Homarus americanus (American lobster): 121875459
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Entry
121875459 CDS
T07477
Name
(RefSeq) transcription factor SOX-8-like isoform X1
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hame03000
]
121875459
Transcription factors [BR:
hame03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121875459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121875459
NCBI-ProteinID:
XP_042235960
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MDVKKERLSPLHHGDGGGGGGGGNYVNPSDISTSTASTRPCGGVVAPPPPPPPQQPPPPP
PSASDHHNNLHHHHSNKASGVVKSYHHLTAVSNNSSLPTVISTTSSSPSPTSCTTTGGGD
LGRSTVSNRGGGIGIRVSVVGGDSGGVGGRSHLIVGGGSGDDSIVETVLMPGAPNFSGEI
SDAVSKILEDYDWSKIPLANKDGTGDSERRKVHVKRPMNAFMVWAQEARRKLSCSHRQVH
NAELSKSLGRIWRGMTEDQKRPFIERADHLRRKHKQEYPDYKYQPRRRKENVKTVSKPSP
GGHNTQLGVQDLSGPHHYVSSVKGGGLGLNLHPLSPPHSPSGQGVIRGHTEGHLGETVFV
PDCLADSFETIDRAEMNKYLLPDQGSGAHYTSTPTHVTHGSLQPMSTMASMNPMTAPSSS
TCSSASGTLTSLPPLGSRLIPSAQAYGGSGSPYYTGGASPQPGSHGSPDIPNEIVAGVPS
TGGVSPGGSPGSPVGEFVELQPPRVPKEEPLPPLSAPKPSNMNPFLHQNLCYSTQPYAAF
QYSYPYAAMWH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaaaaaggaacgcttatctccactccaccacggtgatggaggaggtggtgga
ggaggaggaaactacgtcaatccatctgatatctccacctccacagcatccactcggcct
tgcggtggagtggtcgcccctccaccaccaccaccaccacaacaaccaccaccaccacca
ccgtcagccagcgaccatcacaacaacctccaccatcaccatagcaacaaggcgtcaggt
gttgtcaagtcctaccatcatctgacagcggtctccaacaactcctccctccccaccgtg
atctccaccacttcctcttcaccctcccccacgtcctgcaccaccaccggaggaggagac
ctgggaaggagcacggtctccaacagaggaggaggaatagggatacgagtgtccgtcgtt
ggaggagacagcggcggtgttggaggacggagccacctcattgtcggaggaggaagcgga
gacgacagtatagtggagaccgtcctcatgcccggcgcccctaacttctccggggagatc
agtgacgccgtctccaagatcctggaggactacgactggtccaagatacccctggcgaac
aaggacggcacgggtgacagcgagcgacggaaggtccacgtgaagcgacccatgaatgcc
tttatggtgtgggcgcaggaggccaggcgcaagttatcctgttctcatcgccaagtccac
aacgccgagctctccaagtctctcggcaggatatggaggggaatgacggaggatcagaaa
cgtccctttatcgagagggccgatcacctccgtcggaagcacaagcaggagtacccggac
tacaaatatcagcctaggaggaggaaggagaatgttaagacggtgagcaaaccttcgcca
ggaggccacaacacccagctcggcgtccaggacctgtcgggaccacatcactacgtcagt
agtgtgaagggaggtggtctcgggctgaacctgcacccactgtcgccgccacactcgccg
tcaggtcagggtgtcatcaggggacacacggagggtcacctgggggagaccgtctttgtc
cccgactgtctcgctgactccttcgagaccatcgatcgggccgagatgaacaagtacctc
ctgcccgaccagggctcaggcgcccactacacctccacacccacccacgttacccacggc
tccctgcagcccatgtccaccatggcctccatgaaccccatgacggctcccagcagcagc
acctgcagtagcgcctccggcaccctcacctccctcccgcccctcggctcaagactcatc
ccctccgcccaagcatatggaggttctggttccccttactacacagggggcgcctccccc
cagcctggtagccacggctctccggatatacccaatgaaatcgtcgctggggtgccctcg
acagggggggtgtccccagggggctccccgggctcacctgtaggggaatttgtagagcta
cagccgccgcgggttcccaaggaggagcctctgccgcccctctcagccccgaagccctcc
aacatgaaccccttcctccaccagaacctgtgttactccacccagccatacgccgccttc
cagtactcctacccttacgccgccatgtggcactga
DBGET
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