Homarus americanus (American lobster): 121875210
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Entry
121875210 CDS
T07477
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121875210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121875210
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121875210
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
121875210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
121875210
NCBI-ProteinID:
XP_042235596
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MEIQLASELPRVKAMVGVQGSARPRLVTPGEIISQDTSFMRGHGTYMEEGVQVASVAGYV
TRVNRLITVTPLRQVYQGAVGDTIVGRITQVQNIRWKVDVNSRLDAELRLSNIQLPGGEQ
RRSSLEDERGMRGLLREGDLVCVEVQKISDDGLLRLTARSNKFGKLSQGTLLAVSPSLIV
QDKQRMHDLPCGARVVFGANGYVYITPTVPQEQTSTYTVNFEEVTVDVRKTIGRLRNCIK
LLAYHSIMISPTSVMTAFDLSTEQEYEVKDLLKPDIMQDVAMATVQLMNE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcagttagcaagtgagctgcctcgagtgaaggcgatggttggtgtccaagga
tcagcaagacctcggctagttactcctggagaaatcatatcccaagacacaagctttatg
agaggtcatggaacatatatggaagaaggtgttcaggtggcatcagttgcaggttatgtg
acaagagtgaatcggctcataactgtgactcctttacgacaagtatatcagggagcagtt
ggtgacacaatagttggacgcattacacaagttcagaacatcaggtggaaagttgatgtc
aattctagattggatgcagagctcagactgtcaaatattcagctaccaggaggagagcag
cgtcgtagtagtttagaagatgaacgtggaatgagaggactgttaagagaaggtgatttg
gtgtgtgtggaagttcagaagataagtgatgatggactgctgagacttactgcacggtcc
aataagtttggaaagctttcccaaggaaccctgttagctgtttcaccgtcactcatcgta
caggacaaacagaggatgcatgacctgccatgtggtgcccgagttgtgtttggagcaaat
ggatatgtttacataacaccaacagttccccaagagcaaacctcaacatacacagtgaac
tttgaagaggtgacagttgacgttcgaaaaacaattgggcgtttacgtaactgtattaaa
cttctggcatatcattccattatgatttcaccaacaagtgtgatgactgcatttgatctg
tccacagaacaagaatatgaggttaaagacttgttaaagcctgatataatgcaggatgta
gctatggcaacagtacaactgatgaatgaatag
DBGET
integrated database retrieval system
