Homarus americanus (American lobster): 121874969
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Entry
121874969 CDS
T07477
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121874969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121874969
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121874969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
SPRING1
Motif
Other DBs
NCBI-GeneID:
121874969
NCBI-ProteinID:
XP_042235253
LinkDB
All DBs
Position
Unknown
AA seq
212 aa
AA seq
DB search
MSKHACELNFLSRSDGSALYSIGNTVALASVNGPGEVKKFNRLYNRAYLEVSYSPSTGQS
MIGERALESVITRTVEQVILVHLHPRTAVNVTIQEMQSDGLELSTSVNAACLSLLDAGVQ
MKSTFAAVTCCLTPSSTILIEPTAAEMKESVAVATFVLDGQALNVLSAHQEGCLNAENFN
ACLKACQTAAKDVFNFYRQALEKKYHTCNEIS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacacgcttgtgagctaaatttcctctcccggtctgatggctctgcactttat
tctataggaaacacagtggctcttgcttcagtaaatggtccgggtgaagttaagaagttc
aaccgcctctacaacagggcatatctagaggtgtcctacagcccctccaccggacagtcc
atgataggagagcgagctttggagtcggtgatcacacgcacagttgaacaagtgattctt
gttcatcttcacccaagaactgcagttaatgtcaccatacaagagatgcagtcagatggt
ttggaactgtcaacaagtgtgaatgctgcctgtttgtcccttcttgatgctggagtacag
atgaagtcaacatttgcagctgtcacctgttgtctcacaccttcatccaccatcttaatt
gaacccacagcagctgagatgaaggaaagtgtggcagtagcaacatttgtactagatggc
caagcactgaatgttttgtcagcacatcaagagggatgcctcaatgcagagaactttaat
gcttgtctcaaggcttgccagactgcagccaaggatgtttttaatttctaccggcaggct
ttggagaaaaaatatcatacatgtaatgagataagctag
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