Homarus americanus (American lobster): 121873821
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Entry
121873821 CDS
T07477
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03030
DNA replication
hame03410
Base excision repair
hame03420
Nucleotide excision repair
hame03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121873821
03410 Base excision repair
121873821
03420 Nucleotide excision repair
121873821
03430 Mismatch repair
121873821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hame03032
]
121873821
03036 Chromosome and associated proteins [BR:
hame03036
]
121873821
03400 DNA repair and recombination proteins [BR:
hame03400
]
121873821
DNA replication proteins [BR:
hame03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121873821
DNA Replication Termination Factors
ELG1-RFC complex
121873821
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121873821
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121873821
Check point factors
HRAD17(Rad24)-RFC complex
121873821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_24
AAA_11
AAA_assoc_2
RuvB_N
AAA_14
RCF1-5-like_lid
AAA_16
DUF815
ResIII
DEAD
AAA_5
AAA_7
AAA_30
Thioredoxin_6
PhoH
AAA_19
BrkDBD
Mg_chelatase
ATPase_2
ABC_tran
bpMoxR
Cas_NE0113
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
121873821
NCBI-ProteinID:
XP_042233488
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MGVEDDAKNQNLPWVEKYRPQTLQDLISHEDIISTIKRFIDEDHLPHLLFYGPPGTGKTS
TILACARKLYSPKEFNSMVLELNASDDRGIGVVRQQILNFASTRTIFKSGFKLVILDEAD
AMTNDAQNALRRVIEKFTDNVRFCLICNYLSKIIPAIQSRCTRFRFGPLASDQILPRLNY
VIDRENVTVSEDGRKALLSLSGGDMRRVLNILQSTAMAFKEVTEDNVYTCVGHPLRSDIT
NIINWMLNEPFDIAYKNVNTLKITKGFALQDILTELHAYVHRIDFPVEVRVYLVEQLSDV
EVRLCAGASEKLQLSSVLAAFTRAKHMVAAEASTYGV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgaagatgacgccaaaaatcaaaatttgccctgggtggaaaagtatcgacct
cagacccttcaagatttgatctcacatgaggacatcatctccacaattaaacggttcatt
gacgaggatcatctgccacacctgctcttctatggtccaccaggcacaggcaagacctcc
actatcctggcatgtgcccgtaaactttactctcccaaggagtttaattctatggtgttg
gaactgaatgcatcagatgaccgtggcattggtgtagtgcggcaacaaatacttaacttt
gccagtacacgtactatattcaagtccggattcaagcttgtcatcctagatgaggctgat
gccatgaccaatgatgcccaaaatgcattaaggagagtaattgaaaagtttacagacaat
gtacgcttttgtctcatctgcaattacctgagtaagatcatcccagccatacagtctcgg
tgcacacgattccgatttgggccactggcatcagaccagattcttccccgtctcaactac
gttattgatcgggaaaatgtcactgtctcagaagatgggagaaaggcattactgtctctc
tcaggtggggacatgaggcgagtattaaacatactacagtccacagcaatggctttcaaa
gaagtgacagaggacaacgtgtatacgtgcgtgggtcatcctctccgctcagacatcaca
aacatcataaattggatgttgaatgaaccctttgacattgcctacaaaaatgtaaacaca
ttaaagataacaaaaggttttgccctgcaagatattttgactgaactacatgcctatgtt
catagaattgacttcccagttgaagtgcgtgtgtaccttgtagagcagctgtctgatgta
gaggtgaggttgtgtgcaggtgcttcagaaaaactacaattatcttcagttttggcagca
tttacaagagccaaacatatggtagcagctgaggcatcaacatatggagtttga
DBGET
integrated database retrieval system
