Homarus americanus (American lobster): 121874993
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Entry
121874993 CDS
T07477
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
hame
Homarus americanus (American lobster)
Pathway
hame02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121874993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hame02000
]
121874993
Transporters [BR:
hame02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121874993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
AAA_30
Mucin15
Motif
Other DBs
NCBI-GeneID:
121874993
NCBI-ProteinID:
XP_042235281
LinkDB
All DBs
Position
Unknown
AA seq
1850 aa
AA seq
DB search
MHDASSATNGEGRRKRSVWRHLLLLLWKNLILRRRHWLLTFFEIFLPTALFSIILFIRLI
PGSIFIPKYINTTTIYEPNDETRLRSDVCANYGIWSNKTETCFVVPRKLGAMQIFYGPPG
EFTSGTASYVASKLNIKENALTPVESNEDMNNLVKQYYYTANSSVPPYYIGLYFNDLDVP
EGDTAPEDLKYDLRLIGSWSTGFLYPFMQTAGPGESANKYIKQGFAFIQSLVDRYYISQL
TGNNTYMDDYKVEIQKYPYPTYYNDYGVSQLYGSFLPSYVVLSLVLLAPSLIKSVVHEKE
TGVRELVRLMGLNRWLVWLGWFLHALVMVLVVVSIITIMITVGLHSKGVYIPPILNYSDP
FFVWVLLTLYGISAIMFCLTIATFFSRPTLATTLGVLIWLFSYYIPNALTYFRYDKMALT
PKLLCCLLPNMAMALSFRVIEMFEGRAIGVHWNNLWETGNPRDQLSPALLLIMLAVDSLL
YGVIIWYVDQVSPGTYGVPQSWYFPFQKTYWCGGKRVEESEGTDQDPTDTRTDQYFEEEP
TGLIPGIVIKNLRKEFKKLGGKVKVAVENVSMTCYQGQCTVLLGHNGAGKTTTMSVLTGV
YAPSGGYAEVGGWNIATNLKEAREEVGLCPQHNMLFVDLTVMQHLLFFGRLKGMRTGAAK
KEGQGILKQLDLLDKQDMFGNQLSGGMKRKLCLAISLIGGSKVVILDEPSSGLDPESRRW
VWDVVQGERGRRTVLVTTHHMEEADVLGDRVAIMASGKVVCAGSTLFLKNKFGDGYTLDM
MVKEDSNLDTLKAEVVNHMPSASLHTCHNGEVTFKLPPTTSKFAPLLESLTTRKEELGVR
HFGLSLTTMERVFIRVSELIEKTEAQDPKTSETCQENGNQNMNLDAILEDGLGNSSSSSQ
QQLFSKGNNGLERMTGNRLLMQRIKAFFIKRIIYSKRKWPLIITQGLVPVVVTVACLLVD
QTFDFLISQEPQLVLNTSLFPYSSSFMKVDPDLESLSFQYRSLFSGSHEVSSTDNMTGSL
LKAAHDNLLHYRENNICSAEFLSEEEANTLRILTQTIPFHTLGIGTSLVTNALLRLATNS
TIHTITTTNWPLPPDTTWLFSSEFSTSSLVYANMMPLALAFLSASFLVFPLQERETNTKQ
VQVMTGAPVWALWATTFLWDFTTYMISLLLIYICFMTMDPNGYFTKGEAPGALFLLLLLY
GWGSIPMAYVFSFPFQTAASGFAVLALVNIVAGQLMTVVVWGLRMAEQPTLTTVSDILYW
ATSVIPAYPVATGFGHIVQVGVHNSKCNQFNETVTQELCKALYAFAQDNDFMQCCRYGDP
PLCSKVGTGVCLEEWSYYRLQQPGMGSDLLSLFVNGIIFFGIIVFIEAGAPIFFIRLWRR
ISYQDRKFQQVKPQGQVREVDEDVVAEADLVTSLMTGSQPTANTLPMINGSVDATLLASM
LSKQYYGCLVRAVDNISFRVNRGECLGLLGVNGAGKTTTFKMLTGDEVPTAGDATIDGLS
LSHERNKFVQNIGYCPQFDAFLDDLTGVEMLHLMGRLRGMSEAQLRENVNSLVSLVGLTE
CAKRPSSTYSGGNRRKLSTALALVGNPPLVFLDEPTSGVDPVSRRRVWTAIRQAINNGQS
VVLTSHSMEECEALCSRIIIMSRGRLRCVGTTGHLKAKFGQGYSLQVKLRTHGFTQGNKS
EDEQIYVTKVNELKIVINYFLPGSTLTDQHKGMLAYRVPISVSWGQLFSVMEALKAGRDP
GAATPLREDLPLASPSTSIVEVYAASDTSLEQVFLSFAREAAMEQAPGVPGTVTDNSVAP
VASSASIIQVPGTNNSLDMYEVPTGNQGPLAQGESSQSKNQDGSPKITEL
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcgtcatcagcaacaaatggtgaaggtcgtcgaaagaggagcgtgtggcgt
cacctcctgttgctgctatggaaaaacttgatactgaggcgcagacactggcttctgact
ttcttcgagatcttcctccctaccgccctgttctctatcatcctgtttatcagactaatc
ccgggatccatcttcatccctaaatacatcaacaccacgaccatatacgagcccaacgac
gagacgaggttgaggagtgacgtctgtgcgaattacggaatatggtcgaataagaccgag
acctgcttcgtggtgcccaggaagttgggagctatgcagatcttctatggacctccagga
gagttcacgagtgggacagctagttacgttgccagtaaacttaacatcaaggaaaacgct
ctcacaccagtagagagcaacgaggacatgaacaacctggtgaagcagtactactacact
gccaactcatccgtcccgccctactacatcggcctttacttcaacgacctggacgttccg
gagggcgatacggcacctgaagaccttaaatacgacctgagactgatagggtcctggagc
acaggcttcctctatcccttcatgcagacggccgggccaggcgagtccgccaacaaatac
atcaagcaagggtttgccttcatacagagccttgtcgaccgctactatatctctcagctg
acgggtaacaacacgtacatggacgactacaaggtagagatacagaagtacccctacccg
acctactacaacgactacggtgtcagtcaactttacgggtcgttcctgccatcatatgtc
gtgctgtcgctggtcctgttggctccctcactgatcaagagcgttgtacacgagaaggag
acaggagtgagggagttggtacgcctgatgggattgaaccgctggcttgtgtggttaggg
tggttcctgcacgccttggtaatggtgttggtagtggtcagtatcatcaccatcatgatt
accgtgggtcttcacagcaaaggcgtctatatcccacctatcctcaactacagtgacccc
ttcttcgtgtgggtcctcctcactctctatgggatctcagccattatgttctgtctcacc
atcgctaccttcttcagtcgaccgacacttgctaccaccctgggcgtcctcatctggctc
ttctcctactacatccctaacgccctcacctatttccgctacgacaagatggcccttacc
ccgaagcttctgtgctgtctcctacctaacatggccatggcgttgtccttcagggtgatt
gagatgttcgagggaagagctattggtgtccactggaacaacctctgggagacaggtaac
ccgagggaccagctctccccggccttgttgttgatcatgctggctgtggattccctcctc
tacggcgtcatcatttggtacgtggaccaggtcagcccaggaacctacggcgtcccacag
agctggtactttcccttccagaagacgtactggtgtggagggaagagggtggaggagagt
gagggtacggatcaagaccccaccgacacacgcactgaccagtacttcgaggaggaacca
acagggctcatccctggcatcgtcattaagaatctcaggaaggagttcaagaagctggga
ggaaaggtgaaggtggcggtggagaacgtgtccatgacgtgttaccagggtcagtgtacc
gtgttgctgggtcacaacggtgctggcaagaccaccaccatgtccgtcctcacaggtgtg
tacgccccaagcggtggatatgctgaagtaggagggtggaacattgccaccaacctgaag
gaggcgcgggaggaggtgggtctctgtcctcaacacaacatgctcttcgtcgacctcacc
gtcatgcagcatcttctcttcttcggcaggttgaaaggtatgagaacaggggcagcaaag
aaagaaggccaagggatcttaaaacaactggacctgctggataaacaagatatgtttggt
aaccagctctcaggaggaatgaaaaggaagctctgtctcgccatttctctcataggtggc
tccaaggtggtgatcctagacgagccgagcagtgggctggaccctgagtctcgccggtgg
gtgtgggacgtggtgcagggagagcgagggcgccgcaccgtcctcgtcaccacacaccac
atggaggaggccgacgtcctgggcgaccgagtagccattatggcctccggcaaggtggtg
tgtgccggctctacactcttcctcaagaacaagtttggtgacggatacacactggatatg
atggtaaaagaggattcgaacctggataccctgaaggcggaggtggtgaaccatatgccc
tccgcctccctccacacctgccacaacggggaagtcactttcaaactcccgcccaccacc
tccaagttcgcgcccttattggagtccctcaccaccaggaaagaggagttgggtgtgaga
catttcggcctttccctcactactatggagcgagtcttcataagagtgagtgaactaata
gagaaaaccgaagcacaagatcccaagacgtcagaaacatgtcaagaaaacgggaatcag
aatatgaacttagatgccatactagaagatgggttaggcaacagcagcagcagcagccag
caacaactcttcagcaaaggcaacaatggactagagcggatgactggtaacaggctcttg
atgcagaggataaaggcgttcttcatcaagcgaatcatctactccaaacggaagtggcct
ctgattatcactcagggtctggtgccggtggtggtgaccgtcgcgtgcctcttggtggac
cagactttcgacttcctcatctcccaggaacctcagctggtcctcaacacctctctcttc
ccttactcctcctccttcatgaaggttgacccagacctcgaaagtttgagcttccagtat
cggtctcttttctcagggagccatgaggtgagctcgactgacaacatgactggaagttta
ctgaaagcagcacacgacaaccttctacattatagggagaataacatttgctctgcagag
ttcctaagtgaagaggaagccaacacgttaaggatcctcactcagaccatccctttccac
actctggggatcggtacctccctcgtcaccaacgctctcctccgcctcgccaccaactcc
accatccacaccatcaccaccaccaactggcccctcccaccagatactacatggttattc
tcgagtgagttttcgaccagtagtcttgtgtacgccaatatgatgcccctcgccctggcc
ttcctctcagcctctttcctcgtcttccccctgcaggagagagagactaacaccaaacag
gtacaggtgatgactggggctcccgtgtgggcactctgggccaccactttcctctgggac
tttaccacctacatgatatctttacttcttatctacatctgtttcatgacgatggaccca
aacggctacttcaccaaaggcgaagctccaggagcgttgttcctcctcttactgctgtac
gggtggggcagcatccctatggcctacgtcttcagcttccccttccaaactgctgcctcg
ggcttcgctgtcctggccctcgtaaatattgtcgctggccagctgatgacagtggtggtg
tggggcctgaggatggcggagcagccgactctcaccaccgtcagtgacatcctctactgg
gccacctccgtcatccctgcctaccctgtggccacgggctttggtcacatagtccaagtg
ggggtccacaacagcaagtgcaaccagttcaacgagacggttacccaggaactgtgtaag
gcgctctacgcgttcgctcaagacaacgatttcatgcaatgttgtcgttacggcgatcca
ccactctgtagtaaagtggggacgggggtgtgcctggaggagtggtcgtattatagactc
cagcaacccggaatgggctcagacctgctctcactcttcgtcaatgggattatcttcttt
ggcattatcgtttttatagaagcaggggcaccaatattcttcatacgactgtggcgcaga
atctcgtatcaagatcgcaagttccagcaggtgaagccacaaggccaagtccgggaggta
gacgaggacgtagttgctgaggctgacctggtgacctccctcatgactgggtcacagcca
accgccaacaccctcccaatgattaatgggtcggtggatgccacactcctcgcctccatg
ctgtccaagcagtactacggttgccttgtgcgcgccgtggacaacatcagtttcagggtg
aaccgcggggagtgtctaggcctgttgggggtgaacggcgcaggcaagaccaccaccttc
aagatgctgacgggagatgaggtgccgacagcaggagacgctacgatagacggcttgtcc
ctcagccacgagagaaacaagtttgtgcagaacatcgggtactgccctcagtttgatgcc
ttcctggatgacctcaccggggtagagatgctgcatctgatgggtcgtctgcgtggcatg
agtgaggcacagctgagagaaaatgtcaactccctggtgtcacttgtgggactgacagag
tgcgctaaacggccctcctctacgtactcaggaggtaaccgcaggaagctgtccacagcc
ttggctctagtggggaacccgcccctggtgttcctggacgagcccacctcaggagtagat
cctgtgtctcgtcgtagggtgtggacagccatcagacaagccataaacaacgggcagagt
gtggtgcttactagccactctatggaggagtgtgaggcgctctgctcccgtatcatcatc
atgtctcgtggcaggcttcgctgtgtgggcaccaccggccaccttaaagcaaagttcggg
cagggctacagcctccaggtgaagctcaggactcacggtttcactcagggcaacaagtca
gaagacgaacaaatttatgtcacgaaagtgaatgagctgaagatcgtcattaattacttc
ctccctggctctactctcaccgatcaacacaagggtatgctggcctaccgggtgcccatc
agcgtgtcctggggtcagctgttctcggtgatggaggctctgaaagctggtcgagaccct
ggagctgccacgcctctgagagaagacctgcctcttgcctccccttccacctccatcgtg
gaggtgtacgccgcctcagacacctccttggagcaggtcttcttatctttcgcgagggag
gcggcgatggaacaagctcctggtgtccctggtactgttaccgataacagcgtagctcct
gttgcttctagtgcctcaattatccaagtccccggtactaataactccctcgatatgtat
gaagtaccgactggtaaccaggggccgttggcacaaggagaatcatcccaaagtaaaaat
caagatggatcaccaaaaatcacagaattgtaa
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integrated database retrieval system
