Homarus americanus (American lobster): 121874988
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Entry
121874988 CDS
T07477
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential-gamma protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hame04040
]
121874988
Ion channels [BR:
hame04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121874988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Holin_BhlA
Motif
Other DBs
NCBI-GeneID:
121874988
NCBI-ProteinID:
XP_042235276
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MDEGDEETGGTDARPRTMGGDVECGRGGVGGGGGGGGGLLAPQPPPQPLRSNLLALSTAD
AANKEAKNKNVKSHSIHGMGEEDRHNRPHQEMGQLTIEEKKFLLSVERGDVAGVRRMLLR
CSESGIMMNLNCVDPLGRSALLMAIDNENLEMVELLRVETKDALLHAISEEYVEAVEVLL
EHEETVHTPGEPHSWEAIPPETATFTPDITPLILAAHRDNYEIIKILLDRGATLPGPHDL
RCGCEECVTSRLEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFME
HEFRSEYQVSGASTRLRKQCQDFATALLDHTRSSYELEVLLNHDPTGPPHERGEGCLNRL
KLAIKLKQKKFVAHPNVQQLLASIWYEGLPGFRRKNMALQALEIVKIGLLFPIFSIVYVL
APHTSLGQTMRKPFIKFICHSASYLTFLCLLILASQRIETVIVDWFGATPTLKKWVATDV
TTRRGAPPSLVEWLILAWVFGLIWSEIKQLWDVGLREYVGDMWNVIDFITNALYVATIAL
RIVAYYQVQREIRKNLGTDNLPRQNWDTWDPMLIAEGLFAAANIFSSLKLVYIFSVNPYL
GPLQVSLSRMVVDILKFIFLYLLTLFAFSCGMNQLLWFYADLEKQTCDEEGQPQDNMTSG
SGSGDEDSGPNIDSCIVWRRFSNLFETTQTLFWAAFGLIDLTNFELTGIKPFTRFWGMLM
FGTYSVINVIVLLNLLIAMMNHSYQLVSERADTEWKFARSKLWISFFEEGGTCPPPFNTI
PTPKSLYYLLHWFYKKFCGQTKAAKKEHMRTIRRKARQASERELRYQSIMRNLVRRYVTV
EQRKAENQGVTEDDVNEIKQDISAFRCELVEILKISGMNTSTATTSGQGSGGKKNRQKER
RLMKGFNLGVNTLSTTQSLGATTVLPATAEVVEVAVKRSPQNKLARLARLAEARLGRPTN
KKRWGTLVEAAKNAKVKKLLSRSRSDESLSSEPGNEITGNSEDALGGGGETPTPLQNLPP
GILRGPDGSSEATRQERTGSGVSGTMHLDAAALVSQHEPVKRPPKSSVSFDQSALAGASS
SSPSHSSTETEPPPPYPQWPRPVSTSSNVTEPTVTAASPSSGSGSLPPLAVSESSEPLVG
AGPPANGSVQPPRLPGIQPVNRHMAAGWL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggacgagggtgacgaggagacgggaggcacggacgcccgaccacggacgatgggcggc
gacgtggagtgcgggcggggcggagtgggtggcggaggtggaggaggaggaggcctcttg
gccccacagcctcctccacaacccctccgctccaacctccttgccctctccaccgccgat
gcagcgaacaaggaagccaagaacaagaacgttaagagccacagtatccatggcatgggg
gaggaggaccgccacaacagaccccaccaggagatgggacaactcaccatcgaggagaag
aaattccttctctcggtggaacggggagatgtggccggtgtccgcaggatgctgctgcgg
tgctcggagtccgggattatgatgaatttaaactgtgtggatcctttaggacgctctgct
cttcttatggccatcgacaacgagaacctggagatggtggaactcctcagagtggagact
aaagacgccctcctccatgctatcagtgaagagtacgtggaggccgtggaggtgttgttg
gaacatgaggagaccgtacacaccccaggagaaccacacagttgggaggccatccccccg
gagacggccaccttcaccccggacatcacgccgctcatcttggccgctcacagagacaac
tatgagattatcaagatcctcctcgaccgtggtgccaccttacctggccctcatgacctc
aggtgcgggtgtgaggagtgcgtgacctcccgccttgaggactccctgagacacagtagg
agtcgcatcaacgcctacagagctctggcctcaccctccctcatcgccctctcatccaag
gaccccatcctcaccgccttcgagctgtcatgggaactccgcaggctgtccttcatggag
cacgagtttcgcagcgagtaccaggtgagtggagcgagtaccaggctcaggaaacaatgt
caggacttcgccacggccctcttagaccacacacgatcatcctacgaactggaagtccta
ctcaaccacgatcctacagggccccctcacgaacggggagagggatgcctgaatcgcctc
aaattggccattaagttgaaacagaagaagttcgtggctcatcccaacgtacaacaactc
ctggcctccatctggtatgaaggtctcccaggatttaggaggaagaacatggccctacaa
gccttggagatcgtcaagattggtctcctcttccccatcttctccatcgtgtatgtcttg
gcccctcacacctccctaggccaaactatgaggaaaccgtttatcaagttcatctgtcat
tcagcttcctatctcaccttcctctgtttgttgatcctggcgtctcagcggatagagact
gtaatcgtggactggttcggggcgacacccacccttaagaagtgggtggctactgacgtc
accacccgcaggggagcgccgcccagtctggtggagtggctaatactggcctgggtgttt
ggactgatatggtcggaaatcaaacaactgtgggacgtcgggcttcgggagtacgtcggg
gacatgtggaacgtcatagacttcatcaccaacgctctctacgtggcgaccatagccctc
aggatcgtcgcttactaccaggtacagagagaaattcggaaaaacttaggtacagacaac
ctacctagacaaaactgggatacctgggaccccatgttgattgctgagggtctctttgcc
gctgctaatatcttcagttccctcaagctggtgtacatcttcagcgtgaacccttacctg
gggccactgcaggtgtctttatccaggatggtggtggacattcttaagtttatcttcctc
tacctcctcacgctcttcgctttctcctgtggtatgaaccaattgttgtggttctacgct
gacttagagaagcagacgtgtgatgaggagggacagccgcaagataacatgacatcaggt
tcaggttcaggggatgaagattcgggtccaaacatcgactcgtgcatagtgtggaggcga
ttctcaaacctgttcgagacgacacaaactctcttctgggcagcattcggcctcatcgat
ctcaccaacttcgaactgacgggcatcaaaccattcaccagattttgggggatgttgatg
tttgggacgtactctgtcatcaacgtcatcgtgctgctcaatctcttaatagctatgatg
aatcattcttatcagctggtttcagagcgggcggatactgagtggaaattcgcccgtagc
aagttgtggattagtttctttgaagaggggggaacatgtccaccccccttcaacaccatc
cctacacctaagagcctctactacctcctccactggttctataagaagttctgtggccag
accaaagcagccaagaaggaacacatgagaactattaggaggaaggctagacaagcaagc
gagagggaattaagatatcagagcattatgaggaacctggtgcgtcgttatgtcacggtg
gagcagcggaaggccgaaaaccagggcgtgactgaagatgacgtcaacgagatcaagcaa
gacatctcggccttccgctgcgaactggtggagatcctcaagatctcaggaatgaacact
tccacggcgaccacctcaggtcaaggttctggaggaaagaagaatcgtcaaaaggagaga
agactcatgaaggggttcaacctgggagtgaacactctcagtaccacccagagtttaggg
gcgaccactgttctcccggccacggcggaggtggtggaggtggcggtgaagcggtcgcct
caaaacaaactggcgcggctggccaggctggcggaggcgagactgggccgcccgaccaac
aagaagcgttgggggacgctcgtcgaggctgctaagaatgccaaagtaaaaaagttatta
tccaggtcccgctccgacgagtcgctctcctccgaacctggcaacgagatcaccgggaac
tcagaggacgctcttggcggggggggcgagaccccgacccccctccagaacctgccaccc
gggatattgaggggccccgacggttcctcggaggccacacgacaggagcggacggggtca
ggagtcagcgggacgatgcatctggacgcagcagcgctggtgagtcaacacgagccggtc
aagaggccgcccaagagctctgtgagctttgatcagtcggcgttagcgggcgccagcagc
agcagcccttcccactcctcgactgaaacagagcctcccccgccctacccacagtggcct
cgcccagtgtccacttcctccaatgtcaccgaacccacggtcactgccgcgtcaccttcg
tcaggcagtgggtctttgccgcccttggcagtgagcgagtcgtcggaacccctggtgggc
gccggacccccagccaatgggtcggtacagccaccacgactgcccggcatccagccagtc
aacagacacatggctgctggctggctctga
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