Homarus americanus (American lobster): 121875438
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Entry
121875438 CDS
T07477
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hame03041
]
121875438
03036 Chromosome and associated proteins [BR:
hame03036
]
121875438
Spliceosome [BR:
hame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121875438
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
121875438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Lsm_interact
RRM_occluded
HAT_Syf1_CNRKL1_C
NRDE-2
LSM_int_assoc
Motif
Other DBs
NCBI-GeneID:
121875438
NCBI-ProteinID:
XP_042235929
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MADPGEDVAEDREEEMEDVEEDSDTDDDDLQEKREQELKLRVKELRKQLEGNDQYYDAYV
HLIAALRDLFELEEARATRQKMSKVYPLTPELWLDWIRDEQKVCTSNEERQFIIELFDQA
VKDYTSVQLWVEYVMFMLGSGDMTATRAVAERALTAVGTHVAEGVLIWQVVLLVEKQVYA
GLQKAGTVQSEKEIAEQEKQLQRIQGLLRRQMRVPLLNCSTESLAEEAAEFFEGDIEPQM
KEDLKKTQSKLREKIPFEDELLTVANDVDKLAAYRRYINHIKETDNPAAVQSLYERAVTE
HCLDVGLWEEYVRFVMHQFPWLDYVVLPVCERSQRNCPWSATLCEFHITALQMFATQGEE
NSVASKIKGALEKGLGCGLQSGGEATRMWMAYLIYLRRQIKWDQSHDAELHALREAGQQA
ISMIDKYFGEDGDLESIVPRFLARIEAECAHNQERAREIWNDIIMKRNNNFKNASLWLEF
INLERSYGTEKHCRKLFRRALERVWDWIEEIGSAYARFEQETGTLESMEDFNKRYEDRMA
IVNKKRAEDAAKLEAEKQAEVEMNQGKKQREKANRRERNKPNKEKSSDKYSKESVFKIPE
VPVNKSTKASKQDLATNSSSRFSNSPNKLRSINNFSPPPGYKDDVMPPPRGQNFVTSPPG
YKSDGTSPDFKKDVTPPPDFKSDVTSPPDFKGDVTPPGFKSDVTPPPGFNSDVTPPPGFK
PEVPTSSNATKRGAEVLEDEPQLKKIKIGQQYGVLTELDPKDELCTVFISNLDFKIGKDE
IIPLFSDCGEILDFRLVKDYKCRSKGFGYLVFKTREGVEKCLERDRTLISGRPVYVSQYD
PNNHSHKFKYGTDLEKDKLFIRGLPFSMTESDVRKAFEPHGEIKALRLVTFQMVTKGTCY
IDYYDAVTAGKVQQAMDGTELEGKVISVLISDPSAKKNSSGTATSVLGENILGGGSKGKK
LDGSRGKGMFNLMPRALLRAPSTSTAASEAPTARPPAKMSNEDFRKMLLKK
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctggagaagacgtagctgaggaccgcgaggaagaaatggaggatgttgaa
gaggactctgacactgacgacgacgacttacaagagaagcgagaacaagaactgaagctg
agagtaaaggagttgaggaaacagcttgaaggcaatgaccagtattatgatgcatatgta
catctgatagcagcattacgagacctgtttgaactagaggaagcaagagcaactagacag
aagatgagtaaagtctaccctttaacaccagagttgtggttggactggattcgagatgag
caaaaggtgtgcacttcaaatgaggagagacagttcatcattgagctgtttgatcaagca
gtgaaagattatacaagtgtgcaactatgggttgaatacgtcatgttcatgttgggtagc
ggagacatgacggccaccagagcagttgcagaacgtgctctcactgctgtaggaactcat
gttgcagaaggagtgctaatatggcaagtggtgctactggtagagaagcaggtatacgca
ggcctacaaaaggcaggtacagtacaatcggaaaaggaaattgcagaacaagaaaaacag
cttcaaaggatccaaggactcttacgcagacagatgagagttccgctactcaactgtagt
acagaatcattggccgaagaagctgcagagttttttgagggtgacattgagcctcagatg
aaggaagacctaaagaaaactcagagcaaactcagagagaaaattccatttgaagacgaa
ttacttactgttgcaaatgacgttgataagctggctgcatatcgacgttacatcaaccat
ataaaagaaacagacaacccagcagctgtacagagtttatatgagagagctgtcactgag
cactgtcttgatgttggtttgtgggaggagtatgtccgttttgtcatgcatcagtttccc
tggttagattatgttgttttaccagtttgtgagcgcagccaaagaaactgtccatggtct
gcaacactgtgtgagttccacatcacagctctacaaatgtttgccactcagggagaagaa
aactctgttgcatcaaaaataaaaggtgccttggagaaaggtcttggatgtggtcttcag
tctggtggtgaagctactcgcatgtggatggcataccttatatatttgcgcagacaaatc
aagtgggaccagtcccatgatgcagagcttcatgctctcagagaagcaggacaacaggct
ataagcatgattgataagtattttggtgaagacggagacctggagagtatcgtacctcgt
ttcttggctcggatagaagctgaatgtgctcataatcaagaaagagcaagagaaatctgg
aatgacattattatgaagcgaaacaacaacttcaagaatgcaagtctttggctggagttc
atcaatttagagaggagttatggcacagagaaacactgccgtaaacttttccgccgtgcc
ctggaacgtgtctgggattggatagaagaaataggctcagcttatgctcgctttgaacaa
gaaactggaacactggagtcaatggaggatttcaataagagatacgaagacaggatggct
attgtaaataaaaagagggctgaagatgctgctaaactagaagcagagaaacaagctgaa
gttgagatgaaccaagggaaaaaacagagagagaaagcaaatagaagagaaaggaataag
ccaaacaaagaaaaaagcagtgataaatattctaaggaaagtgtatttaaaattcctgag
gttccagtcaacaaatcaaccaaagcttcaaagcaagatttggctacaaattcaagctca
agattcagcaatagtccaaataaacttcgttccataaacaacttttcaccacctccagga
tataaggacgatgtaatgcctccacccagaggccaaaactttgtcacatcaccaccaggc
tacaagagtgatggcacatctccagacttcaagaaagatgtcacaccccctccagacttc
aagagtgatgtcacatctcctccagacttcaagggtgatgtcacacctccaggtttcaag
agtgatgtcacaccccctccaggcttcaacagtgatgtcacacccccaccgggcttcaag
ccagaagtacctacttcatccaatgctaccaagagaggagcggaagttttggaagatgaa
ccacaattaaagaaaattaaaattggacagcagtatggtgttctcacagaattggatccc
aaagatgaattgtgtactgtcttcatcagcaacttggacttcaaaataggaaaggatgaa
ataattccattatttagtgactgtggtgaaattttagattttaggctggtgaaggattac
aaatgtcgaagtaagggctttggctacttagtcttcaagacacgtgaaggtgttgagaaa
tgtttagaacgtgatcgaactctcatcagtggacgtcctgtttatgtttcacagtatgac
cccaataaccattctcataaattcaaatatggtacagacttggagaaagacaaattgttt
ataagggggttgccattctcaatgacagaaagtgatgtaaggaaagcctttgagccacat
ggagaaattaaggcactgcggctggtcacctttcaaatggtcaccaaaggcacatgttac
atagactattatgacgcagttacggcaggaaaagttcagcaagccatggatgggacagag
ctagaaggtaaagtgatttctgtgctcattagtgacccctctgccaaaaaaaattcatct
ggtacagctacatcagtcctgggggaaaatattttaggtggtggcagtaaaggaaagaaa
ttagatggcagtcgaggtaagggcatgttcaatttgatgcctcgagctctcttacgtgct
ccttcaacttccacagctgcttcggaggctcccactgcacgacctccagctaagatgagt
aatgaggacttccgaaaaatgctcctgaaaaaatga
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integrated database retrieval system
