Homarus americanus (American lobster): 121876188
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Entry
121876188 CDS
T07477
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121876188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121876188
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121876188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
121876188
NCBI-ProteinID:
XP_042237083
LinkDB
All DBs
Position
Unknown
AA seq
2547 aa
AA seq
DB search
MAAASEGEDFFALVSIEEKGQISENLAKKLQDVWTAKLKELTNLKVESEKERLNADQEKF
QLEKQLVSVRGHLEEETHLKVENKKQKENLENKLFILEEELQQAKAKVTSLKRELEHSQN
EREDVSSHSAAMAGNLESRTRKIQELQEEVHKLSEQLSEVSRAKCEAVIQAEEAHSQEMQ
MKYREKRLEQEHGLLSRQMGVLQHQLELRAEESLNQRREHSSIILGLQTDVNHKTEEVRV
LKEEKAQLEKQLEEKSKKIQELLDTLNASRESEVKLEEAFRQELSAQKKLTDIYQASTQN
EKERAAELENGVEELRKLLQEASDQYGALESTKNKADEEHEQALRQSNLLVKDLKEELEK
VNMLLEANAKKGHGGYEELSPAANAASQLVSRGLSLTQLYSEYLSVSEKFMATEEENKRL
KRYVDQILQEIEERVPVLKKQRDDHQRSLETITSLHAQLDEALVELEKRRLEADEARRRT
NYLERENKRLDGQMRDLSKQVTILVSQVEAARAGLPPPPIPKDTSRSPTVAGDVISQRLV
AFRDIAELQEQNNNLRVSLRDLSEQMEAVQHTAVDAKTKELQEELESAKAQLKDLSAARE
RQETMMENLVHQRDMYRTLLSQQTPKTPGKPVPPSQTPQPSGEVSQQEIKKAHGELEKAK
KEINTIKKEHEDYRAERLKNEKMMQSDYDSLRATMEKTRNQNIKLVSQAEYNDERIKTLQ
NNNEVLQRQIASLEKNNTTLQGIVGRHEGSIETLRSEYMSLQKKLSRAEVTVENLREEKT
LLKESEARLLAERESLNQGQMSQAMVLANLESIKINLERRDSDGKMRYENQVATLTEQVC
RLKAKLASNSDLRAAENKVSELEGRIRAMHTEHSSTTKQLLEVRAELSATKSRMNDLQER
ARVIPSPGPRARGTSPMRGAMPFRMAGPSPQVRDLEMQLVEEKAKVNSLQGALDHSKRFE
KELLELNKKHEAQLAESNEACKTANEEYAKLQKELQATEAELTKLESQLRDAIEEGETAK
TLLKSKLAKTEDELQVCRKQLSDVNEALEKAKEDEEKSRKEAQEHSRIAAEVQDKYEREV
MLHGADLKALATLKERQAEYNTELQEATSTKLKAEEAVRDTRLGFEERENVLRRENKDLL
ARSHELEEQNKSILDQFTQLSDKMAAIQTKLTSSVGEAGSAPFTEDEARSSDQLREIIKF
LRREREVATGKCEVAQAENLRLESQRNVLKTQLDQVSKNLSEEREKNQVAADNAGHYSEL
LRKVHTLDALADSNRLMREEKEGLLSSNAEYKAKYETLEKQIEPLQEKQRLNINKIEALL
LEKKSLENEREMYRKRTQELVEKLNRAKPEDFVKLQQEVTEQQKLLQSRESEINRLKNQL
AQLSKNQQMIVNQKNQYQQQLHGVREELRKANEEVKKNLIEKNRLQQQHAEENKKTLSEK
ARLQQQLLQSQERVRGLESSSQQAQATHQQEMGNMLELKQREELQRHQLEMTKKEAENLA
EKLKDAEGKLAEAVKKADNFEKQSLQLRKIATKYKKAAEVGAPGGSGDGTDGEASTGSTV
VASSEKIKELEETISTLRQKHESTQEECTKLQQEITTIKQSLSSKELENGMLKSQSQQKD
GEVTKLRVELEGKTRELQIAQNLATQLKQNVSKQITDITKRLEESQSKKQLYENRINQLE
KERDQLAREVESHNKKLQMQQRQLENLQKQAAGASKPSTSGVSSEKSGFEPPPTANIKPM
NAPVAPSASPRSQAATQVVPPSRAIPTASIRPMAPPSGGSAPPQGSTVMVVSPLETHSDG
MVSSTVTLPQATVTPTPAISAPTILTTATTTPSATTTMTTTLTATVSPTPASASLTTPVA
SAVAIPSITASQSSSQSSTATQSTLASQSSAASQSTTVVVESTPATQSTAAAQSTPTTKS
SGLQTATATSSTVASQSTLANQSTPQTAIASTSVVAPIVSVATGASGAIAVASSKTPTAS
AAHIRQQESQEVSADALVSQAIALVSPLSSQEVAGPSGITSQKRKLESAEAVTNTKDAKR
SCLDEDALLSAEEAGPSSSHAEQENDDASQTPDNEEDVILLESDDENEEYADQGDDDEEE
EDEEEEEEEEDDEQMDDEDQDHGIHTIDTDDDEDDEAMEHDETTRECSQGLDAEAGQNTR
EAEEDLGNADAEAEAASQVSVDAEDSRGEAQETPSESERPQPSAGLSQPSSSSRGDGPAE
TSPRTPLVLPRPIVRQERLGSVGRQTLAPFSQLPQYDEGGDDSIVPSTPTLFVPRRGDGF
SEAVSSPQVPSAGFVFGSNTELSNPPQTSGLAQMAEGGLIDDTRIDLGQLDEGNRSQPST
PLHRSPTADLGAEGGVSTSEGDAMHREPPTVMVTEAEQSNEENSKDSEENFTEADSMAAE
VGEDVEDEEDDDAGAEADDDVIDLEEDDEGEEAEANRQAGEAEERIGGDSSSQPAQDVSS
VPSSTPSSLPSSSQQRRITPITWDESPRRIHRGRGLSMSRGGRGLLRTPAMGGRGFNPLM
HAPFLMRGGPQRARRSRPGPFPRGSPM
NT seq
7644 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgtctgaaggcgaggatttcttcgctctcgtttctatcgaggaaaaaggt
caaatatccgagaatttagccaaaaagctacaggatgtgtggacggcaaaacttaaagag
ctcacaaacttgaaggttgaaagtgagaaggagagacttaatgcagatcaggagaaattt
cagcttgaaaagcagctggtgagtgtccgtggccatcttgaagaagaaacccaccttaaa
gttgagaataagaagcaaaaagaaaatttagaaaacaaattgtttatattggaggaggaa
ctacagcaagccaaagccaaagttacttccctgaagcgggagttggaacattctcaaaat
gagagagaagatgtctcctcacattcagcggccatggcgggcaaccttgagtccaggacc
aggaagatacaagagcttcaggaagaggtacacaaactaagtgaacagctgagtgaggtg
agccgagctaagtgtgaagctgtgatccaggcagaggaagcacacagtcaggagatgcaa
atgaagtacagagaaaagagattggaacaagagcatggtttactatcacgccagatgggg
gtcttacaacaccagctggagctgagagcagaggaaagtctcaaccagcgccgtgaacat
tccagcattattcttggtcttcaaactgatgtcaatcataaaacagaagaggtgcgtgta
ctgaaagaagagaaagcccagctagaaaaacaactagaggagaaatctaaaaagattcag
gagttgcttgacactctgaatgcttcccgagaatcagaggtaaaactggaggaagctttc
cgccaagaactatctgcacaaaagaagctcacagatatatatcaagcatcaacacagaat
gagaaagaacgagctgctgaactggagaatggtgttgaggagcttcgtaaactgttgcaa
gaagccagtgatcagtatggagccttggagagtacaaaaaacaaggctgatgaagaacat
gagcaagctttacgtcagtcaaatttactggttaaagacctgaaggaagaattggagaag
gttaacatgttgcttgaagcaaatgctaagaaaggtcatggaggttatgaggagctgtca
ccagcagcaaatgcagcaagccagctagttagtcgaggtttaagcctcacacagctctac
tcggaataccttagtgtctcggagaaattcatggcaactgaggaagaaaacaaacgcctt
aagcgttacgttgatcaaatccttcaggaaatagaggaacgagttccagtattaaaaaag
caacgtgacgatcatcagaggtcactagaaacaattacttccctccatgcccagctggat
gaggctctcgtggaattagaaaaacggagattggaagcagatgaagctcgcagacgaaca
aactaccttgaacgggaaaataagcgactggatggtcagatgagggatcttagcaaacag
gtgaccattctggtgtcccaagttgaggcagcaagagcagggcttcctccacctcctatt
ccaaaagacacctccaggagtccaactgttgctggagatgttatttcccaacgcttagtt
gcctttagagacattgccgagttacaagagcagaacaataacttacgtgtctctttaagg
gatttgtcagagcagatggaagctgtacagcacactgctgtagatgcaaaaactaaagaa
cttcaggaggaacttgaatcagccaaggcacagttaaaggacttatctgcagctcgagaa
cgacaagaaacaatgatggaaaaccttgtacatcaacgtgacatgtaccgcactcttctg
tcccaacagacaccaaagactccaggtaaacctgttccaccaagccagactccacagcca
tctggggaggtctctcaacaggagatcaagaaggctcatggagaattagagaaggcaaag
aaagagataaataccataaagaaggagcatgaggattaccgggcagaaaggcttaagaat
gagaagatgatgcagagtgattatgatagtctcagagccactatggaaaaaacaaggaat
cagaacattaagcttgtatctcaggcagaatataatgacgagaggatcaagacgctgcag
aataataatgaggtcttgcagcggcaaattgcatccttggagaagaataatactacttta
caaggcattgttggccgccatgagggttcaatagagacacttcgtagtgaatacatgtct
ctgcagaagaaattatcacgggctgaagttactgtagaaaaccttcgagaagaaaaaact
ttgcttaaggaatcagaagcgagacttctggcagagcgagaatctcttaatcaaggacag
atgtctcaagcaatggtacttgccaatctagaaagtataaaaatcaatttggaacgcaga
gactctgatgggaagatgagatatgaaaaccaggttgctacactgactgagcaggtctgc
cgcctcaaggccaaattagcttcaaattctgatcttagagcagcagaaaataaagtgagt
gaactagaaggacgtattcgtgccatgcacactgaacattcatccaccaccaagcagttg
ctggaagtaagagctgaattatcagccactaagtcacgaatgaatgacctccaagagaga
gcaagagttataccatcaccaggacctagagcaagaggtaccagccccatgagaggtgca
atgccattccgcatggcaggaccttcaccacaggttcgtgatttggagatgcagctggtg
gaggagaaagctaaagtgaactcacttcagggtgctcttgaccattctaagcgctttgag
aaggaattgctggagctcaacaaaaagcatgaagctcagttagcagagtcaaatgaagct
tgcaagactgccaatgaagaatatgccaagttgcagaaagagctacaagcaacagaggca
gagctgacaaaattggagagtcagttgagggatgccatagaagagggtgagactgccaag
actttattgaaatcaaaattggccaagactgaagatgagctgcaagtgtgtaggaagcag
ctgagtgatgtaaatgaagcccttgagaaagccaaggaagatgaagaaaaatccaggaag
gaggctcaagaacattccagaattgcagctgaagttcaagataagtatgaaagggaagtg
atgctccatggagctgacctcaaggctttagcaactctgaaggagagacaggcagagtac
aacactgaactccaagaagccacctcaaccaagctgaaggcagaggaagcagtgagagat
actcgcttaggctttgaagaacgtgagaatgttttgcgtcgagagaataaggaccttttg
gctaggagccatgaactagaggaacaaaataagtctatcctggaccagtttacccaattg
tctgacaaaatggctgcaatccaaacaaagctgacatcatctgtgggagaggctggcagt
gcaccatttactgaagatgaagctcggtcgtcagaccagcttcgtgaaattatcaaattc
cttcgtcgggagcgagaagttgcaactgggaagtgtgaagtggcacaggcagagaacctg
agactggaatctcagagaaatgtcctcaaaactcagctggatcaagtatcaaagaacctc
tctgaagaaagagaaaagaaccaggttgctgctgacaatgctgggcactattcagaacta
cttcgtaaagtgcacactctagatgccctggcagatagtaatcgacttatgcgtgaagaa
aaggaaggcttattgagctctaatgcagagtataaggccaaatatgaaactcttgaaaag
cagattgaacctttacaagaaaaacagaggttaaatattaacaagattgaagctttgttg
cttgagaaaaaatctctggagaatgaaagggaaatgtacaggaagaggacgcaggagctt
gtggagaagctaaatcgtgccaaaccagaggacttcgtaaagctccaacaagaggtaaca
gaacaacagaaattactgcaaagtagagaatcagagataaacagactgaaaaatcagctg
gcacaactgtccaagaaccagcaaatgatagtgaaccagaagaaccagtaccagcaacag
ttacatggagtaagagaggaactgcgtaaggctaatgaagaagtcaagaagaacttgata
gagaagaatagattacaacagcagcatgcagaagagaacaagaaaactttatcagagaaa
gctcggctacaacagcagctgctgcagtcccaagaacgagtacgagggttggagtcatcg
tcacaacaggctcaggctactcaccaacaagagatgggcaatatgctcgagttgaaacag
cgggaagaattacagaggcatcagttggaaatgacaaagaaagaagcagaaaaccttgct
gaaaagttgaaggatgctgaagggaaactggctgaagctgtcaaaaaggctgacaacttt
gagaagcagtcgctgcaactacgcaagattgcaaccaaatacaagaaagctgctgaagtt
ggtgctccaggtggcagtggtgatggtactgatggtgaggctagcactggcagtacagta
gtagcaagctcagaaaagataaaagaattagaggaaaccatttctactctgcgtcagaaa
catgagagtactcaagaggagtgtaccaagttgcagcaagagattactactataaagcaa
tctttatcaagcaaggagttggaaaatggcatgttgaagtcgcagagtcagcagaaggat
ggagaagtgactaagctccgtgttgagcttgagggcaagacacgggagctacagattgca
caaaatttggccacacaactgaagcaaaatgtttctaaacagataacagacatcacaaag
agattggaggaaagccagagcaaaaagcaattgtatgagaatcgcattaaccagcttgaa
aaggagcgtgaccagctggcccgtgaagtagagtctcacaacaagaagctacaaatgcag
caacggcaactggagaaccttcagaagcaggcagctggggcttccaagccttctacaagt
ggtgtgtcatctgagaagagtggatttgagcctccccccacagcaaatattaaacctatg
aatgctccagtggctccatcagcctctccacggtcacaagcagccacacaagttgttcca
ccatcccgagccatcccgactgcaagtattcgcccaatggccccaccgtcgggaggctct
gcaccgcctcagggatcaactgtaatggtagtgtctccgttagaaactcacagtgatggc
atggtgtcttctactgtgactctacctcaggccacagtgacaccgacaccagccatatca
gccccaacaattctcactactgccaccacaacaccttcagccaccaccacgatgaccact
accctcactgcaaccgtgtctcccacaccagcttctgcttctctcactaccccagtggca
tcagctgtagctattccctccattacagcttcacagtcatcctcacagtcctcgactgcc
actcagtcaactcttgcaagtcagtcatctgcagcttcccagtctaccactgttgtagtg
gagtctacccctgctactcagtcaacagcagctgcacagtcaactccaactacaaaatca
tctggtttgcagacagctacagccacttcctcaacagtggcatctcagtccactttagcc
aatcagtctacaccacaaacagctatagccagtacttctgttgttgctccaattgtttca
gttgctactggagcatctggagccatagcagttgcttcgtctaagacaccaacagcttca
gcagcacacataagacaacaagaatcacaggaagtatcagctgatgctttggtatctcaa
gcaattgctcttgtaagtccacttagctcacaggaagtagctggtccttcaggcattacc
tcacaaaaaagaaagctagaatcagctgaagctgttactaatactaaggatgcaaaacgt
tcttgtctagatgaagatgctcttttatctgctgaagaagctggaccatcatcatctcat
gcagaacaggaaaatgatgatgcaagtcaaactcctgataatgaagaagatgtcattcta
ttggaatcagatgatgaaaatgaagaatatgctgatcagggtgatgatgatgaagaggag
gaggatgaagaagaagaagaagaagaagaagatgatgaacaaatggatgatgaggatcaa
gatcatggcattcacactattgatacagatgatgatgaagatgatgaggcaatggaacat
gatgaaactacccgagagtgcagtcaaggtcttgatgcagaggctggtcagaatacaaga
gaggctgaagaagatttgggaaatgctgatgcagaagctgaggcagcatctcaggtatca
gtggatgctgaagactctcgtggtgaagcacaagagacaccgagtgaaagtgaacgacct
caaccttctgcaggattaagccagccatcttcctccagtcgtggagacggtcctgctgag
accagtccacgaacacctcttgtacttccacgacctatcgtacggcaagaacgactcggt
tcagttggccgccagaccttagcacccttcagtcaacttccacaatatgatgaaggagga
gatgacagtatagtgccatcaacacctacactatttgttccaaggcgtggagatgggttt
tctgaagcagtcagctcaccacaggttccttcagctggatttgtgtttggatcaaacaca
gaattatccaatccaccacaaacaagtggcttagcacaaatggctgagggtggccttatt
gatgatacccgaattgacttggggcagttggacgaaggcaacagatctcaaccaagtacc
cctctccaccgttccccaacagctgatttaggggctgagggaggtgtaagcactagtgaa
ggagatgcaatgcaccgtgaaccacccacagtcatggtgacagaagctgagcaatctaat
gaagaaaactcaaaagactcagaagagaattttactgaggctgactccatggctgcagaa
gttggagaagatgtagaagatgaagaggatgatgatgctggagctgaagctgatgatgat
gtgattgacttggaagaggatgatgaaggcgaagaggcagaagcaaacagacaagcaggt
gaagcggaggagagaattggcggtgatagcagtagtcaaccagctcaggatgtttctagt
gtaccatcctccacacccagctctttaccatcttcctctcagcaacgaagaattacaccc
attacttgggatgaatctcctcggagaattcataggggtcgtggtttgtcaatgagtcgt
ggaggaagagggcttctgagaactcctgccatgggtggccgaggatttaatcctttaatg
catgcaccttttctcatgcgtggtggaccacagcgagctagaagatcacgtcctggacct
ttcccacggggttccccaatgtaa
DBGET
integrated database retrieval system
