Homarus americanus (American lobster): 121875511
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Entry
121875511 CDS
T07477
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
Organism
hame
Homarus americanus (American lobster)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
Motif
Other DBs
NCBI-GeneID:
121875511
NCBI-ProteinID:
XP_042236011
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MGSYGQVGFTCVKDLLFRVYTDKEVQQISVVKLTNDESINELGHFAADGLYDLRMGPMST
RERDVCETCGQDGLRCLGHCGHIEMPLPVYNPFFYGVLSKLLYGICNHCFRFQAPDYRVI
QLLYQSKLLDEGYAKEALNVKDTVARITSHGDESQEISTGINDRVIRGSLKSYENVELMQ
ILSETLKKYCKEVMKGGTSSHETSTSNVKAVQDQVIKSFFDDCKAKLSCKFCRRPLMKLS
LKNSRFMKATIKMKLKKSKSDDEEESVSSGLVVDGQSYITCDQARAILRKCWAREEGLLK
CLYPILASSKSEHPTDMFFLSTLLVIPPKYRPCNTQDGLVVEHDTSVLLKNVVRMSRVLT
FLISIVNGSISELPETIEYILSQIPGNTPIEKMQGTWHNMQASVDNLFDTNLNPTMKNSL
RGLRQVIEKKHGLFRRNLMGKRVNYSARSVAAPDPLLAVDEVGVPMDFAKRLSYPVPVTQ
WNVEKLRQLVKNGPEVYPGAVMVEDEEGKKKRLSSTDEKQRNAVANKLLTPTESHVRKVN
ATKIVYRHLQNGDFVLMNRQPTLHRPSIQAHRARIMLNDRVFRMPYANCKAYNADFDGDE
LNLHFPQNEIARSEAQHLVTTHNQYLTPKDGSPLAGLIQDCVVASVMLTMRGKFFAREDY
QQLIYTGLSDQSERIKLLPPAIIKPKKLWSGKQVISSLLLNIIPENKARPSFTFKTSVKA
DLWQTNEERAWKAGGPPEKKREAMTDSDFVMRDGELLSGVIDKSAIGSTSHGLIHVCYDL
YGGGVSSKLLTAINRLCVYYLKWTGHTISVKEFATPSHVSARRRAALHRLVQNASSEVSR
KLNITEESFQDYFEKLHMSHSEVEMAAIDAAYTSVLAPTTSQVTGDNERGLLRRGLDNHM
RMMVDTGAKGSKVNMNQMASLFGSVAIDGKRMPLSITGKTLPSFKAYDPNPRSGGYIPNR
FMTGINPQSYFFLCIVGRDSLQHTAVKTADSGYLQRCLIKHLEGINVKYDMTVRNIDGLV
LQFAYGEDGLDVTKVPFLKNPHTLDVLVKNYSRLLDERSLSIAKSVGEKKLVDKYKMKLK
KWHKKANERKVRNSAFLKFCKKTAATVESSGFNKDTGRANISRELQDMWQQLTPEEKKKY
NKNIKCPDPVNSIFSGASNLGVVSEALDDLIERYYEENYHKQPQQQQNLTQKQVATSVHM
KVLTSMVDPGEAVGALCAQAIGEPLTQMTLNTFHFAGRDELNVTLGVPRMVEILRTASRN
ISTPIMELPFYPHVKRSQAEFLRVKLSEVSLSKVLHGLEVTSRLEKDEKLRVHRRTKVKL
TFLPHRDYKKMFAVNPSQVLNYVEREFIPKILLKEIKNSFGKTKKMCSTITEENKDSDGD
DENNDNIELDAAKETKKSKKKMKANYGVESSEEEDEDDFQQEAPEDTDATSSSRSKKRQE
QDYSEDEEAELVSEEEGDQETVKEQLLPQDEEENQSQEDIMDGEDVRKHKKGISLKEAEV
RKETLLNSDSWIIDYDFDREKELWCEVTLVLPINGGNYDIPSIVRQRSQRALIHYVRGIR
RVFVVEKDDTLLLRVDGVNILKMFQYEHMLNVNCLYTNNIHQVAEIYGIEAAQRSIIREL
RAVQSVYDIKVDFRHLTLLAEYFTCEGRYKACSRQALNTSLSPLQKMSFESCTDFLKSAL
LRGEKDYMTSPSANVAVGQPVKLGTNAMQMLPVLNFS
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctacgggcaagtaggctttacctgtgtcaaggacctcctgttccgtgtgtac
acagataaggaagttcagcagatatctgtggtgaagttaaccaatgatgaatccattaac
gagctgggacactttgctgctgatggcttatatgacctacgcatgggacccatgtcaaca
cgtgaacgagatgtctgtgaaacttgtggacaagatgggctcaggtgtctgggtcattgt
ggacacatagagatgcccttacctgtttataaccccttcttctatggtgtgctgagcaaa
ctcctctatggaatatgtaatcactgcttcaggttccaagctccagattaccgagtgata
cagctcttataccaaagtaaactgctggatgaagggtatgcaaaggaggccctgaatgta
aaggatacagtggctagaatcacatcacatggagatgagtcgcaggagatatcaactggc
atcaacgacagagtcatcaggggaagtctgaagtcctatgaaaatgtggagttaatgcag
atccttagtgaaacactgaagaaatactgcaaggaagtgatgaaaggaggaacaagcagt
cacgaaacctctacttctaatgttaaagccgtccaagatcaggtcatcaaaagttttttc
gacgattgtaaggcgaaattatcctgtaaattctgtagacgtcccctaatgaagctgtcc
cttaaaaactcacgctttatgaaggcaactataaagatgaagctgaaaaagtccaaatct
gatgatgaggaggaatctgtgtcatctggccttgtggtggatggccagtcttacatcacc
tgtgaccaggcacgagccatattaaggaagtgttgggctcgagaagaaggtcttctcaag
tgtttgtatcctatactggcatcatccaagtcggaacacccaactgatatgttcttcctc
agcacactcctcgtcataccaccaaaatatcgtccatgtaacacacaagatggtctggtg
gtggaacatgataccagtgttctgttgaagaatgtggtaagaatgtccagggttcttact
ttcctcatctcaattgttaacggaagcatctcagagttgccagaaactatcgagtacatt
ctatcacaaatacccgggaacacgcccatagaaaagatgcagggtacgtggcacaacatg
caagcaagtgttgacaacctctttgatactaacttaaaccccaccatgaagaacagtctc
aggggactcaggcaggtaatagagaaaaaacacggtctctttcgacgtaacctcatgggt
aagcgtgtgaattactctgcccggtccgtggctgcccccgacccactccttgccgttgat
gaggtcggggtacccatggattttgccaagcgtctctcttacccagttcctgtcactcag
tggaatgttgagaaactgaggcagcttgtgaagaacggtcctgaggtttacccgggagcg
gtgatggttgaagacgaagaggggaagaagaagcgtcttagttcaaccgacgagaaacaa
cgtaatgccgtggccaacaagctgctcacgccgacagagtctcacgtgaggaaagtgaac
gcgaccaaaatagtttaccgacacttacagaatggcgattttgtcttgatgaaccggcag
ccgactcttcaccgtcccagcatacaggctcaccgtgcccggataatgctgaatgataga
gttttccgtatgccgtatgctaattgcaaggcttacaatgcagattttgacggcgatgag
ttaaacttgcacttcccacagaatgagatagccaggagtgaggcccagcatctggtcaca
acgcacaatcagtatctcacccctaaagacgggtccccactggcaggtctcatccaggac
tgtgtggtggccagcgtcatgctcaccatgcgcggaaagttttttgctcgtgaggattac
caacagttgatttatacgggattgtccgaccaaagcgagaggattaaattgctgccgccg
gccattataaaaccaaagaaactgtggtctggcaaacaggtcatttctagcctcctcctg
aacattatccctgagaacaaggccagaccatcttttacgttcaagacatcagtcaaggca
gatttgtggcagactaatgaagagcgagcatggaaggctggcggccccccagagaagaag
cgtgaggctatgacagattctgactttgtgatgcgtgatggagaacttctttcaggagtt
atagataaaagtgctattggctccaccagtcatggtttaatacacgtgtgttatgattta
tatggcggtggtgtctcttcaaagctcttaactgccatcaaccgtctgtgtgtgtactac
ctcaagtggaccggtcacaccatcagtgtcaaggagtttgccacaccatcacatgttagt
gccaggcgtagagctgccctccatcgtctggtacagaatgcttctagtgaggtgagtcgc
aaactgaacatcaccgaggaaagtttccaagattactttgagaagttgcacatgtcccat
agtgaagtggagatggcggccattgatgctgcatacacgtccgtcctggcgcccaccacc
tctcaggtcaccggagataatgaacgtgggttgttgcggcgaggcttagacaaccacatg
aggatgatggtggatactggagctaagggctctaaggtgaacatgaaccaaatggcttca
ttatttgggtccgtagctattgatggtaagaggatgcctctgagcattactggcaagact
ctgccatcttttaaagcttatgatcccaacccacgctcaggaggctacattcccaaccgc
ttcatgaccggtatcaaccctcagtcatatttcttcctgtgcattgtggggcgagatagt
ttacaacacacagctgtaaagactgctgacagtggctacctacagcggtgtctcatcaag
catctggaggggattaatgtgaagtacgacatgactgttagaaatattgatggtcttgtg
ctgcagtttgcctatggtgaggatggacttgatgtgaccaaagtgccattcttaaagaac
ccacacaccttagacgtactggtgaagaactacagccgactactggacgaacgatctctc
tctattgccaagtctgttggagaaaagaaacttgttgacaaatataaaatgaagttaaag
aagtggcacaagaaggccaatgagagaaaggtccgtaacagtgccttcctcaagttctgt
aagaaaacggccgccactgttgagagtagcggctttaacaaagacactggccgtgccaac
atctccagagagctacaagacatgtggcaacaattgacaccagaagaaaagaaaaagtac
aacaagaacatcaagtgcccagatcctgttaattccatattctctggcgcctctaacctt
ggggtagtgtctgaagccttagatgaccttattgaacgttactatgaagagaattatcac
aagcaaccacaacaacagcagaacttgacccagaaacaagtggcgacgtctgtacacatg
aaggttttaacatctatggtcgatcccggtgaagctgttggtgctttgtgtgcccaggca
attggtgaacccttaactcagatgaccctgaacactttccattttgccggcagagatgaa
cttaatgttacgctgggtgtgcctcgtatggtggagatcttaagaacagccagcaggaac
atctcgacccccatcatggagctgcccttctaccctcacgtcaaaaggtctcaggcagaa
ttccttcgtgtcaagttatcagaagtgtcattgtccaaggtactacatggcctggaagtt
acttcacgtctggagaaggacgagaaacttcgtgttcaccgccggaccaaggtcaagttg
accttcctacctcatagggattacaagaaaatgtttgccgtcaacccatcacaagtgttg
aactacgttgaacgtgaatttatcccaaagatactcttaaaagaaattaagaattctttt
ggaaaaacgaaaaaaatgtgctccacaattactgaggagaataaagacagcgatggtgat
gatgagaacaacgacaacatcgaacttgatgctgctaaagagaccaaaaagtctaagaag
aagatgaaagccaattatggtgttgagagcagcgaggaagaggatgaagatgacttccaa
caggaggcacctgaggatactgacgcaacttcatcatcaagaagcaaaaaaagacaagaa
caagattattctgaagatgaagaagctgagttggtgtcagaggaggaaggtgatcaggag
acagtgaaggagcaacttttaccacaagatgaagaagagaatcaatcacaggaggatata
atggatggtgaagatgtgaggaagcacaagaagggcattagtctaaaagaagcagaggta
cgcaaggagacgctcttgaacagtgacagctggatcattgactatgactttgacagagag
aaggaactttggtgtgaagtcacactcgtcctccccataaatggcggcaactacgacatc
ccgtcaatcgtgcgccagagatcacaacgtgctctcatccattatgttcgtggtattcgt
cgagtctttgtcgtggagaaggatgatacgcttctactgagggtagatggtgtcaatatt
cttaaaatgtttcagtatgagcacatgctgaatgtgaactgcctgtacaccaacaacata
caccaggtagctgagatatacggcattgaggctgctcagcgttccatcatcagagagctg
cgagctgtacagtctgtgtatgatatcaaggttgacttccgccacttgactctcctggct
gaatacttcacttgtgaggggagatacaaagcttgttctcggcaagcgttaaacacctct
ctttcaccactacagaagatgtcttttgaatcatgtacagacttccttaagtctgccctc
ttaagaggagagaaagattatatgacatctccctctgccaatgttgctgtgggacaacca
gtaaagttaggtacaaatgcaatgcaaatgttgcctgtcctaaacttctcctaa
DBGET
integrated database retrieval system
