatcgggtcagacgccgttc
atgacgccgtatgccactcctggaccgtcgaccacgcctcgttacagcgggtcacagacc
ccagtgtacggcagtagtggtaacaggacgccatcgcacagatcttccagtggacactct
gcccagccctctcggtccgcgcccccggtcagtagtcgatccgagcagatggattggaag
atggcagcggctgcttgggtccaagcaaagggtggaagcagcggacacgacagtggaagg
atgactccgcgacaccacgacggcggccgctccactccgcggtattccgactcccgagac
tcgaggtacccgtctagtcccaggtatcccgacgacgggtctcgccgcacgccacgatac
gacgaccgcacgcctcgcccctaccacgattacgacaacccccgcaccacccctcgctcg
gctcgttctacgcccaagaccatccactctcccgctaatatgagtattggcggagaccaa
acgccactctatgacgagtag
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integrated database retrieval system
